ID   AB004781; SV 1; linear; genomic RNA; STD; VRL; 2218 BP.
XX
AC   AB004781;
XX
DT   29-JUN-1998 (Rel. 56, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 3)
XX
DE   Cucumber mosaic virus genes for 3a protein and coat protein, complete cds,
DE   strain D8.
XX
KW   3a protein.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2218
RA   Takanami Y.;
RT   ;
RL   Submitted (09-JUN-1997) to the INSDC.
RL   Yoichi Takanami, Kyushu University, Laboratory of Plant Pathology, Faculty
RL   of Agriculture; Higashi-ku, Hakozaki, 6-10-1, Fukuoka 812-81, Japan
RL   (E-mail:takanami@agr.kyushu-u.ac.jp, Tel:+81-92-642-2835,
RL   Fax:+81-92-642-2835)
XX
RN   [2]
RA   Takeshita M., Takanami Y.;
RT   "Complete nucleotide sequences of RNA3s of cucumber mosaic virus KM and D8
RT   strains";
RL   J. Fac. Agric. Kyushu Univ. 42:27-32(1997).
XX
DR   MD5; 794de3fb0f6832c4ede81540ede3be92.
DR   EuropePMC; PMC110906; 11044076.
DR   EuropePMC; PMC112760; 10400773.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2218
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="3"
FT                   /strain="D8"
FT                   /isolate="Japanese radish"
FT                   /mol_type="genomic RNA"
FT                   /clone="pCD3"
FT                   /db_xref="taxon:12305"
FT   CDS             121..960
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q787R1"
FT                   /protein_id="BAA31135.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADSAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNAKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1260..1916
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YJS3"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YJS3"
FT                   /protein_id="BAA31136.1"
FT                   /translation="MDKSESTSAGRNRRRRPRAGSRSASSSSDANFRVLSQQLSRLNKT
FT                   LAAGRPTLNHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 2218 BP; 517 A; 527 C; 529 G; 645 T; 0 other;
     gtaatctaac cacctgtgtg tgtgtgtgtg tgtatcgagt cgtgttgtcc gcacatttga        60
     gtcgtgttgt ccgcacatat atttttattt ctttgtacag tgtgttagat ttcccgaggc       120
     atggctttcc aaggtaccag taggacttta actcaacagt cctcagcggc tacgtctgac       180
     gatcttcaaa agatattatt tagccctgaa gccattaaga aaatggctac tgagtgtgac       240
     ctaggccggc atcactggat gcgcgctgat agtgctattt cagtccggcc cctcgttccc       300
     gaagtaaccc acggtcgtat tgcttccttc tttaagtctg gatatgatgt tggtgaattg       360
     tgctcaaaag gatacatgag cgtcccccaa gtattatgtg ctgttactcg aacagtttct       420
     actgatgctg aagggtctct gagaatttac ctggctgatc taggcgacaa ggagttatct       480
     cccatagatg ggcaatgcgt ttcgttacat aaccatgatc ttcccgcttt ggtgtctttc       540
     caaccgacgt atgattgtcc tatggaaaca gttgggaatc gtaagcggtg ttttgctgtt       600
     gttatcgaaa gacatggtta cattgggtat accggcacca cagctagcgt gtgtagtaat       660
     tggcaagcaa ggttttcatc taagaataac aactacactc atatcgcagc tgggaagact       720
     ctagtactgc ctttcaacag attagctgag caaacaaaac cgtcagctgt cgctcgcctg       780
     ttgaagtcgc aattgaacaa cattgaatct tcgcaatatc tgttaacgaa cgcgaagatt       840
     aatcaaaatg cgcgcagtga gtccgaggaa ttaaatgttg agagccctcc cgccgcaatc       900
     gggagttctt ccgcgtcccg ctccgaagcc ttcagaccgc aggtggttaa cggtctttag       960
     cactttggtg cgtattagta tataagtatt tgtgagtctg tacataatac tatatctata      1020
     gtgtcctgtg tgagttgata cagtagacat ctgtgacgcg atgccgtgtt gagaagggaa      1080
     cacatctggt tttagtaagc ctacatcaca gttttgaggt tcaattcctc ttactccctg      1140
     ttgagcccct tactttctca tggatgcttc tccgcgagat tgcgttattg tctactgact      1200
     atatagagag tgtgtttgtg ctgtgttttc tcttttgtgt cgtagaattg agtcgagtca      1260
     tggacaaatc tgaatcaacc agtgctggtc gtaaccgtcg acgtcgtccg cgtgctggtt      1320
     cccgctccgc ctcctcctcc tcggatgcta actttagagt cttgtcgcag cagctttcgc      1380
     gacttaataa gacgttagca gctggtcgtc caacccttaa ccacccaacc tttgtaggga      1440
     gtgaacgctg taagcctggg tacacgttca catctattac cctaaagcca ccaaaaatag      1500
     accgtgggtc ttattatggt aaaaggttgt tactacctga ttcagtcacg gagtatgata      1560
     agaagcttgt ttcgcgcatt caaattcgag ttaatccttt gccgaaattt gattctaccg      1620
     tgtgggtgac agtccgtaaa gttcctgcct cctcggactt atccgttgcc gccatctctg      1680
     ctatgttcgc ggacggagcc tcaccggtac tggtttatca gtatgctgca tctggagtcc      1740
     aagctaacaa caaattgttg tatgatcttt cggcgatgcg cgctgatata ggtgacatga      1800
     gaaagtacgc cgtcctcgtg tattcaaaag acgatgcgct cgagacggac gagctagtac      1860
     ttcatgttga catcgagcac caacgcattc ccacgtctgg ggtgctccca gtctgattcc      1920
     gtgttcccag aaccctccct ccagttttct gaggcgggag ctgagttggc agttctgcta      1980
     caaactgtct gaagtcacta aacgctctgc ggtgaacggg ttgtccatcc agcttacggc      2040
     taaaatggtc agtcgtggag aaatccacgc cagtagactt acaagtctct gaggcgcctt      2100
     tgaaaccatc tcctaggttt cttcggaagg acttcggtcc gtgtacttct agcacaagat      2160
     gctagtttca gggtacgggt gccctcccac ctttgtggga gcctccaaaa ggagacca        2218
//