ID   AB004804; SV 1; linear; genomic RNA; STD; VRL; 1441 BP.
XX
AC   AB004804;
XX
DT   23-APR-1998 (Rel. 55, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Garlic common latent virus CP, NABP genes for coat protein, nucleic acid
DE   binding protein, complete cds, clone: GAMS.
XX
KW   .
XX
OS   Garlic common latent virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1441
RA   Sumi S.;
RT   ;
RL   Submitted (12-JUN-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050358.
RX   PUBMED; 9687867.
RA   Tsuneyoshi T., Matsumi T., Deng T., Sako I., Sumi S.;
RT   "Differentiation of Allium carlaviruses isolated from different parts of
RT   the world based on the viral coat protein sequence";
RL   Arch. Virol. 143(6):1093-1107(1998).
XX
DR   MD5; be7e33ce975ee038afed8cd45e89a942.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1441
FT                   /organism="Garlic common latent virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="garlic"
FT                   /clone="GAMS"
FT                   /db_xref="taxon:47900"
FT   CDS             27..986
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O70731"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:O70731"
FT                   /protein_id="BAA25780.1"
FT                   /translation="MSTSETEEQRSRRQASERSEVTRRKNDAAVRARQDAAIDSEAPVD
FT                   VQETSVNDVDLRQMENRVQEAKRVLERFNKLKKFQADNMTAGEIKNGGFETGRPKLNIA
FT                   ANLRGDTANVFTRPSMDALIALDFKAESLAVATAEDLAAITAKFEQLGVPTERLAPLCW
FT                   SIARYCADTSSSYVADPKGTFEYPGGAITRDAVYAVIKEVTTLRAFCRAFAPVVWNEML
FT                   IAKRPPAGWQTKGYTASTKFAAFDTFDYVLNSACVQPLEGIIRVPTDEETIAHMTNKRI
FT                   AIDRNRRNGRFSSTNSLVTGGMFGKDIKTNFNGSNNAD"
FT   CDS             964..1428
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="NABP"
FT                   /product="nucleic acid binding protein"
FT                   /db_xref="InterPro:IPR008891"
FT                   /db_xref="UniProtKB/TrEMBL:O70732"
FT                   /protein_id="BAA25781.1"
FT                   /translation="MDPTMQTSVSLLLAVKNKLCDSGVPTDVAIGIIEPIIKEVRKLQR
FT                   REEQRLLRFNGCSRSAIKRRAKYLNKCHKCGKQSHYGLCSRNQTISNMEVEHLIRCGTF
FT                   RYLTENPQRRKDSIYSSDYEKLVERLRVYSSVSGPYWRLFRPILNSLTKV"
XX
SQ   Sequence 1441 BP; 416 A; 266 C; 376 G; 383 T; 0 other;
     tttcaagctt ttggattgaa ataattatgt caacaagtga aacagaggaa cagagatcgc        60
     gaagacaggc ttcagagaga agcgaagtga cacgccggaa aaatgatgca gcagtgagag       120
     ctaggcagga tgctgctatc gattctgagg cgcctgtaga tgtgcaagag acgagtgtta       180
     atgatgttga tctgcgtcaa atggagaatc gggtccagga agctaagcgg gttttggagc       240
     gctttaacaa gcttaagaag ttccaggcgg acaatatgac tgcaggtgag atcaagaatg       300
     gagggtttga gactgggagg ccaaaactga acattgcggc caatttgcgc ggcgacacag       360
     ctaatgtatt cactaggcct agcatggatg ctttaatagc attggatttc aaggctgaat       420
     cattggcagt tgcgactgct gaagaccttg ctgccatcac tgctaaattt gagcagctcg       480
     gggtgccaac tgagagatta gctccccttt gttggtcgat tgcaaggtat tgcgcagata       540
     caagttcttc atatgtggct gatcctaaag gaacttttga atacccaggg ggtgctataa       600
     caagggatgc tgtttatgct gtcatcaaag aagtcacgac cctgagggct ttctgtagag       660
     ctttcgcacc agtggtttgg aatgaaatgt taattgctaa aagaccacct gctggttggc       720
     aaaccaaagg ttacaccgct agtacaaagt ttgctgcctt tgatactttc gattacgtgc       780
     ttaattctgc ttgtgtccag ccacttgagg ggatcatacg ggttccaacc gatgaggaga       840
     ccatagctca catgaccaac aagcggattg ctattgatag gaataggcgt aatggccggt       900
     tttcaagcac taacagttta gttactgggg gcatgttcgg taaggatatc aaaacaaact       960
     tcaatggatc caacaatgca gactagtgta agtttactct tagccgttaa gaataaattg      1020
     tgtgatagtg gcgtgcctac tgacgtcgcg attggtatta tagaaccaat tatcaaagag      1080
     gtgaggaaat tgcagcgccg agaagagcaa aggctgctac gttttaatgg ttgttctagg      1140
     agtgctatta aaagacgagc taagtatctc aataaatgtc ataagtgcgg taaacaaagt      1200
     cactacgggc tttgttcgcg taatcagacc atcagtaaca tggaggtgga gcatctcatt      1260
     cgttgtggga cgtttaggta tcttaccgaa aatccacaaa gacggaagga ctccatctac      1320
     agttctgatt atgaaaaatt agtagagcgt ctacgcgtgt atagtagtgt gtcagggcca      1380
     tattggcgac tattcagacc tattttgaat agcttgacta aggtttaata tatttccttg      1440
     t                                                                      1441
//