ID   AB004805; SV 1; linear; genomic RNA; STD; VRL; 1441 BP.
XX
AC   AB004805;
XX
DT   23-APR-1998 (Rel. 55, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Garlic common latent virus CP, NABP genes for coat protein, nucleic acid
DE   binding protein, complete cds, clone: GHAV.
XX
KW   .
XX
OS   Garlic common latent virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1441
RA   Sumi S.;
RT   ;
RL   Submitted (12-JUN-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050358.
RX   PUBMED; 9687867.
RA   Tsuneyoshi T., Matsumi T., Deng T., Sako I., Sumi S.;
RT   "Differentiation of Allium carlaviruses isolated from different parts of
RT   the world based on the viral coat protein sequence";
RL   Arch. Virol. 143(6):1093-1107(1998).
XX
DR   MD5; 5b0b516af34f92301d24749eff56c731.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1441
FT                   /organism="Garlic common latent virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="garlic"
FT                   /clone="GHAV"
FT                   /db_xref="taxon:47900"
FT   CDS             27..986
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O70733"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:O70733"
FT                   /protein_id="BAA25782.1"
FT                   /translation="MSTSETEEQRSRRQASERSEVTRRKNDAAVRARQDAAIDSEEPAD
FT                   VHDTSVNDVDLRQMENRVQEAKRFLERFNKLKKFQADNMTAGEIKNGGFETGRPKLNIA
FT                   ANLRGDTANVFTRPSMDALIALDFKAESLAVATAEDLAAITAKFEQLGVPTERLAPLCW
FT                   SVARYCADTSSSYVADPKGTFEYPGGAITRDAVYAVIKEVTTLRAFCRAFAPVVWNEML
FT                   IAKRPPAGWQAKGYTTSTKYAAFDTFDYVLNSACVQPLEGIIRVPTDEETIAHMTNKRI
FT                   AIDRNRRNGRFSSTNSLVTGGMFGKDIKTNFNGSNNAD"
FT   CDS             964..1428
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NABP"
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:O70734"
FT                   /protein_id="BAA25783.1"
FT                   /translation="MDPTMQISVSLLLVVKNKLCDSGVPTDVAIGIIEPIIKEVRKLQR
FT                   QEEQRLLRFNGCSRSAIKRRAKYLNKCHKCGKQSHYGLCSRNQTISNMEVEFLIRCGTI
FT                   RYLTENPQRRKDSIYSSDYEKLVERLRVYSSVSEPYWRLFRPILNSLTKV"
XX
SQ   Sequence 1441 BP; 430 A; 266 C; 365 G; 380 T; 0 other;
     tttcaagctt ttggattgaa ataattatgt caacgagtga aacagaggag cagagatcgc        60
     gaagacaggc ctcagagaga agcgaagtga cacgccggaa aaatgacgca gcagtgagag       120
     ctaggcaaga tgctgctatc gattctgagg aacctgcgga tgtgcatgac acgagcgtta       180
     atgatgttga tctgcgtcaa atggaaaata gagtccagga agctaagcgg tttttggagc       240
     gctttaacaa gcttaagaag ttccaggcag acaatatgac agcaggtgag atcaagaatg       300
     gagggtttga aactgggagg ccaaaactga atattgcggc caatttgcgc ggcgacactg       360
     ctaatgtatt cactaggcct agcatggatg ctttaatagc attggatttc aaagctgaat       420
     ccttggcagt cgcaactgct gaagacctag ctgctatcac tgctaaattt gagcagcttg       480
     gggtgccaac tgagagatta gctccacttt gttggtcggt tgcaaggtac tgcgcagata       540
     caagttcttc atatgtagct gatccaaaag gaacttttga atacccaggg ggtgctataa       600
     caagggacgc tgtttatgct gtcatcaaag aagtcacgac cctgagggct ttctgcagag       660
     ctttcgcacc agtggtttgg aatgaaatgt taatcgctaa aagaccccct gctggttggc       720
     aagccaaagg ttacaccact agtacaaagt atgctgcctt tgatactttc gattacgtgc       780
     ttaattctgc ttgtgtccag ccactcgagg ggatcatacg ggttccaacc gatgaggaga       840
     ccatagctca catgacaaac aagcggattg ctattgatag gaataggcgc aatggccgat       900
     tttcgagcac aaatagttta gttactgggg gcatgttcgg taaagatatc aaaacaaact       960
     tcaatggatc caacaatgca gattagtgta agtttactct tggtcgtaaa gaataaattg      1020
     tgtgatagtg gcgtgcctac tgacgtcgcg attggtatta tagaaccaat tattaaagag      1080
     gtgaggaaat tgcagcgcca agaagagcaa aggctgctac gttttaatgg ttgttctagg      1140
     agtgctatta aaagacgagc taagtatctc aataaatgtc ataaatgcgg taaacaaagt      1200
     cactacgggc tttgttcgcg taatcagact atcagtaaca tggaggtgga gtttctcatc      1260
     cgttgtggga cgattaggta tcttaccgaa aatccacaaa gacggaagga ttccatttac      1320
     agttctgatt atgaaaaatt agtagagcgt ctacgcgtgt atagtagtgt gtcagagcca      1380
     tattggcgac tattcagacc tattttgaat agcttgacta aggtttaata tatttccttt      1440
     t                                                                      1441
//