ID AB015146; SV 1; linear; genomic RNA; STD; VRL; 6423 BP. XX AC AB015146; XX DT 03-DEC-1999 (Rel. 61, Created) DT 30-MAY-2006 (Rel. 87, Last updated, Version 4) XX DE Cucumber green mottle mosaic virus genomic RNA, complete genome. XX KW . XX OS Cucumber green mottle mosaic virus OC Viruses; Riboviria; Virgaviridae; Tobamovirus. XX RN [1] RP 1-6423 RA Nishiguchi M.; RT ; RL Submitted (29-MAY-1998) to the INSDC. RL Masamichi Nishiguchi, Ehime University, Faculty of Agriculture; Tarumi RL 3-5-7, Matsuyama, Ehime 790-8566, Japan (E-mail:mnishigu@agr.ehime-u.ac.jp, RL Tel:81-89-946-9816, Fax:81-89-977-4364) XX RN [2] RX DOI; 10.1007/s007050070110. RX PUBMED; 10948983. RA Tan S.-H., Nishiguchi M., Murata M., Motoyoshi F.; RT "The genome structure of kyuri green mottle mosaic tobamovirus and its RT comparison with that of cucumber green mottle mosaic tobamovirus"; RL Arch. Virol. 145(6):1067-1079(2000). XX DR MD5; fbf81d8b022d8f58b980f83a0e3397d6. DR EuropePMC; PMC2698906; 19473520. DR EuropePMC; PMC5871769; 29593293. DR RFAM; RF01072; TMV_UPD-PK3. XX FH Key Location/Qualifiers FH FT source 1..6423 FT /organism="Cucumber green mottle mosaic virus" FT /strain="watermelon" FT /mol_type="genomic RNA" FT /db_xref="taxon:12235" FT 5'UTR 1..60 FT /note="5' non-coding region" FT CDS 61..5007 FT /codon_start=1 FT /transl_except=(pos:3493..3495,aa:OTHER) FT /product="RNA replicase" FT /note="186K protein" FT /note="readthrough product" FT /db_xref="GOA:Q9IR66" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9IR66" FT /protein_id="BAA87619.1" FT /translation="MANINEQINNQRDAAASGRNNLVSHLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDVVTQHVQRHKGSGGCRPLPT FT FQIDAFRRYDNSPCAVTCSDVFQECSYDSGSGGDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGTYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATNDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTKXQLMQNSLYVHRNIFLPVSKTG FT FYTDMQEFYDRCLPGNSFVLNDFDAVTMRLRDNEFNLQPCRLTLSNLDPVPALVKSEAQ FT NFLIPVLRTACERPRIPGLLENLVAMIKRNMNTPDLAGTVDITNMSISIVDNFFSSFVR FT DEVLLDHLDCVRASSIQSFSDWFSCQPTSAVGQLANFNFIDLPAFDTYMHMIKRQPKSR FT LDTSIQSEYPALQTIVYHPKVVNAVFGPVFKYLTTKFLSMVDSSKFFFYTRKKPEDLQE FT FFSDLSSHSDYEILELDVSKYDKSQSDFHFSIEMAIWEKLGLDDILAWMWSMGHKRTIL FT QDFQAGIKTLIYYQRKSGDVTTFIGNTFIIAACVASMLPLDKCFKASFCGDDSLIYLPK FT GLEYPDIQATANLVWNFEAKLFRKKYGYFCGKYIIHHANGCIVYPDPLKLISKLGNKSL FT VGYEHVEEFRISLLDVAHSLFNGAYFHLLDDAIHELFPNAGGCSFVINCLCKYLSDKRL FT FRSLYIDVSK" FT CDS 61..3495 FT /codon_start=1 FT /product="RNA replicase" FT /note="129K protein" FT /db_xref="GOA:Q9QNC1" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9QNC1" FT /protein_id="BAA87620.1" FT /translation="MANINEQINNQRDAAASGRNNLVSHLASKRVYDEAVRSLDHQDRR FT PKMNFSRVVSTEHTRLVTDAYPEFSISFTATKNSVHSLAGGLRLLELEYMMMQVPYGSP FT CYDIGGNYTQHLFKGRSYVHCCNPCLDLKDVARNVMYNDVVTQHVQRHKGSGGCRPLPT FT FQIDAFRRYDNSPCAVTCSDVFQECSYDSGSGGDNHAVSLHSIYDIPYSSIGPALHRKN FT VRVCYAAFHFSEALLLGSPVGNLNSIGAQFRVDGDDVHFLFSEESTLHYTHSLENIKLI FT VMRTYFPADDRFVYIKEFMVKRVDTFFFRLVRADTHMLHKSVGHYSKSKSEYFALNTPP FT IFQDKATFSVWFPEAKRKVLIPKFELSRFLSGNVKISRMLVDADFVHTIINHISTYDNK FT ALVWKNVQSFVESIRSRVIVNGVSVKSEWNVPVDQLTDISFSIFLLVKVRKVQIELMSD FT KVVIEARGLLRRFADSLKSAVEGLGDCVYDALVQTGWFDTSSDELKVLLPEPFMTFSDY FT LEGTYEADAKIERESVSELLASGDDLFKKIDEIRNNYSGVEFDVEKFQEFCKELNVNPM FT LIGHVIEAIFSQKAGVTVTGLGTLSPEMGASVALSNTSVDTCEDMDVTEDMEDIVLMAD FT KSHSYMSPEMARWADVKYGNNKGALVEYKVGTSMTLPATWAEKGKAVLPLSGICVRKPQ FT FSKPLDEEDDLRLSNMNFFKVSDLKLKKTITPVVYTGTIRERQMKNYIDYLSASLGSTL FT GNLERIVRSDWNGTEESMQTFGLYDCEKCKWLLLPAEKKHAWAVVLASDDTTRIIFLSY FT DESGSPIIDKKNWKRFAVCSETKVYSVIRSLEVLNKEAIVDPGVHITLVDGVPGCGKTA FT EIIARVNWKTDLVLTPGREAAAMIRRRACALHKSPVATNDNVRTFDSFVMNRKIFKFDA FT VYVDEGLMVHTGLLNFALKISGCKKAFVFGDAKQIPFINRVMNFDYPKELRTLIVDNVE FT RRYVTHRCPRDVTSFLNTIYKAAVATTSPVVHSVKAIKVSGAGILRPELTKIKGKIITF FT TQSDKQSLIKSGYNDVNTVHEIQGETFEETAVVRATPTPIGLIARDSPHVLVALTRHTK FT AMVYYTVVFDAVTSIIADVEKVDQSILTMFATTVPTK" FT CDS 4994..5788 FT /codon_start=1 FT /product="movement protein" FT /note="29K protein" FT /db_xref="GOA:Q786G0" FT /db_xref="InterPro:IPR001022" FT /db_xref="InterPro:IPR028919" FT /db_xref="UniProtKB/TrEMBL:Q786G0" FT /protein_id="BAA87621.1" FT /translation="MSLSKVSVENSLKPEKFVKISWVDKLLPNYFSILKYLSITDFSVV FT KAQSYESLVPVKLLRGVDLTKHLYVTLLGVVVSGVWNVPESCRGGATVALVDTRMHSVA FT EGTICKFSAPATVREFSVRFIPNYSVVAADALRDPWSLFVRLSNVGIKDGFHPLTLEVA FT CLVATTNSIIKKGLRASVVESVVSSDQSIVLDSLSEKVEPFFDKVPISAAVMARDPSYR FT SRSQSVSGRGKRHSKPPNRRLDSASEESSSVSFDDGLQSDHT" FT CDS 5763..6248 FT /codon_start=1 FT /product="coat protein" FT /note="17.4K protein" FT /db_xref="GOA:Q77G05" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q77G05" FT /protein_id="BAA87622.1" FT /translation="MAYNPITPSKLIAFSASYVPVRTLLNFLVASQGTAFQTQAGRDSF FT RESLSALPSSVVDINSRFPDAGFYAFLNGPVLRPIFVSLLSSTDTRNRVIEVVDPSNPT FT TAESLNAVKRTDDASTAARAEIDNLIESISKGFDVYDRASFEAAFSVVWSEATTSKA" XX SQ Sequence 6423 BP; 1654 A; 1255 C; 1529 G; 1985 T; 0 other; gttttaattt ttataattaa acaaacaaca acaacaacaa caaacaattt taaaacaaca 60 atggcaaaca ttaatgaaca aatcaacaac caacgcgacg ccgcggctag cgggagaaac 120 aatctcgtta gccacttggc gtcaaaaagg gtgtatgacg aggctgttcg ctcgttggat 180 catcaagaca gacgcccaaa aatgaacttt tctcgtgtgg tcagcacaga gcacaccagg 240 cttgtaaccg atgcgtatcc ggagttttcg attagcttta ccgccaccaa gaactctgta 300 cactcccttg cgggtggtct gaggcttctt gaattggaat atatgatgat gcaagtgccc 360 tacggctcac cttgttatga catcggcggt aactatacgc agcatttgtt caaaggtaga 420 tcatatgtgc attgctgcaa tccgtgcctg gatcttaaag atgttgcgag gaatgtgatg 480 tacaacgatg tggtcacaca acatgtacag aggcacaagg gatctggcgg gtgcagacct 540 cttccaactt tccagataga tgcattcagg aggtacgata attctccctg tgcagtcacc 600 tgttcagacg ttttccaaga gtgttcctat gattctggga gtggtgggga taatcatgca 660 gtctcgttgc attcaatcta cgatatccct tattcttcga tcggacctgc tcttcatagg 720 aagaacgtgc gagtttgtta tgcagccttt cacttctcgg aggcattgct tttaggttcg 780 cctgtaggta atttaaatag tattggggct cagtttaggg tcgatggtga tgatgtgcat 840 tttcttttta gtgaagagtc tactttgcat tatactcata gtttagaaaa tatcaagtta 900 atcgtgatgc gtacttactt tcctgctgac gataggttcg tgtatatcaa ggagtttatg 960 gttaagcgtg tggatacttt tttctttagg ttggtcagag cagatacaca tatgcttcat 1020 aaatctgtgg ggcactattc gaaatcgaaa tctgagtatt ttgcgctgaa tacccctccg 1080 atcttccaag acaaagccac gttttctgtg tggtttcctg aagcgaagcg caaggtgttg 1140 atacccaagt ttgaactttc gagattcctt tctgggaatg tgaaaatctc taggatgctt 1200 gtcgatgctg atttcgtcca taccattatt aatcacatta gcacgtatga taacaaggcc 1260 ttggtgtgga agaatgttca gtcgtttgtg gaatccatac gctcaagagt aattgtaaac 1320 ggagtttcgg tgaaatccga atggaacgta ccggttgatc agctcactga tatctcgttc 1380 tcgatattcc ttctcgtgaa ggttaggaag gtacagattg agttaatgtc cgataaagtt 1440 gtaatcgagg cgaggggctt gcttcggagg ttcgcagaca gtcttaaatc cgccgtagaa 1500 ggactaggtg attgcgtcta tgatgctcta gttcaaaccg gctggtttga cacctctagc 1560 gacgaactga aagtattgct acctgaaccg tttatgacct tttcggatta tcttgaaggg 1620 acgtacgagg cagatgcaaa gatcgagaga gagagtgtct ctgagttgct cgcttccggt 1680 gacgatttgt tcaagaaaat cgatgagata agaaacaatt acagtggagt cgaatttgat 1740 gtagagaaat tccaggaatt ttgcaaggaa ctgaatgtta atcctatgct aattggccat 1800 gttatcgaag ctattttttc gcagaaagct ggggtaacag taacgggtct gggtactctc 1860 tctcctgaga tgggtgcttc tgttgcgtta tccaatacct ctgtagatac atgtgaagat 1920 atggatgtaa ctgaagatat ggaggatata gtgttgatgg cggacaaaag tcattcttac 1980 atgtcccctg aaatggcgag atgggctgat gtgaaatacg gcaacaataa aggggcccta 2040 gtcgaataca aagtcggaac ctcgatgact ttacctgcca cctgggcaga gaagggtaag 2100 gctgtcttac cgttgtcggg gatctgtgtg aggaaacccc aattttcgaa gccgcttgat 2160 gaggaagacg acttgaggtt atcaaacatg aatttcttta aggtgagcga tctgaagttg 2220 aagaaaacta tcactccagt tgtttacact gggaccattc gagagaggca aatgaagaat 2280 tatattgatt acttatcggc ctctcttggt tctacgctgg gtaatctgga gagaattgtg 2340 cggagtgatt ggaacggtac agaggagagt atgcaaacgt tcgggttgta tgattgcgaa 2400 aagtgcaagt ggctattgtt accggccgaa aagaagcacg catgggctgt ggttctagca 2460 agtgatgata ccactcgcat aatcttcctc tcatatgacg aatctggttc tcccataatt 2520 gataagaaaa actggaagcg atttgctgtc tgctccgaga ccaaagtcta tagcgtaatt 2580 cgtagtttag aggtactaaa taaggaagca atagtcgacc ccggggttca tataacatta 2640 gttgacggag tgccgggttg tggaaaaacc gccgaaatta tagcgagggt caattggaaa 2700 actgatctag tattgactcc cgggagggag gcggctgcta tgattaggcg gagagcctgc 2760 gccctgcaca agtcacctgt ggcaaccaat gacaacgtta gaactttcga ttcttttgtg 2820 atgaatagga aaatcttcaa gtttgacgct gtctatgttg acgagggtct gatggtccat 2880 acgggattac ttaattttgc gttaaagatc tcaggttgta aaaaagcctt cgtctttggt 2940 gatgctaagc aaatcccgtt tataaacaga gtcatgaatt ttgattatcc taaggagtta 3000 agaactttaa tagtcgataa tgtagagcgt aggtatgtaa cccataggtg tcctagagat 3060 gtcactagtt ttcttaatac tatttacaaa gccgctgtcg ctactactag tccggttgta 3120 cattctgtga aggcaattaa agtgtcaggg gccggtattc tgaggcccga gttgacaaag 3180 atcaaaggaa agataataac gtttactcaa tctgataagc agtccttgat caagagtggg 3240 tacaatgatg tgaatactgt gcatgaaatt cagggagaaa cctttgaaga gacggcggtt 3300 gtgcgtgcca ccccgactcc gataggttta attgcccgtg attcaccaca tgtactagtg 3360 gccttaacga ggcacaccaa ggcaatggtg tattatactg ttgtgttcga tgcagttaca 3420 agtataatag cggatgtgga aaaggtcgat cagtcgatct tgaccatgtt tgctaccact 3480 gtgcctacca aatagcaatt aatgcagaac tcactgtatg tccatcgtaa tattttcctc 3540 cctgttagta aaacggggtt ttatacagac atgcaggagt tctatgacag atgccttcct 3600 gggaattcct tcgtgctgaa tgatttcgac gccgtaacca tgcggttgag ggataacgaa 3660 tttaacctac aaccttgtag gctaacctta agtaatttgg atccggtacc cgctttggtt 3720 aagagtgaag cgcagaattt tctgatcccc gttttgcgta cggcctgtga aaggccgcgc 3780 attccaggtc ttcttgagaa tcttgtagct atgataaaga ggaatatgaa tactcctgat 3840 ctagctggga ccgtggatat aactaacatg tcgatttcta tagtagataa cttcttttct 3900 tcttttgtta gggacgaggt tttgcttgat cacttagatt gtgttagggc tagttccatt 3960 caaagttttt ctgattggtt ttcgtgtcag ccaacctcgg cggttggcca gttagctaat 4020 ttcaatttca tagatttgcc tgcctttgat acttatatgc atatgattaa gaggcagccc 4080 aagagtcggt tagatacttc gattcagtct gaatatccgg ccttgcaaac tattgtttat 4140 caccctaaag tggtaaatgc agttttcggt ccggttttta agtatttgac caccaagttt 4200 cttagtatgg tagatagttc taagtttttc ttttacacta ggaaaaaacc agaagatctg 4260 caggaatttt tctcagatct ctcttcccat tctgattatg agattcttga gcttgatgtt 4320 tctaaatatg acaagtcgca atccgatttc cacttctcta ttgagatggc aatttgggaa 4380 aaattagggc tggacgatat tttggcttgg atgtggtcta tgggtcacaa aagaactata 4440 ctgcaagatt tccaagccgg gataaagacg ctcatttact atcaacggaa gtctggtgat 4500 gtaactactt ttataggtaa tacctttatt atcgcagcgt gtgtagctag tatgttgccg 4560 ttagataagt gttttaaagc tagtttttgt ggtgatgatt cgctgatcta ccttcctaag 4620 ggtttggagt atcctgatat acaggctact gccaaccttg tttggaattt tgaggcgaaa 4680 cttttccgaa agaagtatgg ttacttctgt gggaagtata taattcacca tgccaacggc 4740 tgtattgttt accctgaccc tttaaaatta attagtaaat taggtaataa gagtcttgta 4800 gggtatgagc atgtcgagga gtttcgtata tctctcctcg acgtcgctca tagtttgttt 4860 aatggtgctt atttccattt actcgacgat gcaatccacg aattatttcc taatgctggg 4920 ggttgcagtt ttgtaattaa ttgtttgtgt aagtatttga gtgataagcg ccttttccgt 4980 agtctttata tagatgtctc taagtaaggt atcggtcgag aactcgttga aacctgagaa 5040 gtttgtcaaa atctcttggg tcgataagtt gctccctaac tatttttcta ttcttaagta 5100 tttatctata actgacttta gtgtagttaa agctcagagc tatgaatccc tcgtgcctgt 5160 caagttgttg cgtggtgttg atcttacaaa acacctttat gtcacattgt tgggcgttgt 5220 ggtttctggt gtatggaacg taccggaatc ctgtaggggt ggtgctactg ttgctctggt 5280 tgacacaagg atgcattctg ttgcagaggg aactatatgc aaattttcag ctcccgccac 5340 cgtccgcgaa ttctctgtta ggttcatacc taattattct gtcgtggctg cggatgccct 5400 tcgcgatcct tggtctttat ttgtgagact ctctaatgta ggtattaaag atggtttcca 5460 tcctttgacc ttagaggtcg cttgtttagt cgctacaact aactctatta tcaaaaaggg 5520 tcttagagct tctgtagtcg agtctgtcgt ctcttccgat cagtccattg tcctagattc 5580 tttatccgag aaagttgaac ctttctttga taaagttcct atttcggcgg ctgtaatggc 5640 aagagacccc agttataggt ctaggtcgca gtctgtcagt ggtcgtggta agcggcattc 5700 taaacctcca aatcggaggt tggactctgc ttctgaagag tccagttctg tttctttcga 5760 cgatggctta caatccgatc acacctagca aacttattgc gtttagtgct tcttatgttc 5820 ccgtcaggac tttacttaat tttctagttg cttcacaagg taccgccttc cagactcaag 5880 cgggaagaga ttctttccgc gagtccctgt ctgcgttacc ctcgtctgtc gtagatatta 5940 attctaggtt cccagatgcg ggtttttacg ctttcctcaa cggtcctgtg ttgaggccta 6000 tcttcgtttc gcttctcagc tccacggata cgcgtaatag ggtcattgag gttgtagatc 6060 ctagcaatcc tacgactgct gagtcgctta acgctgtaaa gcgtactgat gacgcatcta 6120 cggccgctag ggctgaaata gataatttaa tagagtctat ttctaagggt tttgatgttt 6180 atgatagggc ttcatttgaa gccgcgtttt cggtagtctg gtcagaggct accacctcga 6240 aagcttagtt tcgagggtct tctgatggtg gtgcacacca aagtgcatag tgctttcccg 6300 ttcacttaaa tcgaacggtt tgctcattgg tttgcggaaa cctctcacgt gtgacgttga 6360 agtttctatg ggcagtaatt ctgcaagggg ttcgaatccc ccctttcccc gggtaggggc 6420 cca 6423 //