ID AB009958; SV 2; linear; genomic RNA; STD; VRL; 6794 BP. XX AC AB009958; XX DT 09-APR-1999 (Rel. 59, Created) DT 19-JAN-2005 (Rel. 82, Last updated, Version 4) XX DE Satsuma dwarf virus genomic RNA (RNA1) for polyprotein, complete cds. XX KW . XX OS Satsuma dwarf virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Sadwavirus. XX RN [1] RP 1-6794 RA Iwanami T., Kondo Y.; RT ; RL Submitted (19-DEC-1997) to the INSDC. RL Toru Iwanami, National Institute of Fruit Tree Science, Department of RL Citriculture,Okitsu; Okitsu, Shimizu, Shizuoka, 424-02, Japan RL (E-mail:tiwsw37@okt.affrc.go.jp, Tel:81-543-69-7110, Fax:81-543-69-2115) XX RN [2] RX PUBMED; 10092021. RA Iwanami T., Kondo Y., Karasev A.V.; RT "Nucleotide sequences and taxonomy of satsuma dwarf virus"; RL J. Gen. Virol. 80:793-797(1999). XX DR MD5; 8b9cdccfa0f4fbaacade3e5fa1447c33. DR EuropePMC; PMC2861173; 20229114. XX FH Key Location/Qualifiers FH FT source 1..6794 FT /organism="Satsuma dwarf virus" FT /segment="1" FT /isolate="S-58" FT /mol_type="genomic RNA" FT /db_xref="taxon:47416" FT CDS 301..6546 FT /codon_start=1 FT /transl_table=1 FT /product="polyprotein" FT /note="this polyprotein contains NTP-binding domain, FT protease and RNA polymerase." FT /db_xref="GOA:Q9WAL8" FT /db_xref="InterPro:IPR000605" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR014759" FT /db_xref="UniProtKB/Swiss-Prot:Q9WAL8" FT /protein_id="BAA76746.1" FT /translation="MEIYGFSPLSFQDTESWKNSAFAACRGCKTYPIEEVGTDGSVRIR FT ELPVGLVLKGVMAQYRSILWTQFVADPATTTVDRKSFDFWLFCRRAEAAQERAFRARQS FT KRAAKAAALDAEGLIDRSYKGRTYKVSTRGLSWKSVRAAQKAARNAAKNFGFAISANPF FT SALSALPSEGKGLSAGETPATVAEVAPQCFWAALRSLKREFSETPVEDLPFLGLVLPAL FT PQRNGELARTLRAQLRAHQAARVVASGVSLREIPRRTTTTVKVVVPRVTIPVVTFNGAV FT LHHPKHPVIVALLKRVTIRAKPICERRTYVRLVDGPGLFPSPRTPTLDLGFMEKVSELA FT TMPGDSIEKCIAIKCILSNDYNFKEDADMGDVLLSLQSKYTGGGDTAEHRGFISGALYG FT AGVCVVTSAWKFLDATLHASQIGTQISQILDYIQSGLAWLSSSYASIANFFTKGKVYIM FT ECLELVKAKLPSYLFSAEVGRYILLLLGVFLCLGLVNSLIYSVAPQYSLSFGTVCKISL FT GALALVGLGDLVAYLFNSPGAKLRAFVNIVCNMCGCKNFFAPSSDGEERSGFSVLSMMG FT AICALQSLLPANVSRFSWDCGKWAQTFKTGFDCHEKFATVCESLSVWLLSKVGLFKSSE FT SQAMQTILLSSGINTCGWLEKVAAFHSDVHSSQICIPDLLLRARQLIETGDTISDLLSN FT STVSLSFLLRERIKLALRELKEDHTQLQLAVDVSVSSECPFVLFFAGDSGVGKSTAMKK FT FREEVLDKLGYPKTARFYPRNPGEKFWSGYLRHTAVIYDDFAQIPQGDMTYDEAELIRI FT VTNAVVTVPMAIAEEKGRTFRSKFVFACTNRYCESEDAPLADEMAFRRRRHLYIHVARK FT PGVEPGPRGVDNLEFSEMDNRDSNGEPAYQLNDQGKRVLINQKLTYDQLLQLYFERYQA FT FKVLEGQLEGSVARAPSSSNYEGCDNWWTLVGSEAKFEAVYFNGEPVSEDDQLTQLGNY FT KTRYDILRARVILESIDYADCDFIIKNFSAMGEGIYHADPEVNATGQRHFSAMSPVTRR FT LICSCLKTRREDEIKSHSLLSKFKSLLTVPVDAWKAAPAWFKCISLLLVAGGVGYALCR FT AISGIIGIFRKGPAAASLALFSGGIGAVLRGDSPDDPREERDNPDVIVTKGRGKAIWAG FT AEIPEALEALRKSQVVLMGTGRKGEPVMCSALPITSHSVLCTTHEIEAFDPNQNMSLIV FT NNSIYSFVLIPGAIMYKRYDQPNLVDKVHELVRVDLPKNKGFSLNARAQFSEDFYDNGT FT AMKCWVVPNKNPAVADIMRKVDCEKSSQIIDIFASELSRSSGCEPVRQTQRFIYADGPA FT LNGHCGRLLCANLAGHWRVIGMCAGEGKNRAGVTKALYADIPHEFLRADNLNAVQRGAE FT LDAAILDRFSIPISECRKELTPMTTRLGYVVGQYPRALRKTSIVPSIIHDNLWRKPETE FT PTILGKIDDRSPFPYDPYATIGEKFVQEVGPIDLSVGSDASLVVANIGSSWKAVGKPQC FT PTVLTWEVAINGDAAIPYCERLPLSTSEGYPDSIQRNFGEKGKKRFFDLKGENVRVPTP FT ALMEELEVLERELQKEEVCLTCINTACAKDEKTAPKKVRVQPKTRIFEILPFQINIIIR FT RYLMFWMQLLMVAHDELPSKVGINVYSESWDRLLGRHTRLANHFTGDYSGFDTSTPRVL FT VYAIIDKINELADDGEVNQRTRRNIIRFVLNRYLISDGVLYEIHGGTPSGFAPTVMINS FT VVNEFYLKWSWIGLLKEAGYANQATLYAFHEATEISLYGDDNFVSVATPVASVYNLTTI FT SNFLGRIGVKLGDGAKTGTIKPFIPLEEVDFLKRQFVADSGSTAILCPLKKISIEERLF FT YVRGGQDEIAALELNIATALCEAFFHGKEYFSFLEGKIIEAMRKSGVALSRPLPTMESV FT RAWYMSQRGNTKIRSPSFEGLGTMSGILNIGLAEARSVGGVACFSGIEFRGRSDDHLMV FT IPTYIPGGWRTKQQQTYISFVRDSEKMAQVIKRVAHFSTVVATDKSMAYLVAICIAYSR FT GSISRMEVRCHVQNLKVAEMLLCNQICNFL" XX SQ Sequence 6794 BP; 1655 A; 1499 C; 1688 G; 1952 T; 0 other; ttgattcaag cgaagcagaa gccctgcaac aaaactaaat cttgtccctt ctttctctct 60 ctctaagcga caatcttttc ttgctttcaa atgacttctt tcttctcttg ctctatgatg 120 tgtgggatag cgcccacact acgaaactag ggatagcgcc ctagctccga ttattgggat 180 agcgcccaat attttctgtt aatatttcga tattttcatt ttgtaatttc gattacttat 240 atataataaa aaccaaaaag attttcttat ttccttaatt tcttttttgt ttgctttttc 300 atggagatct acggattctc ccccctctcc ttccaggaca ccgagtcctg gaagaactct 360 gctttcgcag cctgccgagg ctgcaagacc taccccatcg aggaggtagg tactgacgga 420 tccgtgagga tccgggagct cccggtgggg ctcgtgctga agggcgtcat ggcccaatac 480 cggtccattt tatggaccca atttgtggcg gaccccgcca ctaccaccgt ggaccggaag 540 tcctttgact tctggctctt ttgccgccgt gctgaggcgg cccaggaacg agcctttagg 600 gctcgtcagt ccaagcgagc cgccaaggcc gctgccctcg atgctgaggg cttaatcgat 660 cgctcctaca aggggcgaac ttataaggtc tccacaagag gcctgtcctg gaagtctgtg 720 cgagcagcac agaaggccgc acgaaatgcg gcaaaaaatt ttggatttgc catctcggcg 780 aatcctttct ctgctctttc cgccctcccg tctgaaggga agggcctttc tgcaggtgag 840 actcctgcta ctgttgctga ggtggcacct cagtgctttt gggccgcact gcggtcctta 900 aaaagggagt tttctgagac tcccgttgaa gacctgccct ttcttgggtt ggtcttgccc 960 gctctgcccc agcgtaatgg ggaacttgct cgcactttgc gggctcaatt gcgcgcgcac 1020 caagctgcgc gcgtggttgc aagcggggtt tccctgaggg aaatcccccg ccgcactacg 1080 accaccgtaa aggtggttgt tccacgcgtg accattcctg tggtcacctt taatggtgcg 1140 gtgttgcatc atcctaaaca cccggtgata gttgctctcc ttaagagagt gactatcaga 1200 gctaaaccta tttgcgagcg ccgaacttat gtgcgcctgg ttgatggtcc tggccttttc 1260 ccctctccac gaacccccac tctagatcta gggttcatgg agaaggtctc tgagttagct 1320 accatgcctg gcgacagcat tgaaaagtgt atcgcaatta aatgcatcct ctctaatgat 1380 tacaatttta aggaggatgc tgatatgggt gatgttctac tttccctaca atccaaatac 1440 actggtggtg gagacactgc ggaacaccgt ggatttatat ccggtgcact ctacggtgct 1500 ggagtttgcg ttgttacttc cgcttggaag tttctggatg cgacgctcca tgccagccaa 1560 ataggcactc agatttctca aattcttgat tatatacaat ctgggttagc ctggctctcc 1620 agtagttacg cttctattgc caacttcttt acgaaaggca aggtttatat tatggagtgt 1680 ttagaacttg ttaaagccaa attgccttcg tatcttttct ccgcagaagt tggtaggtac 1740 atattgctac ttttaggagt ttttctttgt ttgggattag ttaatagtct tatttacagt 1800 gtggcgcctc aatatagtct ctcttttggg acggtatgta agatatctct tggcgctttg 1860 gcactagttg gtttgggcga cttagtcgcc tatttgttta atagtccggg agcgaaactc 1920 cgcgcatttg taaatattgt gtgcaatatg tgcggttgta aaaatttctt tgctccctct 1980 agtgatggcg aagaacggtc gggcttttct gttctctcaa tgatgggagc catctgtgct 2040 ctgcaatctt tactaccggc caacgtgtcc cgcttttcat gggactgtgg aaaatgggcc 2100 cagactttca aaactgggtt cgactgccat gaaaagttcg caactgtgtg cgaatctttg 2160 tccgtctggc ttctttcgaa agttggttta ttcaaatcat ctgagagcca ggctatgcaa 2220 accatcctac tctcctccgg cattaacact tgcggatggt tggaaaaagt tgcagctttt 2280 cactctgacg tgcattcctc tcaaatttgt attccagatc ttttattgag agcacgtcag 2340 cttattgaaa cgggcgatac tattagtgac ttgttatcta attcgaccgt ttcgttgagc 2400 tttctcttgc gtgagcgaat taagctagcg cttagggaat tgaaggagga tcacacgcaa 2460 ttgcaattag cagttgacgt gtctgtttct tctgaatgtc ctttcgtgct cttctttgca 2520 ggagactctg gtgttgggaa atccactgcg atgaaaaagt tcagggagga agtccttgat 2580 aaattgggat atcccaagac cgcacgtttc taccccagaa atcctgggga aaaattctgg 2640 tccggttatt tgcgtcatac ggcagtgata tatgatgatt tcgcgcaaat accgcagggt 2700 gacatgacat atgatgaagc tgaacttatc agaattgtca ccaatgctgt agtcacagtt 2760 cctatggcta tagctgaaga gaaggggcga actttcagat ccaagttcgt ttttgcctgc 2820 accaacaggt attgcgaaag cgaagatgcc ccgctcgccg acgaaatggc tttcagacga 2880 cgccgacatc tctatataca tgtcgcccgg aagccaggag tggaaccagg ccccagagga 2940 gtggacaatc tcgagttcag tgaaatggac aatcgggact ccaatggaga gcctgcctac 3000 caacttaatg atcagggtaa gcgagtattg ataaatcaaa agcttaccta tgatcagttg 3060 ctacagctgt atttcgagcg atatcaagcc tttaaagtgc ttgaaggaca attagaaggc 3120 agcgtagcac gagcaccgtc ctcgagcaat tatgagggat gtgataattg gtggactttg 3180 gtggggtccg aggccaaatt cgaggcggtg tacttcaatg gcgaacctgt tagcgaggac 3240 gatcaattga cccaacttgg gaattataag actcgctatg acatattgcg cgcgcgcgtg 3300 atactggagt ccatcgatta tgcggattgt gatttcatta ttaaaaattt ttccgcgatg 3360 ggtgaaggta tttaccatgc agatcccgag gtgaatgcaa ctgggcaacg acattttagc 3420 gcgatgagcc cagttacgcg tagattgatc tgctcgtgcc tgaagacacg tagggaggat 3480 gagattaaaa gccactctct tctgagtaaa ttcaaatccc tcctaactgt gcccgttgat 3540 gcctggaaag cagcgccagc ttggtttaag tgcatttcgc tcctcttagt tgctggtgga 3600 gtgggatatg ctctttgtag agcaataagc ggcatcatcg gtatcttccg taaaggccct 3660 gcagcagcat cactagctct attcagtggt ggaattggag cagtgctgcg gggagattcg 3720 cctgacgacc ctcgtgaaga acgagataat cctgacgtaa ttgttacaaa gggtcgtgga 3780 aaggctatat gggctggagc tgaaatacca gaagctttgg aagccctgag gaagagccag 3840 gttgttttga tgggaactgg ccgcaaaggt gagccagtca tgtgttcagc tcttcctata 3900 acatcacact ctgtcttatg taccacccat gagatagaag cttttgatcc caatcagaac 3960 atgagcttga ttgtcaataa ctctatttat agttttgttc tgattccggg agccataatg 4020 tacaagcgat atgatcaacc taacttggtt gacaaggtgc acgaacttgt acgcgttgat 4080 ttgcccaaaa ataagggctt ctctttaaac gctcgtgcgc aattcagcga ggacttttat 4140 gacaatggca ccgccatgaa atgttgggtg gtgcctaaca agaaccccgc tgttgctgac 4200 attatgcgca aggtggattg cgagaagagt tcgcagatca tagatatatt tgcaagcgag 4260 ctctctcgtt ctagtggctg tgaacccgtc aggcaaactc agcgttttat ctatgccgac 4320 ggaccagccc taaatgggca ctgtgggcgc ctattgtgtg ccaatctggc tgggcactgg 4380 cgcgtcatag gaatgtgtgc gggagaaggg aagaatagag ctggagtcac caaggctctg 4440 tatgctgaca tcccgcacga atttttaaga gcggataacc tcaatgctgt tcaaagaggt 4500 gctgagcttg atgcggctat tcttgatagg ttttcaatac ctatcagtga atgtcgtaaa 4560 gaactcacgc caatgacgac cagattaggt tatgttgtag gtcaatatcc gcgggctctg 4620 cgtaaaactt caatagttcc ttctatcatt cacgataatt tgtggaggaa accagagact 4680 gagcccacaa tattgggaaa gatagatgat cgctcgcctt tcccttatga tccctatgcc 4740 acaattggcg agaaatttgt gcaagaagtt ggcccgatag atttatccgt cggatcagat 4800 gctagtctcg ttgtggcaaa catagggtct tcttggaaag ctgttgggaa accacaatgt 4860 cccactgtcc ttacttggga agtggctatt aatggagatg cagctattcc atattgtgag 4920 cggctccccc tctcgacgtc cgaaggttac cctgactcta ttcagagaaa ttttggggaa 4980 aaaggaaaga aaagattttt tgatcttaag ggggagaatg tgcgagttcc tactcccgcg 5040 ctgatggaag aactagaagt tctcgagcgg gaactccaga aggaggaggt ttgtctcact 5100 tgcattaaca ctgcatgtgc taaggatgag aagacagccc cgaagaaggt tcgggttcaa 5160 ccgaaaaccc gaatttttga gatactcccg tttcaaatta atatcattat tcggagatat 5220 ctcatgttct ggatgcaact attgatggtt gcacacgatg agctgcccag taaagtcgga 5280 attaatgttt attctgagag ttgggataga ctgctgggta gacataccag attagccaac 5340 cactttaccg gtgactattc tggttttgat acttcaaccc cccgcgttct cgtctatgct 5400 ataatcgata aaataaatga attagctgac gacggggagg ttaaccaacg cacgagaaga 5460 aatatcatca gatttgtttt gaacaggtat cttatatctg atggtgttct ttatgagatt 5520 catggtggaa ccccctccgg cttcgctcca acagttatga taaattcggt tgtcaacgaa 5580 ttttatctta agtggagttg gatcgggtta ttgaaggaag ccgggtatgc taaccaagct 5640 accctctatg cttttcatga agccactgag atatcgcttt atggtgatga caacttcgtc 5700 tcagtggcca ctccagtggc ttccgtatac aatctcacga caatctctaa tttcctaggg 5760 aggattgggg ttaaattagg tgatggcgcc aaaacgggta ctataaaacc ttttatcccc 5820 cttgaagagg tggatttttt gaagaggcaa tttgttgcag actctggatc cactgcaatt 5880 ctttgtcctc tgaagaaaat ctctattgag gagagattgt tctatgtcag aggcgggcag 5940 gatgagattg ctgccctcga gcttaatata gctactgctc tatgtgaggc tttctttcat 6000 ggtaaggagt atttttcctt tctagagggg aaaattatag aagccatgcg caagagcggc 6060 gtagctctca gtagacctct gcccaccatg gaatctgtgc gagcgtggta tatgtcccag 6120 cgaggaaata caaagatccg ctcgccttct ttcgaaggcc tcggtactat gtcaggtatt 6180 ttaaatattg gattagccga ggctcgtagc gttggtggag ttgcttgctt ctccggaata 6240 gagtttcgag gtagaagtga tgatcacctt atggtgatcc cgacttacat tccgggaggc 6300 tggcgcacta agcaacagca gacgtatatt agttttgtgc gtgatagcga gaagatggct 6360 caagtaataa agcgcgtcgc ccacttctca actgttgttg ctactgataa gtctatggcg 6420 tatctggttg ctatttgcat tgcttacagc agaggatcaa tctccagaat ggaggttaga 6480 tgccacgttc agaatctcaa agtggcggag atgttgttat gcaaccagat atgtaatttc 6540 ctgtagagga aattttaggt gatgcccacc ggaccttaac gtggggttta tggcttctct 6600 ctgcggcctg atgcagagtt gtacatttat aactagtgtg tttatttttg tgtgtttgtt 6660 ttgtttgttt tgatataaaa taaactgaag tttgcaaaaa gggtttctcg gagttcttcc 6720 ctttccgact caggagcttg gcgtgttttt cttgatttct gtcgccggtt tcaatcagtg 6780 aaagtctgat ggcc 6794 //