ID AB033690; SV 1; linear; genomic RNA; STD; VRL; 3574 BP. XX AC AB033690; XX DT 21-APR-2000 (Rel. 63, Created) DT 19-SEP-2017 (Rel. 134, Last updated, Version 5) XX DE Japanese soil-borne wheat mosaic virus genomic RNA 2 for capsid protein, DE 64-kDa readthrough protein, 19-kDa cys-rich protein, complete and partial DE cds. XX KW . XX OS Japanese soil-borne wheat mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-3574 RA Shirako Y.; RT ; RL Submitted (19-OCT-1999) to the INSDC. RL Contact:Yukio Shirako University of Tokyo, Asian Center for Bioresources RL and Environmental Sciences; Yayoi 1-1-1, Bunkyo-ku, Tokyo 113-8657, Japan XX RN [2] RX DOI; .1006/viro.2000.0251. RX PUBMED; 10772992. RA Shirako Y., Suzuki N., French R.C.; RT "Similarity and divergence among viruses in the genus Furovirus"; RL Virology 270(1):201-207(2000). XX DR MD5; b13d39ab71f40165772e83ec516048b1. DR RFAM; RF01080; UPD-PKib. DR RFAM; RF01104; SBWMV2_UPD-PKb. DR RFAM; RF01111; SBWMV2_UPD-PKk. XX FH Key Location/Qualifiers FH FT source 1..3574 FT /organism="Japanese soil-borne wheat mosaic virus" FT /segment="2" FT /strain="Japanese" FT /isolate="JT" FT /mol_type="genomic RNA" FT /db_xref="taxon:2030954" FT CDS 330..860 FT /codon_start=1 FT /transl_table=1 FT /gene="CP" FT /product="capsid protein" FT /db_xref="GOA:Q9JGK0" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q9JGK0" FT /protein_id="BAA94799.1" FT /translation="MAVKNGYTGYNKELNLMASIHPFIRLSTLISQIEGWQATRASILT FT HLGVVLNGVSKLGERNFFSRQKRFGTHTQDGDEIFCDLGGEAVMQTIARLTVALQSARG FT EGSQTRNAKRGTAPTTNQVEGEEQGQTDQTLAISNALAEFMAFIHTKDFTMNECYTQSS FT FEAKFNLKWEGTS" FT CDS <861..2591 FT /codon_start=1 FT /transl_table=1 FT /gene="RT" FT /product="64-kDa readthrough protein" FT /db_xref="GOA:Q9JGJ9" FT /db_xref="UniProtKB/TrEMBL:Q9JGJ9" FT /protein_id="BAA94800.1" FT /translation="RDGVSGKLRAQIVEDFQNRLVLADDLGVFPRRNLDGEVIRDEPEI FT IYAELEDKLLSFESSVYHPKAVTVETEVAVLPKMQMDLELGVVADDVEMTVVTEVLIDE FT ESSYFWLYLLLLLLSTFLSCFIVLSRSFIHFLGNRSGRGGPFCRKIATLLWGARLWLLR FT RAARRYGSLGIVRKRYTRAGMRKYLRDYNFQLDEWESAVDCSPGEALIVADQRMFVRAV FT NKVVDLEGDFDTVESVKRVFRIYNVRNYKVEKWLDKHTIRSALVVLNNVVKDDNLTLGE FT GMLSLERASFDDVLGCDVEAQRNGMYFKDIIALQFAFRLVGTPEFSDFVIAYKGNLYPC FT YVDAIRRHSLILEKHHVDEDQKKRNEKALEWLLMAGQGAFVLSAVVSTGFAAVKIHKWI FT KSRMLLRALQMLPSVGGGGNDGGGGFSEEALQRFAVGRNFEERLAALHTGLDMAAENLE FT SFSPEDMQVEIQHVIQAHVEGSYHAADLPFLGNVPSAASVVVDSVADSSSVGSDVCSAD FT TSISLGVASGARRRAVASNTRMYPSAGVVSYGNFESPRVSGRSGIGSMKMKIASGPMAS FT " FT CDS 2658..3182 FT /codon_start=1 FT /transl_table=1 FT /product="19-kDa cys-rich protein" FT /db_xref="InterPro:IPR007609" FT /db_xref="InterPro:IPR016567" FT /db_xref="UniProtKB/TrEMBL:Q9JGJ8" FT /protein_id="BAA94801.1" FT /translation="MSACAFHSCDKCVDGPKNVVCVSKYRHSVYKVLGLTVVKCRLPSD FT CGVNCGMPAAFVLENGHPRLTLDGYCGEKHKGYVISGAWRHAQLRTLNEELDRLEKREE FT FLKTQIKLLSDSAKANTAPVYVPKKINRMKAEVWDVNDKIQDRSAALADVMDAVALDLS FT PDSSPRKSKPL" XX SQ Sequence 3574 BP; 913 A; 624 C; 982 G; 1055 T; 0 other; gtattattat cacattacgt tgagtgttaa ctcttcttgt gaaattacct ttcttaccag 60 gataagaaat aaaatatttt ctgggttgtc actgtttgga tacttagcgg agattgacat 120 ctcgctatct taggcccgca tctttgcgat aaatcctaag tagtcagctg ttaacgtgcg 180 acgttgagag gcattggcat ttcggctcgc tggataagtt aaccagactt aaaggtgagg 240 tcgataggtc actacagaag gcggcggata aggtaactgc ggagagcagt gatttgttgc 300 gaccaaaggt ggttgtacag ttaccttcaa tggctgtgaa aaatggttac acgggttata 360 acaaggagtt gaatttgatg gcttctattc atcctttcat caggttgagt actttgataa 420 gtcagattga agggtggcag gcaacacgag cgagcatact tactcatttg ggtgtagtac 480 tcaatggggt tagtaagttg ggtgagcgaa attttttctc tagacaaaaa aggtttggaa 540 cgcatactca agacggtgat gagatattct gtgatcttgg tggtgaagca gttatgcaga 600 ctatcgccag actcacggta gcactccaat ccgcaagggg agagggttcg cagaccagaa 660 atgcaaagag agggacagca ccaactacta accaggttga gggtgaagag caaggtcaga 720 cagatcagac gttggccatt tcaaatgcgc tggcagaatt tatggccttt atccacacta 780 aagatttcac gatgaatgag tgttatacgc agagctcttt tgaagctaag ttcaatctga 840 agtgggaagg tacaagttga cgggacggcg tctcgggaaa gttgagagcc cagattgtcg 900 aagacttcca gaataggctg gtgttggctg acgatttggg cgtttttccc agacgcaatc 960 ttgatggaga ggtgatacgt gatgagccgg aaattatata tgcggaactt gaggataaac 1020 tgttgagttt tgagagttct gtgtatcatc ctaaggctgt gacagtggaa actgaagtgg 1080 ctgttttacc gaaaatgcag atggatcttg aattaggtgt cgttgcagat gatgttgaaa 1140 tgactgtggt aactgaggtg ctcattgatg aggagagcag ttacttttgg ttatatctct 1200 tactccttct gctgtcgact ttcttatcgt gctttatcgt gttatctcga tcctttattc 1260 attttctggg gaacagaagt ggtcggggtg gtcctttctg ccggaaaatt gctacgttac 1320 tgtggggtgc gcggttgtgg ctgttgcgca gggcagctag gcgttacggc tctcttggaa 1380 tcgtcagaaa aaggtatacg cgcgctggta tgcgcaagta tttgcgtgat tacaattttc 1440 agcttgacga gtgggagagt gcggttgatt gctctccagg cgaagccttg attgttgcag 1500 atcaaagaat gttcgtcaga gcagtgaaca aggtcgtaga tctggaaggc gattttgata 1560 ctgttgaaag tgttaagaga gtttttcgga tctacaatgt gcgtaattac aaggttgaga 1620 aatggttaga caaacatacg atacgttcag ctcttgttgt gctgaataat gtcgtaaaag 1680 atgacaatct caccttaggt gaaggcatgc tgtcattgga aagagcgagc tttgatgacg 1740 tgttaggctg tgacgtcgag gctcagcgga atggcatgta cttcaaggat attattgctc 1800 ttcagtttgc ttttcgtctc gtgggcacac cggaattctc tgattttgtg atagcttaca 1860 aaggcaatct atacccatgc tatgttgatg cgatcaggag acatagtttg attttggaaa 1920 agcatcatgt tgatgaagat cagaaaaaga ggaacgaaaa ggcactggag tggctactca 1980 tggcaggaca gggcgctttt gtgttgtccg ctgttgtatc gacaggcttt gcggccgtga 2040 agattcataa gtggattaaa agtcgcatgc tcctgagagc gttgcagatg ctgccatctg 2100 taggtggcgg aggtaacgat ggtggtggtg gtttctcaga agaagctctt caaaggtttg 2160 cagtagggcg aaactttgag gagcgtctgg cggcgctgca cactggttta gatatggcag 2220 ctgagaacct agagagtttt tcaccggaag atatgcaagt tgagatccaa cacgttattc 2280 aagctcacgt cgagggttct taccatgctg cagatcttcc gtttttaggt aatgtgccta 2340 gtgcggcttc tgttgtagtg gattcagttg ctgattccag tagtgtcggc agtgatgtgt 2400 gtagtgcaga cacgtctatt tcgttaggcg tggctagtgg tgcaaggcgt cgtgctgttg 2460 ctagtaacac taggatgtat ccaagtgctg gtgttgtgag ttacggtaac tttgagtcac 2520 cgcgagttag tggtagaagt ggaattggta gtatgaagat gaaaatcgct agtgggccta 2580 tggcgtccta gcgtactgtt tttcattcta ctcactttca tttctattac gtcttcgcgt 2640 tttgatttta aagtaatatg tcggcctgtg cgtttcattc ctgtgacaag tgtgttgatg 2700 ggcccaaaaa tgttgtgtgc gtcagtaagt atcgtcacag tgtttataaa gttttgggtc 2760 tcactgttgt aaagtgtcgt ttgccttctg actgcggtgt caattgcggc atgcctgcgg 2820 cgtttgttct cgagaacgga catcctaggt tgactctcga tggatactgc ggtgagaagc 2880 acaaaggtta tgtgatttct ggtgcatggc gccatgcgca actccggact ttgaacgaag 2940 aacttgacag gttggaaaag agggaggagt ttttaaaaac tcagataaag ttgctcagtg 3000 atagtgctaa ggccaacact gctcctgttt acgttcctaa gaagattaat cgtatgaagg 3060 cggaggtctg ggatgttaat gataaaattc aggatcgtag cgctgctctt gcagatgtta 3120 tggatgctgt tgcgctggat ttatcgcctg acagttcacc aaggaagtct aaacctctgt 3180 gatgtatgtt ctgttgaaat actgtatgtg tgtatactgg agtaggtaac caggataaag 3240 aaccctagcg aaaatgtttt gaaaaaatat tctgtatgta tataaataaa tgggcaagtc 3300 tgttgctttg gctatagagt aatcatactc ttaaaacaat gacgtggtct tcacgataga 3360 agatggtgct tgttatttca cctaaatcga aataacgaaa gggcgttcca cagtacgttt 3420 aaactgtggg tttcaacctc tagttgctat tgatgtaata taaaaaagat caatattcga 3480 ctatgatgag gtgcgactgg gtgtcgcggc tgctattaca cagcagttag aaggggttca 3540 attccccccc cgaaccggag ggttatccgg ccca 3574 //