ID AB038621; SV 1; linear; genomic DNA; STD; VRL; 3676 BP. XX AC AB038621; XX DT 04-APR-2000 (Rel. 63, Created) DT 02-NOV-2009 (Rel. 102, Last updated, Version 3) XX DE Torque teno virus 29 ORF2, ORF1, ORF3 genes, complete cds, isolate: DE TTVyon-KC009. XX KW . XX OS Torque teno virus 29 OC Viruses; Anelloviridae; Alphatorquevirus. XX RN [1] RP 1-3676 RA Mishiro S., Hijikata M., Takahashi K.; RT ; RL Submitted (24-FEB-2000) to the INSDC. RL Contact:Shunji Mishiro Toshiba General Hospital, Department of Medical RL Sciences; 6-3-22 Higashi Oh-i, Shinagawa, Tokyo 140-8522, Japan XX RN [2] RX DOI; 10.1159/000025034. RX PUBMED; 10971131. RA Takahashi K., Hijikata M., Samokhvalov E.I., Mishiro S.; RT "Full or near full length nucleotide sequences of TT virus variants (Types RT SANBAN and YONBAN) and the TT virus-like mini virus"; RL Intervirology 43(2):119-123(2000). XX DR MD5; 6af7374dd7778115e18894f0d878b0a4. DR EuropePMC; PMC3093127; 21441235. DR EuropePMC; PMC3302375; 22171250. DR EuropePMC; PMC434092; 15220423. DR EuropePMC; PMC4660652; 26623023. XX FH Key Location/Qualifiers FH FT source 1..3676 FT /organism="Torque teno virus 29" FT /isolate="TTVyon-KC009" FT /mol_type="genomic DNA" FT /note="TTV" FT /note="originally submitted as 'TT virus'" FT /note="type YONBAN" FT /db_xref="taxon:687368" FT CDS 403..789 FT /codon_start=1 FT /note="ORF2" FT /db_xref="InterPro:IPR004118" FT /db_xref="UniProtKB/TrEMBL:Q9JG77" FT /protein_id="BAA93582.1" FT /translation="MPWRPPGHNVPGRENQWFAAVFHSHASWCGCGDFVGHLNSIAPRF FT SNAGPPRPPPGLDQHNPEGPAGPGGPPAILPALPAPADPEPPPRRGGGADGGAAGGLAI FT ADAPGGYGEDDLDELFAAAAEDDM" FT CDS 666..2867 FT /codon_start=1 FT /transl_except=(pos:666..668,aa:Met) FT /note="ACG for ATG as start codon" FT /note="ORF1" FT /db_xref="GOA:Q9JG76" FT /db_xref="InterPro:IPR004219" FT /db_xref="UniProtKB/TrEMBL:Q9JG76" FT /protein_id="BAA93583.1" FT /translation="MAWWWGRWRRRWRPRYRRRTWRVRRRRPRRTFRRRRRGRYVSRRR FT RRRYYRRRLRRGRRRGRRKRHRQTLILRQWQPDVVRHCKITGWMPLIICGSGSTQNNFI FT THMDDFPPMGYSYGGNFTNLTFSLEGIYEQFLYHRNRWSRSNHDLDLARYKGTTLKLYR FT HHTLDYIVSYNRTGPFQISDMTYLSTHPALMLLQKHRIVVPSLLTKPKGKRSIKVRIKP FT PKLMLNKWYFTKDICSMGLFQLQATACTLYNPWLRDTTKSPVIASRVLKNSIYTNLSNL FT PEHNGARESIRNKLHPESLTGSVPNQKGWEYSYTKLMAPIYYQANRNSTYNWLNYQQNY FT SQTYQAFKQKMNNNLTLIQQEYMYHYPNSVTTDIIGKNTLTHDWGIYSPYWLTPTRISL FT DWGTPWTYVRYNPLADKGIGNAVYAQWCSEQTSNLDTKKSKCIMKDLPLWCIFYGYVDW FT IIKSTGVSSAVTDMRVAIISPYTEPALIGSSPEVGYIPVSDTFCNGDMPFLAPYIPVGW FT WIKWYPMIAHQKEVFEAIVNCGPFVPRDQTTPSWEITMGYKMDWLWGGSPLPSQAIDDP FT CQKPTHELPDPDRHPRMLQVSDPTKLGPKTVFHKWDWRRGMLSKRSIKRVQEDSTDDEY FT VAGPLPRKRNKFDTRAQGLQSPEKENYTLLQALQDSGQESSSENQEQAPQEKEGQKEAL FT MEQLQLQKQHQRVLKRGLKLLLGDVLRLRRGVHWDPLLS" FT CDS 2560..2904 FT /codon_start=1 FT /note="ORF3" FT /db_xref="UniProtKB/TrEMBL:Q9JG75" FT /protein_id="BAA93584.1" FT /translation="MMNMLQGLYQEKETSSIPEPKGSKAPKKKTTLYSKPSKTRGKRAA FT QKTKNKHPKKKRVRRKRSWSSSSSRNSTSESSSEASNSSSETFSDSAEESTGTPSCHNS FT GPLYPRPAFP" XX SQ Sequence 3676 BP; 1026 A; 1062 C; 871 G; 710 T; 7 other; cccccccccg ggaawggggg ggttcccccy ttgggggggt ttkgcccccc cggccccccc 60 ccgtgctaaa tccaccgccc atgcgcggcc aagcccccgc cgccattttg tgcagcccgc 120 caatttctgt tcaaacaggc caatgaggat cttctacgta cacttcctgg ggcgtgtctt 180 cgaggtctat aaaagcagag gcggtgacga atggcagagt tttttctagc ccgtccgcgg 240 cgagagcgcg agcaaagcga gcgatcgagc gtcccgtggg cgggtgccgt aggtgagttt 300 acacaccgaa gtcaaggggc aattcgggca cgggactggc cgggctatgg gcaagactct 360 taaaaaattc ccccgctctg ttctccggca ggacacaaag tcatgccgtg gagaccgccg 420 ggccataacg ttccgggtag ggaaaaccag tggtttgcag cagtttttca ctcgcatgct 480 tcttggtgcg gctgtggtga ctttgttggg caccttaata gcattgctcc tcgcttttct 540 aacgccggtc ccccgagacc acctccaggg ctagaccagc acaaccccga gggcccggcg 600 ggtcccggag gtccccccgc catcttgcca gctctgccgg ccccggcaga ccctgaaccg 660 ccgccacggc gtggtggtgg ggcagatgga ggcgccgctg gaggcctcgc tatcgcagac 720 gcacctggag ggtacggaga agacgaccta gacgaacttt tcgccgccgc cgccgaggac 780 gatatgtgag taggcggagg cgccgccgct actacaggcg cagactgaga cggggcagac 840 gcagagggcg acgaaagaga cacagacaga ctctaatcct cagacaatgg caaccagacg 900 ttgtcagaca ctgtaaaatt acaggatgga tgccccttat catctgtggc tcagggagca 960 cacagaacaa ttttataact cacatggacg acttccctcc catgggctac tcctacgggg 1020 gcaactttac aaacctcacc ttctccttag aaggcattta tgaacaattt ctgtaccaca 1080 gaaacaggtg gtctcgctcc aaccatgacc tagacctagc cagatacaaa ggcacaactc 1140 taaaactcta cagacaccac accttagact acatagtcag ctacaacaga acaggccctt 1200 tccagattag tgacatgacc tacctcagca cacaccctgc acttatgcta ctccaaaaac 1260 acagaatagt agtgcccagc ctactcacca aacctaaagg caagagatcc ataaaagtca 1320 gaataaaacc accaaaactc atgcttaaca aatggtactt caccaaagac atatgcagca 1380 tgggcctctt ccaactacaa gccacagcat gcaccctata caacccctgg ctcagagaca 1440 ccacaaaaag cccagtcata gcttccaggg tacttaaaaa cagcatttat acaaacctca 1500 gcaacctacc agagcataac ggagccagag agtccataag aaataaacta cacccagaat 1560 ccttaacagg atctgtacca aaccaaaaag gttgggaata cagctacaca aaactaatgg 1620 ctcccattta ctaccaagcc aatagaaaca gcacatacaa ctggctaaac tatcaacaaa 1680 attactcaca aacataccaa gcctttaaac aaaaaatgaa caacaactta acactaatac 1740 aacaagaata catgtaccac tacccaaaca gtgtwacaac agacataata ggcaaaaaca 1800 cacttacaca tgactggggc atatacagtc catactggct aacacccacc agaatcagcc 1860 tagactgggg aacaccttgg acatatgtta gatacaatcc actagcagac aagggcatag 1920 gcaatgctgt ctatgcacag tggtgctcag aacagaccag taacttagat acaaaaaaga 1980 gcaagtgcat aatgaaagac ctgccactgt ggtgcatatt ttatggctat gtagattgga 2040 taataaaatc cacaggcgtc agcagcgcag tgactgacat gagagtagcc atcattagcc 2100 cctacactga accagcactt atagggtcaa gtccagaggt aggctacatt ccagtaagtg 2160 acaccttttg caacggagac atgccgtttc ttgctccata catccctgtg ggctggtgga 2220 tcaaatggta ccccatgatt gcacaccaaa aggaagtgtt tgaagcaata gttaactgtg 2280 gaccgtttgt gcccagagac cagaccactc ccagttggga aattaccatg ggttacaaaa 2340 tggactggtt atggggtggc tctcccctgc cttcacaggc aatcgacgac ccctgccaga 2400 agcccaccca cgaactaccc gatcccgata gacaccctcg catgttacaa gtctctgacc 2460 cgacaaagct cggaccgaag acagtgttcc acaaatggga ctggagacgt gggatgctta 2520 gcaaaagaag tattaaaaga gtccaggagg actcaacaga tgatgaatat gttgcagggc 2580 ctttaccaag aaaaagaaac aagttcgata ccagagccca agggctccaa agccccgaaa 2640 aagaaaacta cactttactc caagccctcc aagactcggg gcaagagagc agctcagaaa 2700 accaagaaca agcaccccaa gaaaaagagg gtcagaagga agcgctcatg gagcagctcc 2760 agctccagaa acagcaccag cgagtcctca agcgaggcct caaactcctc ctcggagacg 2820 ttctccgact ccgcagagga gtccactggg accccctcct gtcataattc agggcccctc 2880 tatcccagac ctgcttttcc ctaacacaca aaaaaaaaag aaattttcca actacgactg 2940 ggtgtgcgag tacgagctgg ccaaatttat ggatcgccct ttgcggcaat acccatcaga 3000 cctccctcac tacccgtggc taccaaaaaa gcctcctacc ccttctacat gtagggtaaa 3060 tttcaaatta aagctcgatg tttaaaatgc aaggccgtgg gagtttcact tcatcggtgt 3120 ctacctctat aagtcactaa gcactccgag cgaagcgagg agtgcgaccc ccctgcccgg 3180 tagcaacttc ctcggggtcc ggcgctacgc cttcggctgc gccggacgcc tcggaccccc 3240 cctcgacccg aatcgctcgc gcgattcgga cctgcggcct cggggggttc ggggacttta 3300 ctaaacagac tccgaggtgc cattggacac tgagggggcg aacagcaacg aaagtgagtg 3360 gggccagact tcgccataag gcctttatct tcctgccatt tgtcagtgtc ttccgggttc 3420 gcgtgggggc cgccatctta gcttcggccg ccattttagg ccctcgcggg cctccgtagg 3480 cgcatattag tgacgtcacs gcagccatct tggctstgac gtcaaagtca cgtgggragg 3540 gtggcgttaa acccggaagt catcctcgtc acgtgacctg acgtcacagc cgccattttg 3600 tgctgtccgc catcttgtga cttccttccg ctttttgtaa aaaaaagagg aagtatgacg 3660 tagcggcggg gggggg 3676 //