ID AB032750; SV 1; linear; genomic RNA; STD; VRL; 4629 BP. XX AC AB032750; XX DT 28-MAR-2000 (Rel. 63, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Natsudaidai dwarf virus PP2 gene for polyprotein, partial cds. XX KW polyprotein. XX OS Citrus mosaic sadwavirus strain ND-1 OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-4629 RA Iwanami T.; RT ; RL Submitted (24-SEP-1999) to the INSDC. RL Toru Iwanami, National Institute of Fruit Tree Science, Department of Plant RL Protection; Fujimoto 2-1, Tsukuba 305-8605, Japan RL (E-mail:tiwsw37@fruit.affrc.go.jp, Tel:81-298-38-6546, Fax:81-298-38-6546) XX RN [2] RX DOI; 10.1007/s007050170149. RX PUBMED; 11402866. RA Iwanami T., Kondo Y., Kobayashi M., Han S.S., Karasev A.V.; RT "Sequence diversity and interrelationships among isolates of satsuma RT dwarf-related viruses"; RL Arch. Virol. 146(4):807-813(2001). XX DR MD5; 63b63daf7270ad49872e736ab32a7620. XX FH Key Location/Qualifiers FH FT source 1..4629 FT /organism="Citrus mosaic sadwavirus strain ND-1" FT /isolate="ND-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:104661" FT CDS <1..4332 FT /codon_start=1 FT /transl_table=1 FT /gene="PP2" FT /product="polyprotein" FT /note="polyprotein including coat proteins" FT /db_xref="GOA:Q9JGK7" FT /db_xref="InterPro:IPR005306" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9JGK7" FT /protein_id="BAA92934.1" FT /translation="KVSTRGLTWKSVRAAQKAARKAAKYFGFSVSENPFSCLPSEGRSV FT AAGETPASLSVVLPQIDWAARKAASRKVPTVGTEDAPFLGLLPESPRLRDEGLLSLLRA FT KIATLVASRDRQVPVPRRVVKTQKKNSQCEFFTEEVRTTKCVINGKMGIPRNPIIQRLL FT PTRLIQRKRVVAKFEPQIVSSSRHKFDMSHIYDERRWVIYPSIIKIELKDAYQTAQNLG FT ILSDSASALERVRALSSHHLDLEREVRALEQEHYPAPRKTVAARIFSFFMEEYALAHEE FT AKERIRRQKEDKRREHLSFLRHLRRQAFELLAAERAAYLKKISEAREIAIALKERAEKG FT PPPQLLYIPEWHVVQHAKAHMEGTSYDRTLREHMCHRYDQKLAAFQNGSLSESSKFAAA FT CGAHFERIFGYAVHRSARTETVTQVAESSPPPVITAPVGRMVGGNPPTETPGTAAVRAA FT MQRAVERNRPGPRESSAMPAREPLLSHRGQYYARSLSDRYNNIFSRNNAYNLMRETDVP FT IMEFTFGQQQDIAIPLSSRFGNHPSLHIGELEIAVQSAVLSGVDTAMAIMVSDASHDRL FT EEGFLSLTILRLGAGWMRHTIPIGITVFPTDPLVDRLLRLSVLTGGSPMADGRQVARLH FT YGLLGQAYTGAGEQRLTQYATRRINVRQTHVTQFLEGNHIHIARSEDRQQPLPHMNLEY FT RPLSGSTRYVARPGGYQAVESGRQNIDITQNFIAMPTHLTRSATHRDTDVSEPANPNIK FT QGRANQPDNNEVPVSEEEPTGERRLPGGSAVHRGFTEFSERNENKIEHFYVPSMHGLSL FT KEDIHLFTKNLEIPSTADFCKELARYKVMAEAMNYRSASYYSRLLSGVAILRPHFKFVC FT RLVTPILESIPLMIVWDDLSQLTTKVSRLSSAFEIIDSDHTKAAIYEVRPSGPTDLLTP FT SKSHYGMGGDLVIFSGGYGSSALSSPLRLKIEASLLKDSQVGSGEVGVPQGPSSMLSFY FT YLNEVDIGDINLYSFLGSCKYDSKSVVNSRKYISICPAAGLVHSKGKAAYLGLTASLFS FT MYNFWKGSYILKVDVLSKGSCAGAISIYVPPPGTSADHYSQSQLDTLPRYELPWRGTGS FT ARFEVENFSWIGWHLTKPQRFVTNEDWFSLNAGVVVVLNQPPTTRAGGSSDIRVIFRIV FT KFKNLTLKERSTTCDIFTGIKDATYTSPLYDVLDNSISVPASVASDPDIELDATSSIQA FT SNVLPRSFGAYYAYLLGGAVSGKRWHSYVLPITMGHHRSEIGTTKTGYLNEKLDDTVRV FT RYSVRNPLHILCAAGAYYATDLLFTLVIDGDFASERAFAQLGLIQTPLMEYYDGYSTDR FT TLSSEGGHSNQLGVGKSYIQLLVPRRNYRARSITTETATLFFETIGSLSIRFTVSDKIK FT GVHLFVEAAGPIDVDGYGRGFDIGFTEESYVLMPSLRTAAQ" XX SQ Sequence 4629 BP; 1198 A; 1034 C; 1091 G; 1306 T; 0 other; aaggtctcta ctcgaggcct tacatggaaa tctgtgcgtg ctgcacagaa ggctgctagg 60 aaagcagcta aatattttgg gttttctgtt tcagaaaatc ctttctcctg cctcccgtct 120 gaagggagat cagttgctgc aggtgaaact cctgcttctc tctctgtggt tttaccacag 180 attgattggg ccgcccgtaa ggcggcctct cgtaaggtgc ctactgtggg cactgaggat 240 gcaccctttt tagggttgct cccggagtct ccccgcctcc gtgatgaggg gttgctctct 300 ttgctgagag ccaagatcgc cactcttgtg gcgagcaggg accgtcaggt ccctgtacca 360 aggagggtcg tcaagaccca gaagaagaac tcacaatgtg agttctttac cgaggaggtg 420 cgcactacaa agtgcgttat taacggtaaa atgggtattc cacggaatcc cataattcaa 480 cgccttctcc ccacccgctt aatccaaagg aagcgagttg tggccaaatt tgagccacag 540 atagtgagct cctcgagaca taagtttgat atgtctcata tttatgatga acgaaggtgg 600 gttatttacc catctattat caaaattgag ctcaaggatg cctaccaaac tgcacaaaat 660 ttgggcatcc tttcggacag tgcttccgct cttgagcgtg tgcgagccct ttcctctcac 720 catctagacc tagagaggga ggtgcgcgcg ctcgaacaag agcattatcc ggccccaaga 780 aaaactgttg ctgctagaat tttttccttc tttatggagg aatatgctct ggctcatgaa 840 gaggccaagg aacgcattag gcgacaaaaa gaagataagc ggagggagca tctctccttt 900 ctgcgacact tgagacgcca agcgttcgag cttttagctg ccgagcgagc cgcttatttg 960 aagaaaattt ctgaggctcg tgaaatagcc attgccctca aagaaagggc tgaaaaagga 1020 ccgccaccac aattattata cattcctgaa tggcacgttg ttcaacatgc aaaagcgcat 1080 atggagggta cttcatatga tcgcacgctt agagagcata tgtgccaccg ttatgatcag 1140 aagctagcag catttcagaa tggttctctc tctgagagtt ccaaatttgc tgctgcctgt 1200 ggggcgcatt ttgagcggat tttcggatat gctgtgcata gaagtgcacg aaccgaaacg 1260 gtgactcagg ttgctgagtc ttctccacca ccagtaatca ccgcacctgt agggcgaatg 1320 gttggaggaa atccacctac agaaacacca ggaacagctg ccgttagagc agctatgcag 1380 cgagcagttg aacgcaatag acctggcccc cgcgaatctt ctgcaatgcc ggccagagaa 1440 cccctacttt cacatagggg gcagtattac gctcgctcac tttcagatag atataacaat 1500 atcttctctc gcaataatgc atacaatctc atgcgagaaa ctgatgtgcc cattatggaa 1560 tttactttcg ggcaacagca ggatattgct atacctctgt cctcgcgatt tggaaaccat 1620 ccgtctctcc acattggtga attggaaatc gctgttcagt cagcggttct ttctggagtg 1680 gatacagcaa tggcaattat ggtctcagat gcttctcatg atagactcga agaaggtttc 1740 ttgagtctaa ccattttgag actaggtgct ggatggatgc gccacacgat ccctattgga 1800 attactgttt ttccaacgga tcctctagtt gatcgtcttt taagattatc agtattgact 1860 ggaggttctc caatggcaga cggtagacaa gtggccaggc tccattatgg tttgcttggc 1920 caggcttata ctggcgctgg cgagcagagg ttaactcagt atgccactcg aaggattaac 1980 gtgcgtcaaa cgcacgtaac tcaattcctt gagggcaacc atatacatat tgctcgctct 2040 gaggatagac agcagccgtt accccatatg aatttggagt atcggccact atctggaagt 2100 actaggtatg tggcacgacc tggtggatat caagctgtgg aaagtggtag gcagaacatt 2160 gatataacgc aaaatttcat agcaatgcct acgcacttaa caagaagtgc cacgcaccga 2220 gatactgatg tctcggaacc cgcaaatcca aacattaagc agggacgggc gaatcaacct 2280 gataataatg aagtccctgt ctcagaagaa gaaccaaccg gcgaacggcg cctccctgga 2340 ggttcagctg ttcacagagg atttacggaa ttctctgaga ggaacgaaaa taaaatagaa 2400 catttttacg ttccttctat gcatggactg tcactcaagg aagatattca tttatttacc 2460 aagaatcttg agataccttc tacagctgat ttctgtaagg aattggccag gtataaggtt 2520 atggcagaag ccatgaatta taggagcgcc agctattatt ctcgtctact gtccggggtt 2580 gcaattttgc gacctcattt caaatttgtg tgtaggctgg ttactcctat tctagaatct 2640 atacctctta tgatagtctg ggacgattta tcacaattaa caacaaaagt ctcccgatta 2700 tcatcagcct ttgaaattat tgattcagat cataccaagg ctgcaatata tgaggttcga 2760 ccatcagggc ccacggactt attgactccc tctaaaagcc attatggaat ggggggggat 2820 ctcgttatct tctctggtgg ttatggttct tctgcccttt cctcgccttt gagacttaag 2880 attgaggcga gtcttctcaa agactcgcaa gtaggttctg gcgaggttgg ggtgccccaa 2940 ggaccctctt ctatgttgtc attttattat cttaatgagg tggatattgg ggatataaat 3000 ttgtattctt ttctaggtag ttgtaaatac gattctaagt cagttgtaaa tagtagaaaa 3060 tatatttcta tttgtccagc agccggcctt gttcatagta aaggtaaggc cgcttattta 3120 ggtttaacag cttccctttt ttccatgtat aatttttgga agggaagtta tattttgaaa 3180 gtggatgttc tttcaaaagg gagttgtgct ggagcaatta gtatatatgt gcctcctcca 3240 ggtacaagtg ctgatcacta ctcccaatcg cagttggaca ccctcccacg atatgaatta 3300 ccttggaggg gaacgggatc tgccagattt gaggttgaaa atttttcctg gattggttgg 3360 catttgacca aacctcagcg tttcgtaacc aacgaagatt ggttttcatt gaatgctggg 3420 gtggtcgtgg tgctcaatca gccaccaaca acaagagctg gcggatcaag cgatataaga 3480 gtgatctttc gtattgtcaa attcaaaaac ctcactctta aagaacgatc cacgacctgt 3540 gatatattca caggtataaa ggatgcaact tatacttcac ctctgtacga tgtactggat 3600 aattccattt cagtaccagc ctcagttgca tccgacccgg acattgagct tgatgctacc 3660 tccagcattc aagcgagcaa tgtgctcccg agatcatttg gcgcatacta tgcgtattta 3720 ttgggtggag cagtgtccgg aaaaaggtgg cactcttatg tgctacccat aacgatggga 3780 catcatagga gtgaaatcgg cacgacaaag actgggtatc taaatgagaa acttgatgat 3840 acagtcagag tcaggtactc cgtgcgcaac ccattacata tcctgtgcgc cgcgggtgct 3900 tattatgcca ccgacctcct tttcactctc gtaattgatg gagattttgc atccgaacga 3960 gccttcgctc aacttggact catccaaact cctttaatgg agtattacga tgggtattcc 4020 actgatcgga ctctctcatc tgagggagga cactctaacc agttgggtgt gggcaagtca 4080 tatatccaat tacttgtccc aaggaggaat tatagggcta gatccattac cacggaaacc 4140 gcaaccttgt tctttgaaac gattggatcc ctttcaattc gattcactgt cagtgataag 4200 atcaagggag tccatttatt tgtggaggct gcgggcccta ttgatgttga tggttacggg 4260 agagggtttg acatcggatt cactgaggaa tcctatgttt taatgccctc tctccgtaca 4320 gccgctcagt agcggcatta ggtaatgcct gctggacctt aacgcaggat tgatcatatt 4380 gaggaattgg gaaagaattt ctagagttct ttttccttct ctatgtaggt gctgcccacc 4440 ggaccttgac gtgggttaat atgtaaatac tagtgtgtat tttctattta tttgttttgt 4500 ttgtttttct taaaataaac tggatttcaa aaagggtttc tcgagttctt ccctttccga 4560 tccaggaact ccgcgtgttt ttcttgattt ctgtcgcgtg cggttacgac cagtgaaagt 4620 ctggtgacc 4629 //