ID   AB003308; SV 1; linear; genomic RNA; STD; VRL; 1819 BP.
XX
AC   AB003308;
XX
DT   27-OCT-1997 (Rel. 53, Created)
DT   07-JUL-2003 (Rel. 76, Last updated, Version 2)
XX
DE   Clover yellow vein virus genomic RNA for polyprotein, partial cds,
DE   isolate:NFU.
XX
KW   coat protein; PIb; polyprotein.
XX
OS   Clover yellow vein virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1819
RA   Natsuaki T.;
RT   ;
RL   Submitted (22-APR-1997) to the INSDC.
RL   Tomohide Natsuaki, Utsunomiya University, Faculty of Agriculture;
RL   Mine-machi 350, Utsunomiya, Tochigi 321, Japan
RL   (E-mail:natsuaki@cc.utsunomiya-u.ac.jp, Tel:+81-28-649-5449,
RL   Fax:+81-28-649-5401)
XX
RN   [2]
RA   Sasaya T., Kaji K., Fujisawa I., Koganezawa H., Teraoka T., Natsuaki T.,
RA   Okuda S.;
RT   "Characterization and nucleotide sequence of the 3' terminal region of
RT   clover yellow vein virus isolated from Gentian (Gentiana spp.)";
RL   Nippon Shokubutsu Byori Gakkaiho 63:328-333(1997).
XX
DR   MD5; 53dc5510da57f34ac019d840630b8faf.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1819
FT                   /organism="Clover yellow vein virus"
FT                   /isolate="NFU"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12198"
FT   CDS             <1..1644
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O36182"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:O36182"
FT                   /protein_id="BAA22885.1"
FT                   /translation="VYCEGDGQQFDSSLTPYLINSVLRLRLNFMEEWDIGEEMLKNLYT
FT                   EIIYTPILTPDGTIIKKFKGNNSGQPSTVVDNTLMVIMAMYYAAEKLGVEGDLSESIVF
FT                   YANGDDLLIAVHPSHEWYLDQLSTLFKELGLNYDFSSRTKNKGDLWFMSHCGIKKEGLW
FT                   IPKLEPERVVSILEWDRAAEPEHRLEAICASMIEAWGYDDLLNHIRRFYLWVLDQAPYK
FT                   QLSAEGKAPYISEVALKSLYTGKPATSCELEVYNKIHQEQHDEFDDSQMKFVFQSDKDK
FT                   LNAGEQQKSKDKESRQRDQESENSNRQIIPDRDINAGTTGTFSVPKLKKISGKLSLPKI
FT                   KGKGLLNLDHLLVYVPNQDDISNNIATQEQLEAWHEGVKNAYEVDDQQMEIICNGLMVW
FT                   CIENGTSGDLQGEWTMMDGEKQVTFPLKPILDFAKPTLRQIMAHFSQAAESYIEFRNST
FT                   ERYMPRYGLQRNLTDYGLARYAFDFYRLTSKTPARAREAHMQMKAAAIRGKSNHMFGLD
FT                   GNVGTDEENTERHTANDVNRNMHHIAGARF"
FT   mat_peptide     <1..828
FT                   /product="NIb"
FT   mat_peptide     829..1641
FT                   /product="coat protein"
FT   repeat_region   1702..1719
FT                   /rpt_type=DIRECT
FT   repeat_region   1774..1791
FT                   /rpt_type=DIRECT
XX
SQ   Sequence 1819 BP; 607 A; 329 C; 425 G; 458 T; 0 other;
     gtgtattgtg aaggcgatgg gcagcagttt gatagttctc taacaccata cctgataaat        60
     tctgttctga gacttcgact gaacttcatg gaagagtggg acattggtga ggaaatgctt       120
     aagaacttgt acacagagat catatataca ccaatcctga cacctgatgg tacaataatt       180
     aagaagttca aaggaaacaa cagtggacaa ccctcgacag ttgtcgataa cacattgatg       240
     gtgataatgg ctatgtacta tgcagcagaa aaacttggtg tggaaggaga tttaagcgag       300
     tccattgtgt tctacgccaa tggtgatgat ttgttaatag cagtgcaccc aagtcatgag       360
     tggtatctag accaactttc tacacttttc aaagagttgg gcttgaacta tgatttctca       420
     agcaggacaa agaataaagg tgatctctgg ttcatgtcac actgtggtat aaagaaagaa       480
     ggtttgtgga ttcccaagtt ggagccagaa agagtagtct caatccttga atgggataga       540
     gcggcagagc ctgaacatag gttggaagct atttgtgcat ccatgatcga agcttggggt       600
     tatgatgact tgctcaatca catacgcagg ttttatttat gggttcttga ccaagcacca       660
     tacaaacagc tcagcgcaga aggaaaagca ccctatatct cagaagttgc gttgaagagt       720
     ttgtacactg ggaaaccagc tacaagttgt gaactagaag tgtacaataa gatccatcaa       780
     gagcagcacg atgagtttga tgacagccag atgaagtttg ttttccaatc cgacaaagat       840
     aagttgaatg ctggtgagca acaaaagtca aaggataagg aatcaagaca gagagatcag       900
     gagagtgaaa attcaaacag acaaatcatt ccagacagag acatcaatgc aggaaccact       960
     gggacttttt cggtacccaa attgaagaaa atatcaggaa agctttcatt gcccaaaatc      1020
     aaaggaaaag gactgctaaa tctggaccat ttgttagttt atgttccaaa ccaagatgac      1080
     atctctaaca acatagcaac ccaagagcag ctggaagcgt ggcatgaagg agtcaagaat      1140
     gcgtatgagg tagatgatca gcaaatggaa atcatatgca atggattgat ggtgtggtgc      1200
     atagagaatg gcacgtcagg tgatcttcaa ggtgagtgga caatgatgga tggagagaaa      1260
     caggtaacat tcccactcaa gccaattctt gactttgcca aaccaacatt gaggcaaatt      1320
     atggcccact tttcccaggc agctgaatca tacatagagt tcaggaactc aacagagaga      1380
     tatatgccta ggtatgggct gcagagaaat ctcacagatt atggattggc cagatatgca      1440
     tttgacttct acaggttgac ctcaaagaca ccagcaagag ctcgagaagc acatatgcaa      1500
     atgaaagcag cagcaataag aggaaagtca aaccacatgt ttggactgga tggcaatgtt      1560
     ggaacagacg aggagaacac agaaaggcac acagcaaatg atgttaacag gaacatgcat      1620
     cacattgctg gagcacgatt ctagagtatc cgtctttaaa ttctccgtta atttcgaagt      1680
     tttactatta tagcactatg ttaagtgagg ttttacctcc atttcatttt aagtataata      1740
     tgtaatccat tctctctatt ctgacagagt agctaagtga ggttatacct cgttgtgaat      1800
     ctgatcttta tagagcgag                                                   1819
//