ID AB023777; SV 1; linear; genomic RNA; STD; VRL; 4069 BP. XX AC AB023777; XX DT 05-NOV-1999 (Rel. 61, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 4) XX DE Rice grassy stunt virus RNA segment 2, complete sequence. XX KW . XX OS Tenuivirus oryzabrevis OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Phenuiviridae; Tenuivirus. XX RN [1] RP 1-4069 RA Shirako Y., Miranda G.J.; RT ; RL Submitted (16-FEB-1999) to the INSDC. RL Yukio Shirako, University of Tokyo, Asian Center for Bioresources and RL Environmental Sciences; 1-1-1 Yayoi, Bunkyo-ku, Tokyo 113-8657, Japan RL (E-mail:shirako@ims.u-tokyo.ac.jp, Tel:81-3-5800-5192, Fax:81-3-5800-5192) XX RN [2] RX DOI; 10.1006/viro.1999.0068. RX PUBMED; 10612657. RA Miranda G.J., Azzam O., Shirako Y.; RT "Comparison of nucleotide sequences between northern and southern RT philippine isolates of rice grassy stunt virus indicates occurrence of RT natural genetic reassortment"; RL Virology 266(1):26-32(2000). XX DR MD5; 803dc60e794fd1fbaecf2b47906f01d2. XX FH Key Location/Qualifiers FH FT source 1..4069 FT /organism="Tenuivirus oryzabrevis" FT /segment="2" FT /isolate="South Cotabato" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052762" FT CDS 210..812 FT /codon_start=1 FT /gene="p2v" FT /db_xref="InterPro:IPR007974" FT /db_xref="UniProtKB/TrEMBL:Q9QNA4" FT /protein_id="BAA86105.1" FT /translation="MSISIPASEYQSSKTYSQLLMTFRDMVSEEQYKVIKERMVENNKH FT YYALDKFSQGVYDIKDMQILVADLSWLCAFDKSSDQRTRETLVMISKCVLDIMLSLKPE FT VSQTKCFVCDKKSTYETDNLSVARLDDVSNRFSGGSVHYMVKLKEHDKVGLISYIHELK FT KIGGYRGWYRDGGKLRHEYIVYTDAKPIMREKFAPVC" FT CDS complement(1394..3862) FT /codon_start=1 FT /gene="p2vc" FT /db_xref="GOA:Q9QNA3" FT /db_xref="InterPro:IPR009547" FT /db_xref="UniProtKB/TrEMBL:Q9QNA3" FT /protein_id="BAA86106.1" FT /translation="MGLLVITFALALLELSETKSLYTQVIYHDEGDRITSSFSCNYYDC FT NEGISICSRARYTSGYYLEKTGLNTAGLCRTDTTKCCGKMDKFSDNVILRSTSIRRVDD FT IFINECNRWILRRHVKMTIKTTPIDTKDMDSRSLRKGTYDQFILSAESLEVCVHKNGEY FT DSKIIVKCIDGILTSSEKNCKLWIDHTEFEFTDCTSRQLPLYTDVVNVAFNDVYRSVKC FT EATNICSMHDRMDFWLRLKHWDCNKGFVWFLYSGIALIIITVIFTIIGLIKYYLIIVPT FT NFVFRIMKKLIPNPFKLMKRRRSDYNAHELVRVKQDELSNLADENVKDVDSDKGKTLPT FT RYRMRDGTYLTVGIILVFLPLVLGSCRDGVDSITSLSTCNSYACRSVTTINLKFRSMGD FT ETCLSFKDANLKIRVLGISMRCNSRVIYYTRKYKYVITRDDYKCFTGPDCSLNPPKSIW FT DDEEQYLHHDYCKYENVGVFSCGVPFIRSSHWQRMKVESGDKLICSAEECQEFQPYIVL FT VITMGTNQTIAEISSSVYKGNGYTMTLDSTTPVLLPTKFVRCGGELFKVNFNDLGDLSD FT DHYGSLQCPDHDSAYELSKKCEIKYQHIYEHTSNIMVDSGDSKLTGTNTTNNDLEHLEP FT LFGGYQISTDQMWPITIQIKTLKELVQEHESDFVGSISKCSIKGVSRLIGGAIINLYIE FT SERIGWGLLTCEDLSSFRFNVEGLGFQKFSKHISVYTHTSSDVKVNCNMTTGRGVRRVV FT CETSLREHTIEVSSDKNNIENGMVQFRSDQPLVKFLIEFVEDNPKTSIVSASVVIMYVS FT RILIEKVNNK" XX SQ Sequence 4069 BP; 1354 A; 740 C; 668 G; 1307 T; 0 other; acacaaagtc ctgggcaaaa gaaaagcaaa ataaccaact atagattagc caaaaccttt 60 ttgtttaaac agttagtaat ttataagttt taatttataa gtttgaattt ataagtttta 120 attcataact tatgatttaa aatttataat ttataacata ctaattaatc ttaagtatat 180 tgtttttgat ttagtagagt gtagcaaata tgtctatttc aataccagca agtgaatatc 240 aaagtagcaa gacttatagt caactactca tgacttttag agacatggtc tctgaagagc 300 aatataaggt aatcaaagaa agaatggttg aaaacaataa gcattactat gctctagata 360 aattctcgca gggtgtttat gatataaaag acatgcagat attagttgca gacttgtcat 420 ggctttgtgc ttttgataaa tcttcagatc aaagaactag agaaacattg gtaatgatta 480 gcaagtgtgt tttagatatt atgctgagcc tgaaacctga agtcagtcag acaaaatgct 540 ttgtttgtga caagaaatca acatatgaga ctgataattt atcagttgct aggcttgatg 600 atgttagcaa taggttctct ggtggatctg tgcactacat ggtgaagctc aaagaacatg 660 ataaggttgg actcatatca tatatacatg aactgaagaa gattggaggg taccgtggtt 720 ggtacagaga tggtggcaaa ctaagacatg aatatattgt ctatactgat gcaaaaccca 780 taatgagaga gaagtttgca ccagtctgct gagatgcaaa agagggtgaa ggaatactag 840 taattgatag aaaaacctaa aaaacataaa agaagacaaa aaacaaaaac aaaaacacac 900 aggaaaacaa aaaaacaaaa aaagaaaaaa gaaaaaaaga gaagaagaaa aacaacacaa 960 aagccataag tgggaccaat gtgaaaatga tggagaaata tgagatgaat aaagggaaga 1020 aaggtaggta aagataaaaa gagtgaaaat atgccattta aagaagtagt aatatgagga 1080 aaaaacacat tgataataaa aaatgtttaa agtgaaatag caaaatgtcc ttcgggacat 1140 atccgagata ttgtacaccg gattcacacc gaagtgtgac tttcttttat ctttagtgtc 1200 taagtttgat tctttcctta gttctttgta tatctcaaca tgctgtgact cccacatttt 1260 ttatgatatt tccctcttcc tgatatttat tttcttcacg tcacatagtt tctcatgatt 1320 tcaatctctc cctcctgatc actgagttac aatttatgat aactgctggc atcttgtgga 1380 tagatttatt tatttattta ttatttactt tctcaatgag aattctagag acatacatta 1440 ttacaacact tgcagagact atgctggtct ttgggttgtc ttccacaaac tcaattaaga 1500 atttgacaag tggttgatct gatctaaact gcaccattcc attctctata ttgttcttat 1560 cggaggaaac ttcaattgtg tgttccctaa ggcttgtttc acaaaccact cttctcactc 1620 ctcttcctgt tgtcatgttg caattgactt taacatcact acttgtgtgg gtgtagactg 1680 atatatgttt tgagaacttc tgaaacccta agccttcaac attaaacctg aatgatgata 1740 gatcctcaca agtgagtaat ccccaaccaa ttctctcact ctcaatataa agattgatta 1800 tggctcctcc aatcaacctg gaaacaccct taatactaca cttcgatatt gaaccaacaa 1860 aatcactttc atgctcttgg accaattcct ttagtgtttt gatctgtatg gtgattggcc 1920 acatttgatc agttgagatt tgataaccac caaacaaagg ttctagatgt tccagatcat 1980 tgttagttgt attagttcct gtaagtttgc tatctccact atctaccata atattagaag 2040 tgtgttcata aatatgttgg tacttgattt cacacttctt agataattca taggctgaat 2100 cgtggtcagg acactgaagt gaaccgtaat gatcatcact caagtcaccc aagtcgttaa 2160 aattgacttt aaacaattca ccaccacacc ttacaaattt tgtaggtaat aaaactggag 2220 ttgttgagtc taaagtcatt gtgtatccat tgcctttgta aactgaggaa ctaatctctg 2280 ctatggtttg atttgtaccc atagtgatta ccaagacaat gtatggttgg aattcttgac 2340 attcttctgc tgaacatatt aacttatctc cactctcaac tttcattctc tgccaatggc 2400 tagatcttat gaaaggaact ccacaggaaa agacccccac attctcatac ttgcaataat 2460 catgatgtag atattgttcc tcatcatccc agatgctctt tggaggattt aagctacaat 2520 ctggaccagt gaagcattta taatcatctc ttgtaatgac atacttatac tttctggtgt 2580 agtaaatcac tcttgagtta catctcatgc taatccctag aacacgtatt ttgagattag 2640 catctttaaa agataaacaa gtctcatcac ccattgatct aaacttcaaa tttatagttg 2700 tgactgatct gcatgcatag gaattgcaag tactaagaga ggttatgcta tcaactccat 2760 ctctgcaaga acctagaacg aggggaagaa ataccaaaat aattccgact gttaaatatg 2820 taccatctct catacgatac ctagttggta aagttttacc cttatcagaa tctacatcct 2880 tgacgttctc atctgctaga ttgcttaatt catcctgttt cacccttact aactcatgag 2940 cattgtagtc agatctcctc cttttcatta atttgaaggg gtttggtatc agtttcttca 3000 taatcctaaa gacaaaattt gttggcacta ttatcaagta atacttaata agccctatta 3060 tggtgaaaat tactgtgatt atgattagtg caattcctga gtaaagaaac cagacaaatc 3120 ctttattaca atcccaatgt tttagtctca gccaaaaatc catcctatca tgcattgaac 3180 aaatgtttgt cgcttcacac ttcacactac gataaacatc attgaaagct acattcacaa 3240 catctgtgta tagtggcagc tgtcttgaag tacaatcagt aaattcaaat tcagtgtggt 3300 ctatccatag tttgcagttt ttctcagaac ttgttagtat accatcaatg cacttcacta 3360 ttatcttaga atcatattct ccatttttgt gaacacacac ttctaaggat tcagcagaaa 3420 gtataaactg atcataagtc ccttttctca aagatcttga gtccatatcc ttcgtatcaa 3480 ttggtgttgt cttaatcgtc attttcacat gccttctcag tatccacctg ttacactcat 3540 taatgaagat atcatcaacc ctgcgtatag atgttgatct cagtattaca ttgtcgctaa 3600 acttatccat cttaccacag cactttgtag tatctgttct acacaaacca gctgtgttta 3660 gtcctgtttt ctccaaatag tatccagaag tatacctggc tctggagcaa atagaaattc 3720 cttcattaca gtcataataa ttgcagctaa atgatgaagt gatcctatca ccttcatcat 3780 ggtagataac ttgtgtgtac agagacttgg tttcggatag ctctagcaaa gctagagcaa 3840 atgtgatcac aagcaacccc attcctatac aggaacaaat ggtctattat aaccaattaa 3900 tgggtggtga atgtcactaa tagaccactg gttgttagtt gtgaaaacga ttctgattga 3960 agttgaataa aaaatcctca taaatgaaac aaataagcaa gtataaaaca aaggtcttcc 4020 ttgactttaa gaaatgtgtt tgttttacaa atatgcccag actttgtgt 4069 //