ID AB020781; SV 1; linear; genomic DNA; STD; VRL; 2757 BP. XX AC AB020781; XX DT 01-AUG-2000 (Rel. 64, Created) DT 18-NOV-2009 (Rel. 102, Last updated, Version 3) XX DE Honeysuckle yellow vein mosaic virus genes for V2 protein, coat protein, C3 DE protein, C2 protein, replication-associated protein, C4 protein, complete DE cds. XX KW . XX OS Honeysuckle yellow vein mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2757 RA Onuki M., Hanada K.; RT ; RL Submitted (04-DEC-1998) to the INSDC. RL Contact:Masatoshi Onuki Kyushu National Agricultural Experiment Station, RL Laboratory of Molecular Plant Pathology; Suya 2421, Nishigoshi, Kumamoto RL 861-1192, Japan XX RN [2] RA Onuki M., Hanada K.; RT "Comparison of the nucleotide and amino acid sequences of PCR products RT derived from Honeysuckle-infecting geminivirus(HsGV)"; RL Unpublished. XX DR MD5; ad5984488cd1c8a70a85f74bc98a82be. XX FH Key Location/Qualifiers FH FT source 1..2757 FT /organism="Honeysuckle yellow vein mosaic virus" FT /mol_type="genomic DNA" FT /clone="pHSK3" FT /note="synonym: Honeysuckle-infecting geminivirus" FT /db_xref="taxon:180587" FT CDS 284..634 FT /codon_start=1 FT /transl_table=1 FT /gene="V2" FT /product="V2 protein" FT /db_xref="GOA:Q9IR65" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9IR65" FT /protein_id="BAB03588.1" FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLLLVEATYSPDTVGYDLIRDL FT IGVVRAKNYVEATSRYRDFHSRIQGTSPSELRRPVCQPCECPHCPRHKQREIMGSKAHV FT SEAQDIQDVQKP" FT CDS 444..1217 FT /codon_start=1 FT /transl_table=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q9IR64" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9IR64" FT /protein_id="BAB03589.1" FT /translation="MSKRPADIGIFTPAFRARRRLNFDGPYVSRVNVPIAQGTSKERSW FT AQRPMYRKPRIYRMYRSPDVPKGCEGPCKVQSFEKKDDVGHSGKMLCISDITRGNGLTH FT RVGKRFCIKSVYIIGKIWMDENIKLKNHTNNVIFWLVRDRRPVSVPYGFQEAFNMYENE FT PSTATIKQDLRDRLQVLHKFTGTVTGGQYASKEQAMIKRFWRLNHHVTYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRVYFYDSVQN" FT CDS complement(1214..1618) FT /codon_start=1 FT /transl_table=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q9IR63" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9IR63" FT /protein_id="BAB03590.1" FT /translation="MDSRTGVTITAAQARSGAYIWTVPNPLYFKITSHAQRPFNMDQDI FT ITAQIQFNHNLRSQLGLHKCFLTFKIWTLSHHQTSHFLILFRTQVLKYLDDLSVISINN FT VIRAVDHVLYDVLDGTEYVQQFTDIKFKLY" FT CDS complement(1359..1766) FT /codon_start=1 FT /transl_table=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q9IR62" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9IR62" FT /protein_id="BAB03591.1" FT /translation="MQPSSPSTAHSTPVPIKVRHRSEKKRAPRRRRIDLNCGCSIYVSL FT GCANHGFTHRGHHHCSSGKEWRVYLDSAKSPLFQNHEPRTTTVQHGSGHNNSTDPIQPQ FT SQISTGSTQVLPDFQDLDSLTSSDLAFLNFI" FT CDS complement(1666..2757) FT /codon_start=1 FT /transl_table=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q9IR61" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9IR61" FT /protein_id="BAB03592.1" FT /translation="MAPPKRFQINSKNYFLTYPHCSLTKEEALSQLKALDTPTNKLFIR FT ICRELHEDGSPHLHVLLQFEGKYRCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKAYM FT EKDGDVVDFGIFQVDGRSARGGCQSANDAYAEAINSGSKSSALSILREKAPKDFVLQFH FT NLNSNLDRIFAPPLEEFVSPFLSSSFDQVPEQLEEWAAENVRDSAARPWRPMSIVIEGD FT SRTGKTMWARSLHPRHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRD FT WQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYTEYLDEEKNAALKAWAIRNATFITLYSP FT LYSSTHQGATQIREEESTSQAED" FT CDS complement(2307..2600) FT /codon_start=1 FT /transl_table=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q9IR60" FT /protein_id="BAB03593.1" FT /translation="MGALISTSSCNSKENTDAQINDSSISYPQLGQHISIRTFRELRAR FT RTSRPTWKKTGTSLILEFSRSMEDQLEEVASLPTTHMPRQSTQGPSHRPCLY" XX SQ Sequence 2757 BP; 725 A; 559 C; 648 G; 825 T; 0 other; tgacttggtc aattggtacc aattgatctc tctcctggta tcggtacatt ggtaccaata 60 tatatggtgg tacctaatgg cattattgta attactttaa tgttgaattt aaaattcaaa 120 ttggtaaagc ggccatccgt ctaatattac cggatggccg cgcgaaattt cgtggtgggc 180 cccccttgtc ggccaataga gttcgtgcct tgaaagttag ataagtggat gttgacgtca 240 cttttgtctt tatatacgtc agccctaatt ttaaaggtta aacatgtggg atcctttact 300 taacgatttc cctgaaaccg tacacggttt tcggtgtatg ctagcggtta aataccttct 360 tctggttgag gctacatact ctccggatac ggtgggttac gatctaatac gcgatcttat 420 aggtgttgtt cgtgcgaaga attatgtcga agcgaccagc agatataggg attttcactc 480 ccgcattcag ggcacgtcgc cgtctgaact tcgacggccc gtatgtcagc cgtgtgaatg 540 tccccattgc ccaaggcaca agcaaagaga gatcatgggc tcaaaggccc atgtatcgga 600 agcccaggat atacaggatg tacagaagcc ctgatgtacc taaggggtgt gaaggcccgt 660 gtaaggtcca gtctttcgag aagaaagatg atgttggtca ctctggtaaa atgttatgta 720 tctcagatat tactcgtggt aatggactta cacatcgtgt tgggaagagg ttttgtatta 780 aatcagtcta tatcattgga aagatatgga tggatgagaa cattaagctc aagaatcaca 840 ctaataacgt gatcttctgg cttgttagag ataggcgccc tgtgtccgtt ccttatggtt 900 tccaagaggc gtttaatatg tatgaaaatg aacctagtac ggctactatc aaacaggatt 960 tgagagatcg cttgcaggtt ttacacaagt tcactggtac ggttacaggt gggcaatatg 1020 cgtctaagga acaagctatg atcaagcgtt tctggaggtt gaatcatcat gtcacataca 1080 atcaccaaga ggctgctaaa tatgagaacc atactgaaaa tgctttgtta ttgtatatgg 1140 cctgtactca tgccagtaat ccagtgtatg ctacattgaa aatcagagtg tatttctatg 1200 attcagtaca gaattaataa agcttgaatt ttatatcagt aaattgttgt acatactctg 1260 ttccatctaa tacatcgtac aatacgtgat caactgccct aattacattg ttaattgaaa 1320 ttacactcaa atcatctaaa tacttcaaca cttgtgtcct aaataaaatt aagaaatgcg 1380 aggtctgatg atgtgagaga gtccaaatct tgaaagtcag gaagcacttg tgtagaccca 1440 gttgagatct gagattgtgg ttgaattgga tctgtgctgt tattatgtcc tgatccatgt 1500 tgaacggtcg ttgtgcgtgg ctcgtgattt tgaaataaag gggatttggc actgtccaga 1560 tatacgcgcc actccttgcc tgagctgcag tgatggtgac ccctgtgcgt gaatccatga 1620 tttgcacacc ctaaactgac gtatatagaa cacccacagt tcagatcaat cctccgcctg 1680 cgaggtgctc tcttcttctc tgatctgtgt cgcaccttga tgggtactgg agtagagtgg 1740 gctgtagagg gtgatgaagg ttgcatttct aattgcccag gcctttaggg cagcattctt 1800 ctcctcgtct aaatattctg tgtatgatga cgttgggcct ggattgcaga ggaagattgt 1860 tgggatacca cctttaattt gaattggttt cccgtacttg gtgttgcttt gccagtccct 1920 ttgggccccc atgaactctt taaagtgctt tagatagtgg ggatccacgt catcaatgac 1980 gttgtaccat gcctcgttgc tgtaaacctt ggggcttaag tcaaggtggc cgcaaaggta 2040 attatgacgt ggatgtagag acctggccca catggtcttc cctgtcctgc tatccccctc 2100 tatcacaata ctcatgggcc tccacggccg cgcagcggaa tccctgacgt tctcggcagc 2160 ccattcctca agttgctctg gaacttgatc aaaggaagaa gataaaaaag gagaaacaaa 2220 ttcctccaac ggaggagcaa aaatcctatc taaattacta tttaaattat gaaattgtaa 2280 aacaaaatct ttgggagctt tctcccttaa tatagacaag gccgatgact tggaccctga 2340 gttgattgcc tcggcatatg cgtcgttggc agactggcaa cctcctctag ctgatcttcc 2400 atcgacctgg aaaattccaa aatcaacgac gtccccgtct ttttccatgt aggccttgac 2460 gtccgacgag ctcttagctc cctgaatgtt cggatggaaa tgtgctgacc tagttgggga 2520 tacgagatcg aagaatcgtt gatttgtgca tctgtatttt ccttcgaatt gcaggaggac 2580 gtggagatga gggctcccat cttcgtgtaa ttctctgcaa attctgatga ataatttatt 2640 ggttggtgta tctagggctt ttaattggga aagtgcctct tctttggtaa gagagcagtg 2700 tgggtaagtg aggaagtaat ttttagaatt tatttgaaaa cgcttcggag gagccat 2757 //