ID AB010996; SV 1; linear; genomic RNA; STD; VRL; 4756 BP. XX AC AB010996; XX DT 20-FEB-1998 (Rel. 54, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 6) XX DE Orthotospovirus tomatomaculae genomic RNA, complete sequence. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RA Ohnishi J., Kirita M., Hosokawa D., Tsuda S.; RT "Sequence analysis for M RNA segment of tomato spotted wilt tospovirus RT isolated in Japan"; RL Nippon Shokubutsu Byori Gakkaiho 63:277(1997). XX RN [2] RP 1-4756 RA Tsuda S.; RT ; RL Submitted (09-FEB-1998) to the INSDC. RL Contact:Shinya Tsuda Plant Biotechnology Institute, Ibaraki, Lab. of RL Biological Control; 3165-1 Ago, Iwama, Ibaraki 319-0292, Japan XX DR MD5; f7a72396bcb3c2d1e60c9a0b2413f29d. XX FH Key Location/Qualifiers FH FT source 1..4756 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /mol_type="genomic RNA" FT /db_xref="taxon:3052585" FT CDS 101..1009 FT /codon_start=1 FT /product="non-structual protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:O55646" FT /protein_id="BAA24893.1" FT /translation="MLTLFGNKGSSKSARKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDTSKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1264..4671) FT /codon_start=1 FT /product="G2-G1 polyprotein precursor" FT /db_xref="GOA:O55647" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/Swiss-Prot:O55647" FT /protein_id="BAA24894.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREGESIIPIFAESNTQKT FT ISVSDLPNNCLNASSLKCEIKGVSTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPITKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTAGINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLIGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSSECPILSKETDHGYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLIILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCAAHPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSKITEEVPYENALFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLVIYFCSILTTICKGYVKNESYKSRSKIEDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4756 BP; 1522 A; 855 C; 840 G; 1539 T; 0 other; agagcaatca gtgcgtcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactc ttttcggtaa 120 taaggggtct tctaagtctg ccagaaagga tgaaggtcct ttagtttcac ttgctaaaca 180 taatggtaat gttgaagtct ctaagccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatacatcca aaggaaagat actgttgaac acagaaggaa catcttcctt 300 tggaacctat gagtctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctctttg ttggcaacgg 420 gaagcaaaac gcaaataagg tcatcaagat ctgtccaact tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacaggaaa 540 acttgtggtt gctctggtcg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaggggact ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccgaa 660 aatgaataac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaagggggtt tcttttggta gtgtcatgta ttcttggaca aaagagtttt gtgattcacc 780 cagagctgat aaagataaaa gttgcatggt catacctcta aacagagcca ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaatg 1020 tcacttattt aagcttaaat ttctgtcaat tttgcatttt aaatcaaaaa ccaaaacaaa 1080 aaacaaaaaa tcaaaaacaa aaaacaaaaa caaaataagg ctgaaaagcc aaactttggt 1140 ccgaagactc tttttgttgt tttttgtttt ttgtattttt ttgtttgttt tttgttcatt 1200 ttatatatac ataatctgac taatgtagaa gattgaatca aatttagcct gtgacaagca 1260 gactcagaca aggtgagaga aatccatagg tggccttcgt cttgtcattg tatctttcat 1320 taacatagga gctttgatct cagaatcatc atcatcctct atcttggatc tagatttata 1380 agattcattc ttgacatatc ctttacaaat ggttgttaga atagaacaga aataaatcac 1440 aaggaaaatg aatgcaataa gcaatatcac tctgatagta tcaaaaaatg agccaaaata 1500 acttgcaatg aaattgaatg ggcttttaat ataatcccag aagccccatg ctgaagaatc 1560 agaattatat tgttgttctt catgagcata ctcatcattt tgatctatta tgttctctgg 1620 ttcttctaca ataacattat tgaccagaac ttccacagaa atatccggat tgccttctgg 1680 atacaacgtc attttcttct tgtccggatt agcagaacaa aacattgtta tgttgtattt 1740 attagatcct tttttaacag ccagctgata agtagataga gagcaagcat ctatagaaat 1800 tgcagtagaa aatgtcaaat ctgagaaaaa ttccaaaatg caagataaac cttgaccgca 1860 tagaagacag ccgttgcaat ttaagcttgt tgaagttatg gaaggtctct taggagcaac 1920 tttaaaaaga tcagatggaa gatcaacgac aatcttaagt ttccctaaac tgaaagcttt 1980 ttccaagaaa aaactagaga aatctttgaa actaacggga atatctgata tttgctctaa 2040 accagatcta aatctgtatg tatcatatcc gcatgtttta atagtgattg attttttccc 2100 tattgctgca caatcccaag acatgtcatc tccttctaga gttttcttag taaaaatagg 2160 cactccatca tgagtcaatt gtgggtgacc aaacattttc acaggatcat tcaagtttgc 2220 aatatttcca gaataaatat ggctgtcagg tccatgagct atcagttcac ctatagtgat 2280 accatcattg tgcaaatctg cttgtatatc agcttgaaac aaggcatttt cataaggaac 2340 ctcttcagta atctttgagc actgacctcc taaaatacca gaaatacaaa catctgccac 2400 tatagttgat tttagcactg aataaattct gtatgattta tccatgtcat agatattccg 2460 acagaatccg catgtagcac cttcattaat tgcaaaacac caagcttctt cacatcccca 2520 ataagaagtt ggtgttatac aaaaatcttg gaaaccagtt aaagcttgat tttttctgca 2580 agtgtcacag tttcctgtac aagtggaata aaaatctgtg tgagtgcttt ggataggagc 2640 tgttgtgtat ttttctgaca cttcataatg aattcctaca cttttgatat aaatcacaaa 2700 tttttttgct gtttctgagg tcttatcatt taacatgaat atagtccctc ctcctcctaa 2760 aagagattgt tctatcatgt atctatattt cccgtctaca acagaatcaa agatcaatga 2820 ttgtctgggc agaatgttct ctggtatgct tgtttcattt ttgtttagag aatctcctgc 2880 aatcattccg gaaattttgt ctgtacgatt ataagaatct attataccat tcctcaatct 2940 cttagcctca tacagaccaa ccgatgttaa ccctaaagag cttcctgtat aatctgaaaa 3000 cccattatac aaaggtttgt tccgaaataa atctaggtac tcgcaaccca gtctgcattt 3060 tataagatta tcaatcgatg ggtgtgcagc acaattctgg ttctctatgc aatcattagg 3120 accttctata acaatgttag taccaaagat actttctata atcttatctt ctttcacatt 3180 acagtaacat tgatcttttt ctgggcattt ttcaaatttg cttgtaacca aaaatggaca 3240 gcctggaaca taaaaacatc cactcaagca ttgggtagtt tgagccatag acatgggcat 3300 ttgagacaaa atgatcaaac ctattaagat ttcagtcaca aatttcagca aactaaagct 3360 cagcttagtg ttcactatta gatggaacca ttccatgcta gtccacttgt gtttgttgta 3420 gccatgatct gtttctttgg acaatatggg acactctgaa gaatgttctt ttgaagcttt 3480 gcttttgttg cagatgcaaa ttttagtaca ttcatgtgtg attatgcaca aattgccaca 3540 gttagaacat ttaaatggaa aatatttcca taagcaattt atgagcaaca aaatagggta 3600 tgtgatcaag cctataagat cataccagag aaagaggggt ttggttgtct tgtttaccaa 3660 ccaccggata gggaaataga tcaacaaagc tatcaatatt aatcttatcc aagaaaaatt 3720 gatgccagct gtttgtttat aaatgctttt tgaatatttg attatacaat ctctaactct 3780 tttgtttgtt tttggtattt tagctgattt gtcaccgcac aggagattgt gctcaccatc 3840 caacatttct tcagtaaaag tgatgcttgc tgatccagaa aaggatatga ccttgtgttc 3900 cacattttca ccaggctttt ttatcaaata acccatgatc ttctcggggc tagtgatgct 3960 aacagtatag ggattggcaa agttcgattt agttattttg cagtcaccag ataactttac 4020 agtttgtaat gatactgttc cattagtggg gtacgagtta taagttatag gataattatc 4080 ttgtgtcaag ctttctgaaa tgaagaattt tgttccaact gaaaaatgcc ttttgttgtc 4140 aagtttggta atgggaataa cagggacttt ggagaatctc tttggcagat ttaaagaatt 4200 gtcacatttt tctaaacctt ccgctgaatc agaaacacag gaatatatga caccattatt 4260 ttccacttga taataaacat tataagtgga tacccctttt atctcacatt ttaatgaaga 4320 agcattcaag cagttattag gaagatctga gacagagatt gttttttgcg tattcgactc 4380 agcaaaaata gggatgattg attctccttc tcgtatctga cgggttccag gagtctgaga 4440 ttctagcatc agattagtta aagtctccaa gatagccttg cgttgaatcg atgcagcagt 4500 gggtacttca ttctcagcag aatcatcata aacctcagga tggtctccac gaattatttc 4560 tactttggca tctgtggctc tgaagatcaa gaatgccaac aagacagaac tcagggcaat 4620 tgtgaaaaga ctcactttta ccactagttc tagtagtttt aaaattctca tcttagacgt 4680 ctgctcagat tataatggtt atatgattaa ttgcaagatg tctggattaa tggtttttgt 4740 tggcactgat tgctct 4756 //