ID   AB030276; SV 1; linear; mRNA; STD; VRL; 2193 BP.
XX
AC   AB030276;
XX
DT   04-OCT-2000 (Rel. 65, Created)
DT   05-OCT-2000 (Rel. 65, Last updated, Version 2)
XX
DE   Turnip mosaic virus CIP mRNA for cylindrical inclusion protein, partial
DE   cds.
XX
KW   CIP; cylindrical inclusion protein.
XX
OS   Turnip mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-2193
RA   Ohshima K.;
RT   ;
RL   Submitted (26-JUL-1999) to the INSDC.
RL   Kazusato Ohshima, Saga University, Laboratory of Plant Virology, Faculty of
RL   Agriculture; 1-Banchi, Honjo-machi, Saga, Saga 840-8502, Japan
RL   (E-mail:ohshimak@cc.saga-u.ac.jp, Tel:81-952-29-8730, Fax:81-952-28-8709)
XX
RN   [2]
RX   DOI; 10.1007/s007050070100.
RX   PUBMED; 10963347.
RA   Kundu A.K., Ohshima K., Sako N., Yaegashi H.;
RT   "Cross-reactive and major virus-specific epitopes are located at the
RT   N-terminal halves of the cylindrical inclusion proteins of turnip mosaic
RT   and zucchini yellow mosaic potyviruses";
RL   Arch. Virol. 145(7):1437-1447(2000).
XX
DR   MD5; a4d88cbb43baf1f5418d9174fffbedd1.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2193
FT                   /organism="Turnip mosaic virus"
FT                   /map="CI"
FT                   /isolate="59J"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12230"
FT   CDS             <1..>2193
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CIP"
FT                   /product="cylindrical inclusion protein"
FT                   /db_xref="GOA:Q9E9R7"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR011545"
FT                   /db_xref="InterPro:IPR013648"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="InterPro:IPR039560"
FT                   /db_xref="UniProtKB/TrEMBL:Q9E9R7"
FT                   /protein_id="BAB16312.1"
FT                   /translation="EHIEPEEKAVVHQAKRQSEQELERVIAFIALVLMMFDAERSDCVT
FT                   KILNKLKGLVSTVEPTVYHQTLNDIEDDLSERNLFVDFELSSDGEILQQLPAEKTFASW
FT                   WNHQLSRGFTIPHYRTEGKFMTFTRATATEVAGKIAHESDRDILLMGAVGSGKSTGLPY
FT                   HLSRKGNVLLLEPTRPLAENVHKQLSQAPFHQNTTLRMRGLTSFGSAPISVMTSGFALN
FT                   YFANNRTKIEEFDFVIFDECHVHDANAMAMRCLLHECDYSGKVIKVSATPPGREVEFST
FT                   QYPVTISTEDTLSFQDFVNAQGSGSNCDVISKGDNILVYVASYNEVDTLSKLLVERDFK
FT                   VTKVDGRTMKVGNIEITTSGTPSRKHFIVATNIIENGVTLDIDVVADFGTKVLPYLDTD
FT                   NRMLSTTKTSINYGERIQRLGRVGRHKPGHALRIGHTEKGLSEVPSCIATEAALKCFTY
FT                   GLPVITNNVSTSILGNVTVKQARTMSVFEITPFYTSQVVRYDGSMHPQVHALLKRFKLR
FT                   DSEIVLNKLAIPNRGVNAWLTASEYARLGANVEDRRDVRIPFMCRDIPEKLHLEMWDVI
FT                   VKFKGDAGFGRLSSASASKVAYTLQTDVNSIQRTVTIIDTLIAEERRKQEYFKTVTSNC
FT                   VSSSNFSLQSITNAIKSRIMKDHTCENISVLEGAKSQLLEFRNLNADHSFTTKSDGISR
FT                   HFMSEYGALEAVHHQNTNDMSKFLKLKGKWNKTLITR"
XX
SQ   Sequence 2193 BP; 684 A; 476 C; 518 G; 515 T; 0 other;
     gagcatattg aacctgagga gaaggcagta gtgcaccaag cgaaaagaca atctgagcag        60
     gagctcgaac gagtgatagc ttttatcgcc ttagttctca tgatgtttga cgcagaacgc       120
     agtgattgcg tcacgaagat cctcaacaag ctgaaggggt tagtgtcaac tgtggaacct       180
     acagtttacc accaaacact taatgatatc gaagatgact tgagtgagag gaatctcttt       240
     gtcgactttg aacttagtag tgatggtgaa attctccagc agctcccagc tgagaaaacg       300
     tttgcttcgt ggtggaatca tcaattgagt agaggattca caatcccgca ctacagaaca       360
     gaaggaaagt ttatgacctt caccagggca accgccacag aagttgcggg taagatagca       420
     catgagagtg atagagatat actcctcatg ggagcggtgg gatcaggcaa gtcaactggt       480
     ttaccatatc acctttccag aaaggggaat gtattgcttc tcgaacccac tcgaccactc       540
     gcagaaaacg tgcacaagca attgtcgcag gcaccatttc atcagaatac gactcttcga       600
     atgcgtggat tgacatcgtt tggatcggca ccgatctcgg tgatgactag tggtttcgca       660
     cttaactatt tcgcaaacaa tcgaacgaag attgaagagt ttgactttgt catattcgat       720
     gaatgtcatg ttcacgacgc taatgcaatg gcgatgagat gtttgctaca tgagtgcgac       780
     tactccggca aggtcataaa ggtttccgcc acaccaccag gtcgcgaggt tgaattctcc       840
     actcaatatc ctgtgacaat tagcacagaa gacacattgt catttcaaga ctttgtgaat       900
     gcacagggta gtggaagtaa ctgcgacgtg atctcaaaag gagacaacat cctcgtatac       960
     gtagcaagct acaacgaggt ggacacactt tcaaagcttc tagtcgagcg tgatttcaaa      1020
     gttacgaaag ttgacggaag aacaatgaaa gtcggaaata ttgaaatcac cacgagcggg      1080
     acacctagta ggaaacactt catagtcgca accaacatta ttgagaacgg ggtcaccctg      1140
     gatattgatg ttgttgccga ctttggaaca aaagtactcc cgtatcttga cacggataat      1200
     agaatgctta gtacaacgaa aacaagcatt aattatgggg agcgaatcca aaggctaggg      1260
     agagttggaa gacacaagcc aggccacgct ctgagaattg gccacacgga gaaagggctg      1320
     agtgaagttc caagctgcat tgcaacagaa gcagccctaa agtgttttac gtatggactt      1380
     ccagttataa ccaacaacgt gtctacaagc attctaggca atgtaacggt gaaacaggca      1440
     cgaacaatgt ctgtgtttga aataacaccg ttctacacaa gccaagtggt tagatatgat      1500
     ggctcgatgc atcctcaggt ccatgcgctt ttgaagaggt tcaagctcag agattctgaa      1560
     attgtcttga acaaattagc catacctaac cgaggagtaa atgcttggct cacagctagt      1620
     gagtatgcac gacttggtgc aaacgttgag gacaggcgtg acgtacggat ccctttcatg      1680
     tgtcgagaca tcccagagaa actccatcta gagatgtggg atgtgattgt caagttcaaa      1740
     ggcgatgcag gtttcgggcg actttcaagc gccagcgcaa gcaaggtagc ttacaccttg      1800
     caaacagacg tcaactccat ccagcgaaca gtcactatta tagatacact aatcgctgag      1860
     gagagaagga agcaggagta cttcaaaaca gtaacctcta actgtgtctc ttcttcaaac      1920
     ttctcactac agagcatcac aaatgccata aaatctcgta taatgaaaga tcacacgtgc      1980
     gagaatatat cagtgcttga aggagcaaag tcacagttac tcgagttcag aaacttaaac      2040
     gctgatcact cgttcactac taagtctgac gggatttctc gccattttat gagtgaatat      2100
     ggagcactcg aggcagttca ccaccaaaac accaacgaca tgagcaagtt cttaaagctg      2160
     aagggcaaat ggaacaaaac gcttatcacg cgt                                   2193
//