ID AB001580; SV 1; linear; genomic RNA; STD; VRL; 3511 BP. XX AC AB001580; XX DT 07-JAN-1998 (Rel. 54, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Rice dwarf virus genomic RNA, segment S2 of a transmission-defective DE mutant, complete sequence. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3511 RA Omura T.; RT ; RL Submitted (05-MAR-1997) to the INSDC. RL Toshihiro Omura, National Agricultural Research Center, Laboratory of RL Virology; Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan RL (E-mail:toomura@affrc.go.jp, Tel:81-29-838-8932, Fax:81-29-838-8929) XX RN [2] RX PUBMED; 9311898. RA Tomaru M., Maruyama W., Kikuchi A., Yan J., Zhu Y., Suzuki N., Isogai M., RA Oguma Y., Kimura I., Omura T.; RT "The loss of outer capsid protein P2 results in nontransmissibility by the RT insect vector of rice dwarf phytoreovirus"; RL J. Virol. 71(10):8019-8023(1997). XX DR MD5; b03fd8c21f76acfe9ee8881afbefb979. XX FH Key Location/Qualifiers FH FT source 1..3511 FT /organism="Rice dwarf virus" FT /segment="S2" FT /strain="O" FT /mol_type="genomic RNA" FT /note="transmission-defective (TD) isolate" FT /db_xref="taxon:10991" FT misc_feature 15..3461 FT /note="corresponding region to P2 outer capsid protein" FT variation 47 FT /replace="g" FT /note="termination codon is generated in the coding frame" XX SQ Sequence 3511 BP; 968 A; 727 C; 817 G; 999 T; 0 other; ggcaaaacct ggcgatggct tatcctaacg acgtcagaaa tgtttgagat gtgtacaacg 60 tgttccggga cgtgccaaac cgtgaacatt tgattcgaga tatccgcaat gggctggtta 120 cggtccggaa tctcacaaat atgcttacta atatggagcg cgatgatcaa ttgatcattg 180 ctcaactatc caatatgatg aaatcactat ctattggagt tgagaaggct caaaatgaac 240 ttagcaaatt gaagactacg gatgccgacc gtgccgcagt cttagcagct taccaaactt 300 cggtccttaa catagagcga aacactatgt tattgactgg gtacttcaag cagttagtct 360 tagacttaac tggctatgta ggtgccagtg tatatcctat cttacctttc atgattacgg 420 gggatcagtc tatgatggtt gattccgtta aggttaacat gaaaaatgta tttgatgata 480 agcatgagca ggagatagtc ctacctattc atcctgcttg ctttgtgtcg accatcactg 540 aggacacttc ttccgtagta tacgccgacg gagatgaact gtattcagtg cacgttaggc 600 acgcaaccat gactatgtat gtcaatgtgc ttggtgagac cgtcgagacc aggcagctgt 660 ctatgatagg cgaatccatc gttcctgatg atttcgcgcc ttccttgctg atattgagat 720 ttagtcaaga ttcagtcgga gaggttttct atcttagtca tgacaatatg aaaaagtttc 780 taggctacag ccttgaatat actgacaagt gcagtatatt cgacgtagcc agacgcgtat 840 ctacgacgcg taatacgata cctaatggat tctgctctgt tgatggcgtg ccgtaccttg 900 atggacggtt catttatcaa ccgagcggaa ttagtgcaga tagtaatatc tgtgctatat 960 acaattcata tgttttagac acgcttagat atattactga gtgtgaagtt gatacgttaa 1020 ggtcggtgtg cgatcaaact tcgtcaactg cattctcaaa gaccgatgtc ttgacatcga 1080 gtctgctaac catgcaaagt aacatttcag ctttatctgc cgctacccct caattagcga 1140 atgacgtaat cacattcgat tctaccgatc tactttctct cgggacagta ttgaccgtat 1200 cgaatgagtt tacagctgat gatacaatat taagcactag tcttgcaggt cactgccaag 1260 ttgattacag cgagggatcg cctcaagaca agagtatgag tatatctgta agctgcgatt 1320 cgtcgcagct tgcgtcatct actgtccatt cttactcagc tgacatactg gggcatggac 1380 tcaaaggtga ccgaactatg aacttaatga taaatgtacc tggacttatg aacccccaga 1440 aagtaacggt tgactatgtc tattcggatg gttacaaact gaactttgct tcagtggttg 1500 ccctcggcgc gcctttctgg attaacgcaa ctctgcagct tagtgtgtca ccttcggcac 1560 ataatatgct gagtaagtta acaccactgg ataatgatgc atgccctggg cttaaagcgc 1620 aggcaaacac gctcatactc gtatccatga ccatcaatct tgatgacgcc actcctgctt 1680 tgggagggga ggtgattcaa aaccgtgtgt tcaagataca ccacggcgat gatgtgtata 1740 gcttcgtcac cgactttgat gtcgttagtt atacctcaac gtccgggacc aattgtttga 1800 agcttatatc aagcgtggat atcaccagtc agcttccctc tgacatggtg atctacgtta 1860 tgaatgggtc gcccgatgct gcttttatat ctggtgattc cgttaatacg tcatcagtgg 1920 actggcacca gtccacaagc cagactgtgg ggaattatgt ctataccacg atgaaggctt 1980 attggaatgt aacgtcgtat gatgttgagg ctcgtcctta caccacgtac gtacctggaa 2040 aggttaactt tacagccgta gagcacgctg atgtttttgt agatgactac aacaccggcg 2100 ttaactcgta tgtgattgta aatagtagaa tatattataa gggaacccct ctatatattg 2160 aggtaccaag tggctcattc atcaaggtga gctacttcac aggccctttg aagaatccta 2220 ctgtggacac ttataacgct gaaatctctc gcaattcagc gtacctaatt aaagcaaatg 2280 cttcattaga ttcagtggcc acaatgctca ataatatatc gaatcgaatt gatgcaatgg 2340 aacgcttgat ggagcccaca cgtgcgcaga gaattgcagg agtagtctca agcataggtg 2400 gagtcatctc actcggtatg ccattgctcg gagcgatcgt ggtaaccatc ggtactatta 2460 tctccattgc tgacccagac aaacagggca ttgattacca ctcggtggct aatgccttta 2520 tgtcctggtg ccagtatgcg gcggtctgta ggtatgaata tggacttctg aagcgtggag 2580 atgagaaact agatgtgttg tcatttatgt cgaagcgtgt cgtgtcggat ttcaaaaata 2640 aacccgacgt tattagtctc ccagaattag gtgaatcagt actacgtgga tcaagcactg 2700 actatctaga cacggggatt aatatcattt ataatgatat gcaattgctt ggacaaggca 2760 aactctctgg ctggctcaac aaaactgtga gcaaggtgga gaataatgct gccaacttct 2820 ttgagaggaa tttggttaaa agtcttgcga ataaggaagt cctaccaatg catgctcgag 2880 ttgagattac tcaaaccgag aaaattggtg atgtgtatag gattacgatc ctatatacag 2940 ggataaatga aggatcatat ttgggtgggg atgtctttgc ttcgcggttg ggggacaaaa 3000 acatcttgcg tatgaatgga tttgaaagcg gaccaggaag gttcaaagct atcgtcgaat 3060 caactactga agtaggcaac tttcgtgtag ttgattggac ggtgtctgga atgtccaggt 3120 acgagattta tgctgctgcc ggtgaaatat atccgagcaa agacccctct catgctgatg 3180 tacagctgct atacgaaagc atagttcggg atctaaccac tcgggatggt agcttcgttc 3240 tgaagcatca tgatgtcctg cttctgcctg ggcaacttga cgcttttgag gagctaatca 3300 taagaaatgc ctcaaattac caatatgcgt ttattggttc aaactgtcaa aattatgcgc 3360 atgatgtggt cgacatcttg actaagttca agcgaccaca aaggtggatt aaagatgatg 3420 acttcaagtt gtacatccaa tctatctatg atgcattgtg atatgtacca gccagggctc 3480 agatgtatgc gtacttctga gttaaaatga t 3511 //