ID AB023585; SV 1; linear; genomic RNA; STD; VRL; 3817 BP. XX AC AB023585; XX DT 05-DEC-2000 (Rel. 66, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Barley yellow mosaic virus RNA-1 for 270K polyprotein, partial cds. XX KW 270K polyprotein. XX OS Barley yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-3817 RA Lee K., Kashiwazaki S.; RT ; RL Submitted (11-FEB-1999) to the INSDC. RL Satoshi Kashiwazaki, National Agriculture Research Center, Department of RL Plant Protection; 3-1-1 Kannondai, Tsukuba, Ibaraki 305-8666, Japan RL (E-mail:skashiwa@narc.affrc.go.jp, Tel:81-298-38-8932, Fax:81-298-38-8929) XX RN [2] RA Lee K., Kashiwazaki S.; RT "Sequence analysis of the 3'-terminal regions of RNA-1 of Korean isolates RT of barley yellow mosaic virus"; RL Unpublished. XX DR MD5; 4923f5e0974f1e6369fbcb8e22292b38. XX FH Key Location/Qualifiers FH FT source 1..3817 FT /organism="Barley yellow mosaic virus" FT /segment="1" FT /isolate="Haenam" FT /mol_type="genomic RNA" FT /db_xref="taxon:12465" FT CDS <1..3585 FT /codon_start=1 FT /transl_table=1 FT /gene="NIa-Pro, NIb, CP" FT /product="270K polyprotein" FT /db_xref="GOA:Q9DUM1" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="UniProtKB/TrEMBL:Q9DUM1" FT /protein_id="BAB18744.1" FT /translation="PELRRAYEKRPYFNFYDLQTDSNILEAIFYTTEGDEFFRTADPNK FT DMNLVADKLRSFLDTKLVVGHHQRQMLEETAKVVIKDTKGTAHHMDISQHDPDHLKQNG FT SGKIGYPEHRGQFRQEGPAKTADYDLGVEFGTDTDDITLEASTGILLSQVGVDVATRVG FT RICIGTFNMNCYFYSDWILVPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLD FT VIAIRRPAILRPRTKLVKAFAIEEPVIAQMVFVDAQGVRKCTQSDWARKEENSGRWSHK FT ISTVLGMCGCPVLDVGKNRLIGIHVATNYTKKRNEFQPFTQEVVDFINGPGTKIPYCPW FT VFDRPACGYASHTALFEKPTTLTDIIHMQASDGLHNINNAIEGFGSSLRGQLVSPPTES FT TRQRFDKLFGSGSFELIGQMNKGLIDKHVIVGENDDVHDFMREHPTFTWLKDFMNEYAP FT SVLSYSAYYKDLCKYNRAKHVLTYNSEELHYATKGLIKMLEDAGLTQGSVRTPQQVISD FT IQWNTSAGPSYQGKKRDLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIE FT KVEAEKTRVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHDKL FT NRPGWLHGSGDGSRFDSSIDPFFFDVVKTIRKHFLPSEHHKAIDLIYDEILNTTICLAN FT GMIIKKNVGNNSGQPSTVVDNTLVLMTAFLYAYIHKTGDRELALLNERFIFVCNGDDNK FT FAISPQFDEEFGHDFSPELVELGLTYEFDDITSDICENPYMSLTMVKTPFGVGFSLPVE FT RIIAIMQWSKKGGVLHSYLAGISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQ FT SSTALPIPSMLDVYRLHYGDDEIWLQAADPLTDAQKEDARIAAADGARFELADADRRRK FT VEADRVEAARVKKAADAALKPVNLTATRTPTEDDGKLKTPSGARIPSSAADGNWSVPAT FT KQVNAGLTLKIPLNKLKSVPKSVMEHNNSVALESELKAWTDAVRTSLGITTDEAWIDAL FT IPFIGWCCNNGTSDKHAENQVMQIDSGKGAVTEMSLSPFIVHARMNGGLRRIMRNYSDE FT TVLLITNNKLVAHWSMKHGASANAKYAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYN FT TMLTSDTTNLRKTTNHRVLDSDGHPELT" XX SQ Sequence 3817 BP; 1096 A; 899 C; 861 G; 961 T; 0 other; ccagagcttc ggagagccta tgaaaagaga ccatacttca atttctacga ccttcaaaca 60 gatagcaaca ttctggaagc tattttctac accactgaag gcgatgagtt tttccgaaca 120 gcagatccca acaaggacat gaacttggtt gctgacaaac tacgctcttt tctcgacaca 180 aagcttgttg ttggacacca ccagcggcag atgctagaag aaacagccaa ggttgtcatc 240 aaagatacga agggaactgc gcaccacatg gacatttcac agcatgatcc agaccatcta 300 aagcagaatg ggtccggcaa aattggatat ccagaacacc gggggcagtt tcgacaggaa 360 ggacctgcca aaacagcgga ttacgatctt ggagttgagt ttggcaccga caccgatgac 420 atcacgctcg aagcctctac tgggatatta ttgtcacaag ttggggtcga cgtcgcaacc 480 cgagttggaa gaatttgcat tggtactttc aacatgaact gttacttcta cagcgactgg 540 attctggttc caggacacct gcaagacaga tccggtaacg tgacaattca atttcctgac 600 caaacagtgc aaaccacaac tgatgcactc aacgcaaatg gtgtgaaacg attctatgga 660 ttagatgtga tagcaattcg gcgccctgct attttgagac ctcgcaccaa gttggtcaaa 720 gcttttgcta ttgaggaacc agttatcgca caaatggtct ttgttgacgc acaaggagtt 780 cgtaagtgta ctcaatctga ttgggccaga aaggaggaga attccggacg ttggtcacat 840 aagatttcca ctgttcttgg tatgtgtgga tgcccagttc tggacgttgg aaagaacaga 900 ttgataggaa tccatgttgc cacaaactac acaaagaagc gcaacgagtt ccaacccttc 960 actcaggagg tcgttgattt cataaatgga cctggaacaa aaatccccta ctgcccatgg 1020 gtattcgata gaccggcttg tgggtatgca tcccacacag ctttgttcga gaaaccaacc 1080 acactaactg acatcattca catgcaagct tctgatggtt tgcacaacat caacaatgcc 1140 attgagggtt tcgggagttc actgaggggt cagctcgtgt caccacctac tgaatccacc 1200 aggcaacgtt tcgataagct gtttggcagt ggcagctttg aactcattgg gcaaatgaac 1260 aaaggcttaa tcgacaaaca cgtaattgtt ggggaaaatg atgatgttca tgacttcatg 1320 cgcgagcacc caacatttac ttggttgaaa gatttcatga atgagtatgc gcctagtgtt 1380 ttgtcttact ctgcttacta caaagacctt tgcaagtata atcgtgcaaa acatgtgcta 1440 acttacaact cggaagagct ccattatgca acgaaaggac tgatcaagat gttggaagac 1500 gctggcttga cacaaggcag tgtgaggaca ccccaacaag tcatttcaga cattcaatgg 1560 aacacttccg ctggacctag ctatcaaggg aagaaacgcg acctctgtgc ccatttgagt 1620 gatgatgagg tgctgcatct tgctgaggtg tgtcgccaac aatttctcga aggcaagtca 1680 actggagtgt ggaatggttc tttgaaagct gagttgagaa ccattgagaa agttgaggcg 1740 gagaaaacgc gtgttttcac agcctctccc ataacaagct tgtttgccat gaaattctac 1800 gttgacgatt ttaacaagaa gttctacgcc accaatctga aagcccccca tactgttggc 1860 atcaataagt tcggtagggg atgggaaaaa ttgcatgata agcttaatcg ccctggatgg 1920 ttgcatggta gtggagatgg ttctaggttc gatagctcca tcgatccttt cttcttcgac 1980 gttgtgaaaa ctattcgcaa gcactttctc ccttctgagc atcataaggc cattgatctc 2040 atatacgatg agattctcaa cacaaccatc tgcctggcta atgggatgat catcaagaag 2100 aatgttggga acaacagcgg gcagcctagc actgttgtcg ataacacact tgtgctcatg 2160 actgcatttc tctacgcata catccacaaa acaggagacc gtgaattggc cttgctaaac 2220 gagcgtttca tctttgtttg caatggcgat gacaacaagt ttgccatatc tccgcagttt 2280 gacgaagagt ttgggcatga tttctcccca gaacttgttg aacttgggct cacgtacgaa 2340 tttgatgaca tcactagcga catttgcgag aatccttata tgtccctcac catggtgaaa 2400 accccttttg gcgttggttt ttctcttccc gtggaaagaa tcatagctat catgcaatgg 2460 tccaagaaag ggggagttct gcactcatat ttggctggca tttccgcaat ttacgaatcc 2520 ttcaacacac caaaactttt caaatcaatc tatgcgtatc ttctttggct cactgaggag 2580 cacgaggcag aaattctcgc agccatgact caatcctcaa ctgctcttcc cataccatca 2640 atgctcgatg tttatcggtt gcattatggc gatgatgaaa tttggctgca agctgctgat 2700 cctctcactg atgcacaaaa agaagatgca cgcattgctg cagctgatgg agcacgcttc 2760 gaactagccg atgctgatcg tagacgtaaa gttgaggctg accgtgtgga agcggcaaga 2820 gtcaaaaagg cagctgatgc tgcactaaaa ccagttaacc tcacagcaac acgcacgccc 2880 acagaagatg atggcaaact taaaacacca tctggcgcta gaataccatc atcagctgca 2940 gatggtaact ggagcgtgcc agcaacgaag caagttaacg ctggtttgac actcaaaatt 3000 cccctgaata aactcaaaag tgtacctaag tctgttatgg agcataacaa ctcagtcgca 3060 ctcgaatctg agctaaaagc ctggactgat gctgtgcgca caagtttggg tatcacaact 3120 gatgaggcat ggatcgatgc cctcattccc ttcatcggat ggtgctgcaa caatggcacc 3180 tcagacaagc atgctgagaa tcaagtaatg caaattgaca gcggaaaggg agctgttaca 3240 gagatgagtc tgtccccatt tattgttcat gctcgaatga atggtggact ccgaaggatc 3300 atgcgcaact acagtgatga aaccgtctta ctcatcacaa acaacaaact agttgcacat 3360 tggtcaatga agcatggcgc ttctgcaaac gcaaaatacg ctttcgattt cttcgtccca 3420 cgatcatgga tgaacccaca ggatatcgaa gtgtcaaagc aagcgcgctt agcagcactt 3480 ggaactggaa cgtataacac catgttaact tccgacacta ccaatctgcg taagacaacc 3540 aaccacaggg ttctggactc agatggacac ccagaactaa cctaaaccat caccccgtgc 3600 cttatacatc acccaccccc actcataatt cagtctttaa attatgttcg tgacgtcttt 3660 gtatcaggct cggaacggtt ctatgatcca tatgcctttg gcagttacaa tgtcagcatt 3720 ctcattgagg agtatgacag cgtttgatca gccgttttca atcatccgtc gttggatggt 3780 ggtgcactta gtgcacttac gagtaccaga aggtaat 3817 //