ID AB018086; SV 1; linear; genomic RNA; STD; VRL; 3930 BP. XX AC AB018086; XX DT 06-APR-1999 (Rel. 59, Created) DT 07-JUL-2003 (Rel. 76, Last updated, Version 5) XX DE Chuzan virus genomic RNA for RNA-dependent RNA polymerase VP1, complete DE cds. XX KW RNA polymerase; RNA-dependent RNA polymerase VP1; VP1. XX OS Chuzan virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-3930 RA Yamakawa M.; RT ; RL Submitted (29-SEP-1998) to the INSDC. RL Makoto Yamakawa, National Institute of Animal Health, Department of Exotic RL Diseases; Josuihoncho 6-20-1, Kodaira, Tokyo 187-0022, Japan RL (E-mail:yamato@ed.affrc.go.jp, Tel:+81-42-321-1441(ex.43), RL Fax:+81-42-325-5122) XX RN [2] RX PUBMED; 10211963. RA Yamakawa M., Kubo M., Furuucni S.; RT "Molecular analysis of the genome of Chuzan virus, a member of the Palyam RT serogroup viruses, and its phylogenetic relationships to other RT orbiviruses"; RL J. Gen. Virol. 80:937-941(1999). XX DR MD5; a496f646575e68f803fbc8b273ece246. XX FH Key Location/Qualifiers FH FT source 1..3930 FT /organism="Chuzan virus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:77204" FT CDS 23..3910 FT /codon_start=1 FT /gene="VP1" FT /product="RNA-dependent RNA polymerase VP1" FT /db_xref="GOA:Q9WAT3" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:Q9WAT3" FT /protein_id="BAA76549.1" FT /translation="MQDASLVRSSVQRFLKYTKIDGKEPKYIYYRFSKNMREIRRKRGV FT KYKTDDTYFERRRDQGILNLYGIQVAVESSWEDILDGEPQYDTLKIFERSVLNLRDLIP FT EEEFLRNYRVEKEHPFREFVEMRAKAEMQIYGDLPVKAWCSFIREYAEQIKHEPLGLST FT MREFVHKYGSPFNQNSRDLSQIEDFSMSYSTPLLFEMCCCESLIEFNMFERMNEEGIKE FT LEFGGLKINPFDLIREFFILCLPHPKKINNMLRAPYSWFVKMWGVCCSEVKVLRARGGD FT DRNSKDVVYDDFVRVKNIYGPILYKTQFYRQGREENISKVEETIKYSQELGNHACVLSY FT FLTMLRQVYKTEFDPTNIKHVMLASLLLSIQTITGYGRAWVKNVSSDIEKQMKPDKSNL FT ISRVNEYTRNNFIKAYDEALAAGEDIVKPEDMYTSMLRLARNTSSGFSTKFNVYKKYGP FT GIKNSIGKQIEITSRIKALVIFQEGHKIFVKEELEKKYNTVQNYQSKGSRDVPIKATRT FT IYAINLSILIPQLIVTLPLNEYFSKVGGSTRPQSGKLGGKIIVGDLEATRSRVMDAADT FT FRNSSDPEILTIAIDYSDYDTHLTPYNFRDGMISGIRTAMMKHSTLRYEGHTLDEIIEY FT GYGEGRVVNTLWNGKRAVYKADFAKYMELPPEDREKGEFRPPRGVKPIRTTKIIARIQS FT EDPDNQILVSPVDGSDLAFINTHLSGENSTLVANSMHNLAIGTIIQEEVKHRCAGLISF FT LSEQYVGDDTLFYTQPCISTEHDFDCIIRVIFDTIERCGHIASASKTIIAPFSVEKTQT FT HAKQGIYIPQDRMMLISSERRKDIEDVRGYLKSQVQTLTTKISRGFSHKLARMILMLKT FT SLVGFRKLKRTIFADGVYRDRRFDSDDEDGFTMYLIRDPLCAFLPVEWNGVGAYYESLN FT IVMTEDIFLDLLQTGNEFVRHLAGFINGTLPFWNETEADKRQIGTDAKMSFFTKMARPA FT VQSVLNSDELTDLVKQLPLGDYSPTNISKTMMHSALLKESSARSILTPTYESEYQRLLN FT VREEKSFKMFSHDLELSTNYIKMFDVQYSSGVQRHFYFPDQNLSPSFFLQKNLLGPRMS FT TRVRMSYVDRIDSILRGDVVMRGFITGNAIINILEKIGHTHNAADLSMLFQIMNIESRV FT ADRLAEYISAERLRFDAMKLLKRGICGDEFSMSLDVCTQEMSDNFIRYPKEFTKTEQDA FT AILYASQLLMIRAAHGHHPGILIINASAEERQKFKVRAARFKAHLPKLRLIRRLIQTER FT LSARMVQNQFV" XX SQ Sequence 3930 BP; 1302 A; 620 C; 878 G; 1130 T; 0 other; gttaaatttg ggatggtcaa tcatgcaaga cgcatcgttg gttcgaagca gcgtgcaacg 60 ttttctaaaa tatactaaaa tagatgggaa agagccgaaa tatatatact atagattttc 120 gaagaatatg agggaaatac ggcgtaaacg tggtgtcaaa tataaaactg atgatactta 180 tttcgagcgt aggcgtgatc aaggaattct gaatttatat ggcatacagg tagcggtaga 240 atctagctgg gaagatatat tagatggaga gccacagtat gatacattga aaatctttga 300 acgttcagta cttaacctga gagatttgat tcctgaggag gaattcttga ggaattatcg 360 cgtagaaaaa gagcatccgt ttcgtgaatt tgttgaaatg agagcgaaag cggagatgca 420 gatatatggg gacttgcccg ttaaagcctg gtgtagcttc ataagagagt acgcagagca 480 aataaaacat gaacctttag gattatcaac aatgagagag ttcgttcaca agtatggaag 540 tccgtttaat caaaattcac gagatttatc gcaaattgaa gacttttcta tgtcatattc 600 aacgccacta cttttcgaaa tgtgttgttg tgaaagcttg atcgaattta acatgtttga 660 acgaatgaac gaggaaggga ttaaagaatt ggagtttggc ggattgaaaa taaatccttt 720 tgatttaatt agggagtttt ttatattatg tttgcctcat ccaaaaaaga ttaataatat 780 gttacgagca ccttattctt ggtttgttaa gatgtggggt gtatgctgta gcgaggtcaa 840 agttctgcgt gcacgtggtg gtgatgatcg taattcaaaa gatgtagtct atgatgattt 900 tgtgagggtt aagaatatat atggtccaat actatataaa actcaatttt atcgtcaggg 960 gcgggaggaa aatatctcaa aagtggagga aactattaaa tactcacagg aattaggtaa 1020 tcacgcttgc gtgctaagtt attttttaac aatgctgaga caagtatata agacagaatt 1080 tgatccgacg aatattaaac atgttatgtt agcctcacta ttactatcaa tacaaacaat 1140 tactgggtac ggccgtgctt gggtaaaaaa tgtttcgagt gatattgaga agcagatgaa 1200 accggacaag agcaatctaa tatcaagagt aaacgaatat acacgtaaca actttatcaa 1260 agcgtatgac gaggcgctag ccgcaggcga agatattgtt aagcccgaag acatgtatac 1320 ctcgatgtta agattagctc ggaacaccag ttcgggattc tctacgaaat ttaatgtgta 1380 taagaaatac gggccaggta ttaagaatag cattggaaaa cagattgaga taacttcgag 1440 aattaaagca cttgttatat ttcaagaagg ccataagata ttcgtcaaag aagagttgga 1500 gaaaaaatat aatacagttc aaaattatca gagcaaagga tcaagagatg tgccgattaa 1560 agccacaaga acgatatacg ccataaattt atcaattttg atcccgcaat tgatagtaac 1620 attgccattg aatgaatatt tctcaaaggt aggtggcagc acaaggccgc aaagcggcaa 1680 gctaggaggg aagattattg taggggacct tgaagccaca cgttcacggg ttatggatgc 1740 agcagacacc ttccgtaatt catcagatcc agaaatactg actattgcta tcgattatag 1800 tgattatgac acacacttaa cgccatataa ttttagagat ggcatgataa gtggaattag 1860 gactgctatg atgaaacaca gtacgctaag atatgaaggg catacgctag atgaaatcat 1920 tgaatatgga tatggagagg gccgtgtcgt gaatacatta tggaatggaa aacgtgcagt 1980 ttataaggca gattttgcaa aatacatgga gttacctcca gaagataggg aaaaaggaga 2040 gtttagacca ccacgtggag ttaaaccgat ccgtacaact aagataatcg cgagaataca 2100 atcggaggat ccagataatc agattttagt atcgcctgta gatggaagtg atctcgcatt 2160 cataaacacg catttatctg gtgaaaactc aacattagtt gcaaattcga tgcacaattt 2220 ggcaattggt actattatac aagaggaggt gaaacatcgg tgcgctggat taatctcatt 2280 tctatctgaa cagtatgtag gcgatgatac tttgttttat actcaaccat gtatttctac 2340 ggagcatgat tttgactgta taattcgcgt aatttttgat acaattgaaa gatgcggtca 2400 tattgcttct gcttcaaaaa caatcatagc tcccttttcc gttgagaaaa cgcaaacaca 2460 tgctaaacaa ggaatatata taccgcagga tagaatgatg ttgatctcgt ctgaaagacg 2520 aaaggatatc gaggatgtcc gaggctatct caaatcacaa gttcaaactt tgactactaa 2580 aatttcaagg gggttttctc acaaattggc gagaatgatt ttaatgttga aaacatcatt 2640 agtcggcttc cggaaattga aacgaaccat tttcgccgac ggagtgtata gggatagacg 2700 ctttgattct gatgatgagg atggttttac tatgtattta attcgagatc cattatgtgc 2760 tttcctccca gttgaatgga atggagttgg agcttattat gaatcgctta atatagttat 2820 gaccgaagat atattcttag atcttttgca aacgggtaat gagtttgttc gacatctagc 2880 tggttttatt aatggtactc taccgttctg gaatgaaaca gaagcggata aacgacagat 2940 aggtactgat gctaagatga gtttctttac caagatggca agacccgctg ttcaaagtgt 3000 gctgaatagc gacgaactaa cagatttagt aaaacaatta ccgttaggag attatagtcc 3060 aacgaacata tcgaaaacta tgatgcattc agctttattg aaagaatcgt cggcgcgtag 3120 catattgacg ccaacttatg aatcggaata tcagcgactc ctaaatgttc gggaggaaaa 3180 aagtttcaaa atgtttagcc atgatctaga actgagtacg aactatatta aaatgtttga 3240 cgttcagtat tcgtctggag tgcaacgcca tttttatttt ccagatcaga atttatcgcc 3300 ctcttttttc ttacagaaga atttattagg gccaaggatg agcacacgag taaggatgtc 3360 atatgttgac aggattgatt cgattctgcg aggtgatgtt gtcatgcgtg ggtttattac 3420 tggtaatgcg ataattaaca tcttagaaaa gataggacac actcataatg cagcagatct 3480 ttcgatgctg ttccagataa tgaatatcga gtcacgtgtg gctgatagac ttgcggaata 3540 tatttcagct gagaggttac gttttgatgc aatgaaactg cttaagagag gcatatgtgg 3600 tgatgagttt tctatgtccc tagatgtgtg tacgcaagaa atgtctgata attttattag 3660 atacccgaaa gaatttacaa agacagagca ggatgcggcg attttgtatg catcgcaact 3720 tctgatgatt cgggcggcac atggacatca tccgggtata cttataatta atgcttctgc 3780 agaagagagg caaaaattta aagttagagc ggccagattc aaagctcatt tgcctaaatt 3840 acgattaatt cgtagattaa tacaaaccga acgattgtca gcacgcatgg ttcagaatca 3900 atttgtttag cgtcaccaaa taacacttac 3930 //