ID AB028604; SV 1; linear; genomic DNA; STD; VRL; 2761 BP. XX AC AB028604; XX DT 25-MAY-2000 (Rel. 63, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Tobacco leaf curl Japan virus V1, V2, C3, C2, C1, C4 genes, complete cds. XX KW . XX OS Tobacco leaf curl Japan virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2761 RA Ikegami M.; RT ; RL Submitted (07-JUN-1999) to the INSDC. RL Masato Ikegami, Tokyo University of Agriculture, Nodai Research Institute; RL 1-1 Sakuragaoka-1, Setagaya-ku, Tokyo 156, Japan RL (E-mail:ikegami@nodai.ac.jp, Tel:03-5477-2537, Fax:03-5477-2634) XX RN [2] RX PUBMED; 10585147. RA Shimizu S., Ikegami M.; RT "Complete nucleotide sequence and the genome organization of tobacco leaf RT curl geminivirus from Japan"; RL Microbiol. Immunol. 43(10):989-992(1999). XX DR MD5; de087a5040d7a93f6f16cc0772a87905. XX FH Key Location/Qualifiers FH FT source 1..2761 FT /organism="Tobacco leaf curl Japan virus" FT /mol_type="genomic DNA" FT /db_xref="taxon:223332" FT stem_loop join(1..19,2754..2761) FT CDS 146..496 FT /codon_start=1 FT /gene="V1" FT /product="precoat protein" FT /db_xref="GOA:Q9JH40" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9JH40" FT /protein_id="BAA95782.1" FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVESTYSPDTVGFDLIRDL FT ILVVRAKNYVEASCRYRDFHSRLQSTAPSELRQPVCQPCECPHCPRHKQKEIMGPKAHL FT SEAQDVQNVSKP" FT CDS 306..1073 FT /codon_start=1 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:Q9JH39" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9JH39" FT /protein_id="BAA95783.1" FT /translation="MSKRPADIGIFTPVSKVRRRLNFDSPYANRASAPIALATNRRRSW FT AQRPIYRKPRMYRMYRSPDVPKGCEGPCKVQSYEKKNDVGHSGTLLCVSDITRGNGLTH FT RLGKRFCIKSVYIIGKIWMDENIKMKNHTNNVLFWLVRDRRPGTTPYGFQEAFNMFENE FT PSTATVKQELRDRLQVLHRFRATVTGGQYASKEQAIIKRFWKLNHHVTYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSV" FT CDS complement(1076..1480) FT /codon_start=1 FT /gene="C3" FT /db_xref="GOA:Q9JH38" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9JH38" FT /protein_id="BAA95784.1" FT /translation="MDSRTGDTITAAQAWNGAYIWTVPNPLYFKITNHAQRPFNMDQDI FT ITIQIQFNHNLRSQLDLHKCFLTFKIWTHLQPLTSYFLNVFSKRVLEYLDNLGVISINN FT VIRAVDYVLYDVLRGTQYVQQSSDIKFKLY" FT CDS complement(1221..1628) FT /codon_start=1 FT /gene="C2" FT /db_xref="GOA:Q9JH37" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9JH37" FT /protein_id="BAA95785.1" FT /translation="MRPSSPSTAHSTQLPIKVQHKLGKKRAPRRRRIDLNCGCSIYVAL FT GCANHGFTHRGHHHCSSGMEWRVYLDSAKSPIFQNHEPRSTTVQHGSGHNNNTDSVQPQ FT PQISTGSTQVLPDLQDLDSLTTSDFLFLECI" FT CDS complement(1528..2619) FT /codon_start=1 FT /gene="C1" FT /product="Rep protein" FT /db_xref="GOA:Q9JH36" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9JH36" FT /protein_id="BAA95786.1" FT /translation="MAPPKRFQINAKNYFLTYPHCSLTKEEALSQIQALDTITNKLFIR FT ICRELHEDGSPHLHVLIQFEGKYKCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYM FT EKDGDVVDYGVFQVDGRSARGGCQSANDAYAEAINSGSKSAALSILREKAPKDFVLQFH FT NLNSNLDRIFSPPLEEFVCPFLSSSFDRVPEELEEWAAENARDSAARPWRPISIVIEGD FT SRTGKTMWARSLSPHHNYLCGHLDLSPKVYSNSAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEDKNAALKAWAIKNASFVTLYGP FT LYSTSHQGSAQIREEESTSQTED" FT CDS complement(2169..2462) FT /codon_start=1 FT /gene="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9JH35" FT /protein_id="BAA95787.1" FT /translation="MGALISTFSSSSRENTSARIKDSSTSSPQLGQHISIRTFRELRAR FT QTSKPTWRKTETSLIMEFSRSMEDQLEEVANLPTTLMPRQSTQALNQRPCLY" XX SQ Sequence 2761 BP; 736 A; 551 C; 630 G; 844 T; 0 other; tataatatta ccggatggcc gcccgaaatt tcgtggtggg cccccccttg tcgaccaata 60 gagttcgtgc cttgaaagtt agataagtgg atgttgacgt cacttttgtc tttatatacg 120 tcagccctaa ttttaaaggt taaagatgtg ggatccttta cttaatgatt tccctgaaac 180 cgtacacggt tttaggtgta tgttagcggt taaatacctt cttcttgttg agtctacata 240 ctctccggat acggtgggtt tcgatttgat acgtgatctt atactcgttg ttcgtgcgaa 300 gaactatgtc gaagcgtcct gcagatatag ggattttcac tcccgtctcc aaagtacggc 360 gccgtctgaa cttcgacagc ccgtatgcca accgtgcgag tgcccccatt gccctcgcca 420 caaacagaag gagatcatgg gcccaaaggc ccatctatcg gaagcccagg atgtacagaa 480 tgtatcgaag ccctgatgtg cccaaggggt gtgaaggtcc gtgtaaggtc cagtcatatg 540 agaagaaaaa tgatgttggt cattctggta ctctgctttg tgtatccgat attacccgtg 600 gtaatgggct tactcatcgt cttgggaaga gattttgtat aaaatctgtt tatataattg 660 gtaaaatatg gatggatgag aatattaaga tgaagaatca cactaacaac gtgttattct 720 ggttagttag agatagacga cctggtacaa ctccttatgg atttcaggag gcattcaata 780 tgtttgagaa cgagcccagc acagcaactg ttaaacagga attaagagat cgtttgcagg 840 ttttacacag attccgtgcc actgttactg gtggacaata tgcgtctaag gaacaagcga 900 tcataaagcg tttttggaag ctcaatcatc atgttactta taatcatcag gagcaggcta 960 aatatgagaa tcatactgaa aatgctttat tattgtatat ggcttgtaca catgccagta 1020 atcctgtgta tgctactcta aagatcagag tgtatttcta cgattcagta taaaattaat 1080 aaagtttgaa ttttatatca cttgattgtt gtacatactg tgttcctctc aatacatcgt 1140 ataatacata atcaactgcc ctaattacat tgttaattga aattacaccc aaattatcta 1200 aatactctag tacacgttta ctaaatacat tcaagaaata agaagtcaga ggttgtaagt 1260 gagtccagat cttgaaggtc aggaagcact tgtgtagatc cagttgagat ctgaggttgt 1320 ggttgaactg aatctgtatt gttattatgt cctgatccat gttgaacggt cgttgagcgt 1380 ggttcgtgat tttgaaatat aggggatttg gcactgtcca gatatacgcg ccattccatg 1440 cctgagctgc agtgatggtg tcccctgtgc gtgaatccat ggttagcaca acctagagcg 1500 acgtaaatag aacaaccgca gtttaagtca atcctccgtc tgcgaggtgc tctcttcttc 1560 cctaatttgt gctgaacctt gatgggaagt tgagtagagt gggccgtaga gggtgacgaa 1620 ggacgcattt ttaattgccc atgcttttag tgctgcgttc ttgtcctcat ctaaatactc 1680 ggtgtatgat gacgttgggc ctggattgca gaggaagatt gttgggatac cacctttaat 1740 ttgaattggt ttcccgtact tggtgttgct ttgccagtct ctttgggccc ccatgaattc 1800 tttaaagtgc tttagatagt ggggatccac gtcatcaatc acgttgtacc aagcactgtt 1860 gctgtaaacc ttggggctta agtcaagatg gccgcaaagg taattgtgat gtgggctcaa 1920 cgacctggcc cacatggtct tccctgtcct gctatcccct tcaatcacaa tgcttatggg 1980 cctccacggc cgcgcagcgg aatccctggc gttctctgca gcccattcct cgagttcttc 2040 cggaactcga tcaaaggaag aagaaagaaa aggacaaaca aattcctcca acggaggact 2100 aaaaatccta tctaaattac tatttaaatt atgaaattgt aaaacaaaat ctttgggagc 2160 tttctccctt aatatagaca aggccgctga tttagagcct gagttgattg cctcggcata 2220 agcgtcgttg gcagattggc aacctcctct agctgatctt ccatcgacct ggaaaactcc 2280 ataatcaacg acgtctccgt ctttctccat gtaggctttg acgtctgacg agctcttagc 2340 tccctgaatg ttcggatgga aatgtgctga cctagttggg gagacgaggt cgaagaatct 2400 ttgattcgtg cacttgtatt ttccctcgaa ctggatgaga acgtggagat gagggctccc 2460 atcttcgtgt agttctctgc aaattctgat gaataattta tttgttatag tatctagggc 2520 ttgtatctga gagagtgcct cttcttttgt taaggagcag tgagggtaag tgaggaaata 2580 atttttggca tttatttgaa atcgttttgg aggagccatt gacttggtca attggtacca 2640 attgatctct tctctggtat cggtacattg gtaccaatat atagtctggt accaaatggc 2700 attattgtaa ttaataaagt aatttgaaat tcaaaattca aattggtaaa gcggccatcc 2760 g 2761 //