ID AB022887; SV 1; linear; genomic RNA; STD; VRL; 2839 BP. XX AC AB022887; XX DT 03-FEB-1999 (Rel. 58, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 3) XX DE Navel orange infectious mottling virus gene for polyprotein (RNA dependent DE RNA polymerase region), partial cds. XX KW polyprotein. XX OS Navel orange infectious mottling virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-2839 RA Iwanami T.; RT ; RL Submitted (27-JAN-1999) to the INSDC. RL Toru Iwanami, National Institute of Fruit Tree Science, Department of RL Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka 424-0292, Japan RL (E-mail:tiwsw37@okt.affrc.go.jp, Tel:81-543-69-7110, Fax:81-543-69-2115) XX RN [2] RA Karasev A.V., Iwanami T.; RT "Phylogeny and Evolution of Plant Picorna-like Viruses"; RL Unpublished. XX DR MD5; 2bd77064fed23eea11358c4d7fa44fd2. XX FH Key Location/Qualifiers FH FT source 1..2839 FT /organism="Navel orange infectious mottling virus" FT /isolate="NI-1" FT /mol_type="genomic RNA" FT /db_xref="taxon:85516" FT CDS <1..2619 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /note="RNA dependent RNA polymerase region" FT /db_xref="GOA:Q9YZ97" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9YZ97" FT /protein_id="BAA74537.1" FT /translation="ENFDLDQNMSIIVHNSVYSFVLRPGAITYKRYNAPNLVDKVHELV FT RVNLPKNRGFSLDVRAQFSEDFYDNGTAMKCWVVPNKNPAVADVMHRVDCEKSTQIIDI FT FASELSRSGGCEPVRQTQRFIYADGPARNGHCGRLLCANLSGHWRVIGMCAGEGKNKGG FT ITKALYADIPHEFLKEENVAAVLRGAEIEDIRILDRFAVTIQENVRELTPMTKCLGRVA FT GQSYPRALRKTSIVPSLIHEHLWRKPETEPTVLGKSDKRTPYPYDPYTTISDKFVEEVG FT PIDISEGSDASLVLANIGSSWKAAGEIQCSTVLSWEVAINGNPAIPYCERLPMSTSEGY FT PDSVAGTSERKGTRRFFELEGGDARVPTPALMTELEVLERELQKEEVCLTCINTACAKD FT EKTTSHKVRVEPKTRIFEILPFQINIIIRRYFMFWMQLLMAAHDQLPSKVGLNVYSESW FT DILLGRHTRLANHFTGDYSGFDTSTPRILVYAIVDKINELAGDSEMNQRTRRNIIRFVL FT NRYLISDGYVYEIHGGTPSGFAPTVMINSIVNEFYLKWSWMGLMKEAGYAKEASLYAFH FT EATEISLYGDDNFVSVATPVASLYNLKTISEFLRRIGVKLGDGAKTGITKPFIPLEEVD FT FLKRQFVADAGSTAILCPLKKISIEERLFYVKGGQDELAALELNMATALCEAFFHGKEY FT FRFLEAEILKAVRKSRISLTKPLPTMESIRVWYLSQRTNTKVRSPSYEGLGTMSGILAV FT GVSEARIVGKITFYSGPEFQGRVESHLKVIPTYIPGGWKVGKDKQIYISFVRDATKMAK FT IIESVDLFECVVATDKAMAYLVAICMAYKHKQISRMEVRCHVQNLKTADALLCNEICNN FT L" XX SQ Sequence 2839 BP; 781 A; 568 C; 692 G; 798 T; 0 other; gagaactttg acctggatca aaacatgagc attatcgttc acaatagtgt ctatagtttt 60 gttttgagac cgggtgccat cacgtataag cgatacaatg cacctaattt agtcgataag 120 gtgcatgaat tggtgcgcgt caacctgccc aaaaatagag gtttctcctt agatgtgcgc 180 gcccaattca gcgaagattt ctacgataat ggtactgcca tgaaatgttg ggtagtacct 240 aacaaaaatc ccgccgtcgc tgatgtgatg catagagttg actgtgagaa gagcacgcaa 300 attattgata tttttgcttc tgaattatca cggtcaggtg gatgcgagcc ggtcaggcaa 360 actcaaagat tcatctatgc tgatggacca gctcgcaatg gtcattgtgg tcgcctcctg 420 tgcgccaatc tgtccggaca ctggcgtgtt attggcatgt gcgccggtga agggaaaaat 480 aaaggaggca tcaccaaagc cctctatgct gatataccgc acgaattctt gaaagaagag 540 aacgtagcag cggttttgag gggggctgaa attgaggata tccgcatttt ggatcgtttt 600 gctgtgacga ttcaagagaa cgtccgcgaa ctcaccccga tgaccaaatg tttgggtaga 660 gttgctggac aaagttatcc tagggctctg aggaaaacgt caatagttcc ttcacttata 720 catgaacatc tttggaggaa accagagact gagcccactg ttcttgggaa atcggataag 780 cggactccgt atccctacga tccatatacc acgataagcg ataaattcgt ggaagaagtt 840 ggcccaattg atatttcgga gggttccgat gcctccctgg ttttggctaa cataggatcg 900 tcttggaaag ctgctggtga aattcaatgt agtaccgtcc tctcttggga ggtagcaatc 960 aatggaaacc cagcaattcc gtattgtgaa cgcttgccca tgtccacctc tgaaggatat 1020 cctgactctg tagcaggcac ttcggagaga aagggaacga ggagattctt cgaattggaa 1080 ggaggcgatg cgagagttcc cactccagca ttaatgactg agctggaggt tctggaaagg 1140 gaactgcaaa aagaagaagt ttgtcttaca tgtatcaaca cagcatgtgc taaagatgaa 1200 aagacaactt cccataaggt tagggttgaa ccgaaaaccc gcatttttga aatcctcccg 1260 tttcaaatta atattattat ccggaggtat ttcatgttct ggatgcagct actgatggct 1320 gcacacgatc agctgccgag caaagtgggt ctgaatgtct actctgaaag ctgggacatt 1380 ctgctcggga ggcacacccg attagcgaat cacttcacag gtgattactc gggatttgac 1440 acctcgaccc ctcggatcct agtctatgca atagttgata aaatcaatga attggctgga 1500 gattccgaga tgaatcagcg cactcgtcgt aacataatca gatttgtatt aaatagatat 1560 cttatatctg atggttatgt ttacgaaatt catggtggaa ccccatccgg ttttgcgccc 1620 actgtaatga taaattctat tgtgaatgaa ttttatctta aatggagctg gatgggattg 1680 atgaaagagg cgggatatgc aaaagaagct tcactttatg ccttccatga agccactgaa 1740 atttctctat atggggatga caatttcgtt tcagtggcta ctccggtagc ttctttgtat 1800 aatcttaaga cgatctctga attcctgaga agaatagggg ttaagctcgg tgacggagca 1860 aagactggta ttacaaaacc ctttattcct cttgaagagg ttgattttct gaagaggcag 1920 tttgttgctg atgccgggtc aacggcaata ctgtgccctc ttaagaagat ctctattgaa 1980 gagagattgt tttacgttaa aggaggacag gacgaattgg ccgctttaga gttgaatatg 2040 gccacagccc tgtgtgaggc tttcttccac ggaaaagagt atttccgctt tctagaagcg 2100 gaaattctta aggcggtaag aaaaagcagg attagcctca ctaagcctct acccaccatg 2160 gaatctataa gggtgtggta cctgtcacag agaacaaata caaaggtacg ctcgccctcc 2220 tacgaaggac ttggcacgat gtctggtatt cttgctgttg gagtatcaga agctagaatc 2280 gtagggaaaa tcactttcta ttctggccct gaattccaag gaagggtgga atctcaccta 2340 aaggtgattc ctacttatat cccaggggga tggaaagttg gtaaagacaa gcagatctac 2400 atctcttttg tgcgagatgc tactaagatg gctaaaatca tcgagagtgt ggatttgttc 2460 gagtgcgttg ttgctactga caaggcaatg gcatatcttg ttgcgatctg catggcatac 2520 aaacataagc aaatttccag aatggaagtt agatgccatg ttcagaatct taaaactgcg 2580 gacgcgctgt tgtgcaacga gatctgcaac aatctgtaga aatacagaat tgggtgttgc 2640 ccaccggacc ttaacgtggg tttttctgta caaagttttc cgttgtgtgc ttactttgtt 2700 ttcttttgtt tgttttaatt taaaataaac tggatttcaa tagagggttt cttgaactct 2760 tccttcttcc gatcccagga gtttggtgtg tttttcttga tttctgcacc ggtttcgatc 2820 agtgaaaatc tgatggccc 2839 //