ID   AB006813; SV 1; linear; genomic RNA; STD; VRL; 2200 BP.
XX
AC   AB006813;
XX
DT   10-SEP-1997 (Rel. 52, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Cucumber mosaic virus genomic RNA for 3a protein, coat protein, complete
DE   cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2200
RA   Takanami Y.;
RT   ;
RL   Submitted (25-AUG-1997) to the INSDC.
RL   Yoichi Takanami, Kyushu University, Laboratory of Plant Pathology, Faculty
RL   of Agriculture; Higashi-ku, Hakozaki, 6-10-1, Fukuoka 812-81, Japan
RL   (E-mail:takanami@agr.kyushu-u.ac.jp, Tel:+81-92-642-2835,
RL   Fax:+81-92-642-2835)
XX
RN   [2]
RA   Takanami Y., Shigemi T., Kikuhara K., Uchiba T., Takeshita M.;
RT   "Specific detection of subgroup I and II of cucumber mosaic virus with
RT   Northern hybridization using digoxigenin-labeled oligo-DNA probes";
RL   Unpublished.
XX
DR   MD5; 59bd41f0ca5b487ee5678f80b9f78f68.
DR   EuropePMC; PMC112760; 10400773.
DR   EuropePMC; PMC4908998; 27366772.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2200
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="m2"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             98..937
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:O36186"
FT                   /protein_id="BAA22167.1"
FT                   /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGGKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEFLNESPPFAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1223..1879
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:O36187"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:O36187"
FT                   /protein_id="BAA22168.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNKT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2200 BP; 496 A; 518 C; 524 G; 662 T; 0 other;
     gtaatcttac cactttcttt ttcacgtcgc gtcgcgtcag tccacgctgt gtgtgtgtgt        60
     gtgttagtta gtgtgtcgtg tttagattac ggaggttatg gctttccaag gtaccagtag       120
     gacgttaact caacagtcct cggcggcgtc gtctgacgac ttacagaaga tattattcag       180
     ccccgatgcc atcaagaaga tggctactga gtgtgaccta ggtcgacatc attggatgcg       240
     cgcggataac gccatctctg tcagacctct cgttccccaa gtaaccagta acaatttatt       300
     gtctttcttt aaatctgggt atgatgccgg tgaattgcgc tctaaaggct atatgagcgt       360
     tcctcaagtg ctgtgtgccg ttaccaggac ggtttccacg gatgctgagg gttctttgaa       420
     aatttatttg gctgacctag gtggtaaaga attatcccca attgatgggc agtgtgttac       480
     tttacataat catgagctcc ctgctttgat atctttccaa cctacctacg attgccccat       540
     ggaattagtt ggcaatcggc atcgatgttt cgcggtagtc gttgagagac atggttatat       600
     tggttacggt ggtaccactg ctagcgtgtg tagtaactgg caagctcagt tttcttcaaa       660
     gaataataat tacacacacg ccgctgctgg taagactctt gtgttgcctt acaacagatt       720
     agctgagcat tcgaaaccgt cagccgtcgc tcgcctgttg aagtcgcagt taaacaacgt       780
     tagctcatcg cgctatcttt tgccgaacgt tgctcttaat caaaatgcgt ctgggcacga       840
     gtccgagttt ttaaacgaaa gccctccctt cgctataggg agtccgtccg cgtcccgtaa       900
     caatagcttc agatcgcagg tggttaacgg tctttagtgt tttgttacgt tgtacccatg       960
     tatatatata ctacgtttat cttccgtatg taaatacatg tgagtctaga gtcccgtgtg      1020
     agttgtaacg gtagacatct gtgacgcgaa gccgcttgaa gatttcccat ctggggttag      1080
     taagtccaca tcacagtttt aaggttcaat tccttttact ccctgttggg ccccttactt      1140
     tctcatggat gcttctccgc gagatagcgt ttagttgttc acctgagtcg tgtgtttctt      1200
     tgttttgcgt cttagtgtgc ctatggacaa atctggatct cccaatgcta gtagaacctc      1260
     ccggcgtcgt cgcccgcgta gaggttctcg gtccgcttct ggtgcggatg ctgggttgcg      1320
     tgctttgact cagcagatgc tgaaactcaa taaaaccctc gccattggtc gtcccactct      1380
     taaccaccca accttcgtgg gtagtgaaag ctgtaaaccc ggttacactt tcacatctat      1440
     taccctgaaa ccgcctgaaa ttgagaaagg ttcatatttt ggtagaaggt tgtctttgcc      1500
     agattcagtc acggactatg ataagaagct tgtttcgcgc attcaaatca ggattaatcc      1560
     tttgccgaaa tttgattcta ccgtgtgggt tacagttcgg aaagtacctt catcatccga      1620
     tctttccgtc gccgccatct ctgctatgtt tggcgatggt aattcaccgg ttttggttta      1680
     tcagtatgct gcgtccggag ttcaggccaa caataagtta ctttatgacc tgtccgagat      1740
     gcgtgctgat atcggcgaca tgcgtaagta cgccgtcctg gtttactcga aagacgataa      1800
     actagagaag gacgagattg tacttcatgt cgacgtcgag catcaacgaa ttcctatctc      1860
     acggatgctc ccgacttagt ccgtgtgttt accggcgtcc gaagacgtta aactacactc      1920
     tcaatcgcga gtgctgagtt ggtagtattg ctccaaactg cctgaagtcc ctaaacgtgt      1980
     tgttgcgcgg ggaacgggtt gtccatccag cttacggcta aaatggtcag tcgtgtcttt      2040
     cacacgccga tgtcttacaa gatgtcgagg tacccttgaa atcatctcct agatttcttc      2100
     ggaagggctt cgtgagaagc tcgtgcacgg taatacactg atattaccaa gagtgcgggt      2160
     atcgcctgtg gttttccaca ggttctccaa aaggagacca                            2200
//