ID AB014728; SV 1; linear; genomic RNA; STD; VRL; 2774 BP. XX AC AB014728; XX DT 14-DEC-1998 (Rel. 58, Created) DT 14-APR-2005 (Rel. 83, Last updated, Version 5) XX DE Chuzan virus gene for inner capsid (core) protein VP3, complete cds. XX KW inner capsid (core) protein VP3. XX OS Chuzan virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-2774 RA Yamakawa M.; RT ; RL Submitted (22-MAY-1998) to the INSDC. RL Makoto Yamakawa, National Institute of Animal Health, Department of Exotic RL Diseases; Josuihoncho 6-20-1, Kodaira, Tokyo 187-0022, Japan RL (E-mail:yamato@ed.affrc.go.jp, Tel:+81-42-321-1441(ex.43), RL Fax:+81-42-325-5122) XX RN [2] RX PUBMED; 9934703. RA Yamakawa M., Furuuchi S., Minobe Y.; RT "Molecular characterization of double-stranded RNA segments encoding the RT major capsid proteins of the Palyam serogroup orbivirus that caused an RT epizootic of congenital abnormalities in cattle"; RL J. Gen. Virol. 80:205-208(1999). XX DR MD5; ea7f2c95f510dba2b238bbfede996283. XX FH Key Location/Qualifiers FH FT source 1..2774 FT /organism="Chuzan virus" FT /segment="3" FT /serotype="Palyam" FT /mol_type="genomic RNA" FT /db_xref="taxon:77204" FT CDS 14..2728 FT /codon_start=1 FT /product="inner capsid (core) protein VP3" FT /db_xref="GOA:Q9YN52" FT /db_xref="InterPro:IPR002614" FT /db_xref="InterPro:IPR016029" FT /db_xref="UniProtKB/TrEMBL:Q9YN52" FT /protein_id="BAA34936.1" FT /translation="MDAQRTKDENKKDEPGAPYLDGDVLSRDNGALLSIFALQEIMQKV FT RRNQQELATHAPEIDGTIPEVALIIPGIRDLLKTKAYRVEKKPLKSFRAVSMQSTDFFL FT RVDTYYERMSKVGEMVDETKPEAFYETILKKIRHLRQEGAFLLQDIETHNHRGAEVAAL FT DALGVEIDNLMPNMTAVDRQIVQDMINGMIIENAQIADRNVDVYMCAMSDPVYRVHNRL FT QGYIESVQQAVIQRAIQWLVRLGQRKRIQFNTDFMTDFRRADTIWILTHELPPNANVIW FT EVPRSYITNLIMNIALCLPHGEYLAPNPRITSITITQRITQTNPFSLISGMTPTAQQMD FT DVKKIYLALMFPNQIILDLKADPNHAIDPVIRMVSGVIGHLMFTFGPRFTNITQTMATL FT LDSALNDFLLYMYNNRVRVDYGASGQPLDFQIGGRAQYDANRFRGNIQTGSGYNGWGLV FT DVEFRQPSPYDLVQRHIRYCDLDSREIIDPRTFGVNMNYPNYREMIRILTAAGKEQEAA FT FFRAMLPYHMIRFARLNQIINEDLLSGFSLPDRLFNAMIGNMQQGVFEEVEPITLEISW FT ASIWFAFNRRFEPIARSELLNIAPMIESIYASELSIIQLDVRQLRLMRARVPEVVVNAS FT PSQFWRAAIKVSPEPIRALLNLSQSFSFINVRDIIRWCDSRALQRSLAYELEREVWEIA FT GDFQELMLVNDVYFHRSVIPEPRLDDINEFRRIGFYTTNMLDAPPPLLATTLYTYEAAM FT LQANMGQFKAALRGILDDDGWVRFGGMLRNVTIEFFSSLPDASWLQSLPFEYKEEERDG FT LRYASIKYGSTAKVFYIIYNVDYSNTPDSLISINPVYTMTKIYMNKRIVSKIRVPDALS FT CVNKRVVSYKKKMRLMDVTEALKMGVQLAAPTV" XX SQ Sequence 2774 BP; 892 A; 454 C; 636 G; 792 T; 0 other; gttaaattgt aggatggatg ctcaacgtac taaggatgaa aacaaaaaag atgaacctgg 60 agctccctat ttggatggtg acgtgttatc cagagataat ggggctctac tatcaatttt 120 cgcgctgcaa gagatcatgc aaaaagtcag acggaatcaa caggaattag caacacacgc 180 gccagagatt gatggaacta taccagaagt agcactaata ataccaggaa tccgggattt 240 acttaaaact aaagcctaca gagtagagaa gaagccatta aaaagttttc gggcagtgag 300 catgcaaagt accgattttt tcttgagagt tgacacttac tatgagagga tgtcaaaggt 360 aggtgaaatg gtagatgaaa caaagccaga ggcgttttat gagacaattc tgaagaaaat 420 aaggcattta aggcaagagg gtgctttttt attacaagat attgagacgc ataatcatcg 480 tggagcagag gttgcggcgt tagatgcatt gggtgttgag atcgataatt taatgccaaa 540 tatgactgcg gtggatagac aaatagttca agatatgatt aatgggatga ttatcgaaaa 600 tgctcaaata gcagatcgga atgtcgatgt atatatgtgt gcaatgtcgg atccagtcta 660 tcgagtacat aataggttac agggatatat agaaagtgtg cagcaagccg taatacagag 720 agcgatacag tggttagtga gattaggaca gaggaagagg atacaattta acacagattt 780 tatgaccgat tttcggaggg cggatactat atggatactt actcatgaac taccacctaa 840 cgctaatgta atttgggagg tgccgcgatc ctacataacg aatttgatca tgaacatagc 900 attgtgctta ccacatggag aatatttagc gcctaaccct agaataacat caataactat 960 tacgcagaga attacacaaa ctaatccatt ttcattgata tcaggaatga ctcctaccgc 1020 acaacagatg gatgatgtta aaaagatata tttggcatta atgtttccga atcagataat 1080 tctcgactta aaagctgacc caaatcacgc aattgatcca gtaattcgga tggtttcagg 1140 ggttattggg catttaatgt tcacctttgg tccacgcttc accaacatta ctcaaacaat 1200 ggctacatta ttagattcag ctttaaatga ttttttacta tatatgtata ataatagagt 1260 tagagtcgat tatggtgcga gcggacagcc tttagatttt caaattggag gacgtgccca 1320 atatgatgca aatcgtttca ggggaaatat acaaaccgga tcgggataca acggatgggg 1380 gttggtagat gtggagttta gacagcccag tccgtacgac ttggtgcaaa ggcatattcg 1440 atattgtgat ttagattcac gtgagataat cgatccacgc actttcggtg taaatatgaa 1500 ttatccaaat tatagggaaa tgattcgaat tctaacagcg gcaggaaaag aacaggaagc 1560 ggcctttttt cgtgcaatgt tgccgtatca catgattagg tttgcgagat tgaatcagat 1620 tatcaatgaa gatttgctga gtggattttc tttaccagat aggttattta atgccatgat 1680 tgggaacatg cagcaaggtg tctttgaaga agtagagcca ataactcttg aaataagttg 1740 ggcgtcgatc tggttcgcat ttaataggcg ttttgaacca attgctaggt ctgaattatt 1800 gaatattgcc ccgatgattg aatcaatcta tgcctcggag ttatcgataa tacaattaga 1860 tgttagacaa ctacgactaa tgcgtgccag agtaccagaa gtcgttgtaa acgcaagtcc 1920 gagccaattc tggcgagctg cgattaaggt ttcaccagaa ccgattagag cattacttaa 1980 cctatcacaa agttttagtt ttattaacgt tcgtgatatc atccgttggt gtgatagtcg 2040 tgcgttgcaa agatcattgg cttacgagtt ggaacgtgag gtatgggaga ttgcgggaga 2100 tttccaggaa ttaatgttag taaacgatgt gtattttcat cgtagcgtga tacctgaacc 2160 aagattggat gatatcaatg aatttagaag aattggattt tatactacta acatgcttga 2220 tgcgccgcca ccccttttag ctacaacatt gtatacgtat gaggcagcga tgttacaagc 2280 aaatatggga caattcaaag ctgctctgcg gggtatatta gatgatgatg gttgggttag 2340 atttggtggt atgttgagaa atgtaacaat cgaatttttt agttcgttac ctgacgcatc 2400 ttggttacaa tcattacctt tcgagtataa ggaagaggaa cgtgacggac taagatatgc 2460 tagcattaag tatggatcca ctgcaaaagt tttctatatt atatacaacg ttgactattc 2520 aaatacacct gattcgttaa tttcgattaa tccagtatac actatgacaa aaatatatat 2580 gaataaacga attgtatcga aaattcgtgt gcctgatgcg ttatcttgtg ttaataaaag 2640 ggttgtttca tataagaaga aaatgagatt gatggatgta acagaagcct taaagatggg 2700 cgttcagctg gcggcgccaa ctgtatagga ctgaccaacc tgtatagaac ggcgagcccc 2760 tacatcacac ttac 2774 //