ID AB023780; SV 1; linear; genomic RNA; STD; VRL; 2590 BP. XX AC AB023780; XX DT 05-NOV-1999 (Rel. 61, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 5) XX DE Rice grassy stunt virus RNA, segment 6, complete sequence. XX KW . XX OS Tenuivirus oryzabrevis OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-2590 RA Shirako Y., Miranda G.J.; RT ; RL Submitted (16-FEB-1999) to the INSDC. RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and RL Environmental Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5800-5192, Fax:81-3-5800-5192) XX RN [2] RX DOI; 10.1006/viro.1999.0068. RX PUBMED; 10612657. RA Miranda G.J., Azzam O., Shirako Y.; RT "Comparison of nucleotide sequences between northern and southern RT philippine isolates of rice grassy stunt virus indicates occurrence of RT natural genetic reassortment"; RL Virology 266(1):26-32(2000). XX DR MD5; 63a6b936c39c518e5bdedb01eb2063e2. XX FH Key Location/Qualifiers FH FT source 1..2590 FT /organism="Tenuivirus oryzabrevis" FT /segment="6" FT /isolate="South Cotabato" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052762" FT CDS 75..614 FT /codon_start=1 FT /gene="p6v" FT /db_xref="InterPro:IPR006960" FT /db_xref="UniProtKB/TrEMBL:O36171" FT /protein_id="BAA86111.1" FT /translation="MSKSHSDVVGTVSGLNYRLFYDMIPDRISQKLRLREITDPKTCNA FT SKIPLVLKAAEEVSRMDIDHDKDGYTKVQVKMPEYMKAYLEEMLSASNSTTTGISYSVF FT LVYMQDKCGDWITEHYLKNVHSMSKQQLHELITGIIETFSSDDIEDEHYDDLICKIPAY FT VYNIVLRYIDMSGLTT" FT CDS complement(1534..2511) FT /codon_start=1 FT /gene="p6vc" FT /db_xref="GOA:Q9QN99" FT /db_xref="InterPro:IPR004980" FT /db_xref="UniProtKB/TrEMBL:Q9QN99" FT /protein_id="BAA86112.1" FT /translation="MALLQKLGSSKVSSKRMSPAMIPLDSINQDLVDPQQEKDAKNKKE FT GKKKDLDVSMDPLTGKLPLGKKKQVDTGGIAYLENALMQLDLHDFSFDSIRPRTKTFHM FT KRQHFKISTVNSRFRLDVEKTGLFSKTLKYSRICTLCLAFLGIKNRAQGTISFTFRDLS FT YLSENDQIDFKVKNRISKSFAAIASFPAPIFNDDLGNLICDFEIENASVNGVVIGDLLV FT LLGIEQSDLPVCYEPQKAKIFEYKPLTEKGLNKISNFAGYVDNVLRAAINHREGEDDGF FT STEGLGVLVHPRVKQIDNSIPIKSLENKPQKMLMRDGSYLDVNP" XX SQ Sequence 2590 BP; 828 A; 463 C; 447 G; 852 T; 0 other; acacaaagtc ctgggcaatt acaaacaaga aaaacttaat taaatactaa ggtttacttt 60 ttcttcaaat aggtatgtct aaatctcatt ctgacgttgt gggcactgtg tctggtctta 120 attatagact attttatgat atgattcctg ataggatatc tcagaaactc agattaaggg 180 agataactga tccaaagaca tgcaacgcaa gtaaaatacc cttagtgctc aaagctgctg 240 aggaagtgtc taggatggat atagaccatg ataaggatgg ctacacaaag gtccaggtta 300 aaatgcctga gtacatgaaa gcttacctgg aagagatgct cagtgcaagc aactcaacta 360 ccactggtat ctcctatagt gtgttcttag tatacatgca agacaagtgt ggtgactgga 420 taacagaaca ttacctaaag aatgttcact ctatgtcaaa gcaacaattg catgaactga 480 ttactggaat aattgaaacc ttcagttcag atgacataga ggatgagcac tatgatgatt 540 taatatgcaa gatccctgct tacgtataca atattgtcct tagatacata gatatgagtg 600 gcttaacaac atgaaactca ttactcacca ttataagagg ctatagagag atatataatg 660 ttgtcaataa caaacattat ataataagat aatgaataga aaataaaaaa atgaaacaat 720 acaaagtcta gcttgtgtag ctcataaaat atgaacttat aattaataat caatgagaca 780 tcaataatta gaaccaataa aaacattatc aatgaaacta acatatataa aatgaaggaa 840 agaaaataat taaaaacctg aaaagagaaa ggtgttgggg aaagaggagg taagaatggt 900 gagaaataag gaaaggaaaa gaagatgaaa gggagtaaat acaagtaata aataaatgaa 960 taataagttc cagataatgc catatgaata atttaagaag atatcatgaa aacaaactag 1020 tgaactaaga acaaaaaaac agaaaagaaa gaaaactaaa aaagtactac tagcttcggc 1080 tagtatccca ttccatttca tcatatcttg gttcattccc tactaggtgc ataacgatca 1140 attgggcttc tacattgtca gagggttccc taatttccta ttctggagat ctacttattt 1200 aaattaaaat taaattatgt tggatgctgg ccgaagccag tgagtgttat accatgacaa 1260 gggaaacaag caacatttat cttgacaact actaactaca ttaagttatt tgaaacaaca 1320 caacattcac tcaccagtta ttcccatttt tttgtatttt tttgcagtta tctcttttcc 1380 ttgttttttt gtttttttgt tcttttgttt tatctattat tctacttttt ttgttctttt 1440 catatttttc tctctttttt tgtttttttg tctgtctttt ttagtcctga ttcctgctct 1500 cctcttccct tagtttattt gttcttgtcc cacttagggg ttaacatcta gatatgagcc 1560 atctctcatc aacatcttct gaggtttgtt ctccagactt tttataggaa tggaattatc 1620 aatttgtttc accctagggt gaacaaggac tcctaaaccc tctgtgctga acccgtcatc 1680 ttcaccttcc cgatggttta tagcagccct gaggacatta tctacatacc cagcaaagtt 1740 cgatatctta tttaaccctt tctcagtgag tggtttatac tcaaagattt ttgctttctg 1800 tggttcatag cagactggca ggtcagattg ttctatgccg agaagaacca atagatctcc 1860 tatcaccact ccattgacag atgcattctc aatctcaaag tcacagatta gatttcctaa 1920 atcatcattg aatattggtg ctggaaatga tgctattgca gcaaaactct tgctgattct 1980 gtttttgacc ttaaagtcta tttgatcatt ctcggacagg taagacaagt ctctaaaagt 2040 aaaagaaatt gttccttgag ctctattttt gatccctaga aaagccagac acaacgtgca 2100 gatcctgctg tatttgagag tcttggaaaa gagacctgtc ttctccacgt caagtctgaa 2160 tctgctatta acagtgctta ttttgaaatg ctgtcttttc atgtggaagg tttttgttct 2220 tggcctaatg ctatcaaagc tgaagtcatg taggtccagt tgcattaaag cattttctag 2280 gtaagcaatt cctccagtgt ccacctgttt cttctttcct aggggtagct taccggttaa 2340 aggatccatg gaaacatcta gatccttctt cttaccttcc ttcttattct ttgcatcttt 2400 ttcctgttgt gggtccacta ggtcttgatt tattgaatca agaggtatca tagcgggtga 2460 cattctcttg gaactcacct tacttgaacc tagcttttgg agtaaagcca tttttttaca 2520 gaatgtgaaa aaagatttcc tttatcaata tgtaagtttt tcgcttttca aagatgccca 2580 gactttgtgt 2590 //