ID AB001579; SV 1; linear; genomic RNA; STD; VRL; 3511 BP. XX AC AB001579; XX DT 07-JAN-1998 (Rel. 54, Created) DT 30-MAR-2006 (Rel. 87, Last updated, Version 6) XX DE Rice dwarf virus genomic RNA, segment S2, complete sequence. XX KW . XX OS Rice dwarf virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Phytoreovirus. XX RN [1] RP 1-3511 RA Omura T.; RT ; RL Submitted (05-MAR-1997) to the INSDC. RL Toshihiro Omura, National Agricultural Research Center, Laboratory of RL Virology; Kannondai 3-1-1, Tsukuba, Ibaraki 305-8666, Japan RL (E-mail:toomura@affrc.go.jp, Tel:81-29-838-8932, Fax:81-29-838-8929) XX RN [2] RX PUBMED; 9311898. RA Tomaru M., Maruyama W., Kikuchi A., Yan J., Zhu Y., Suzuki N., Isogai M., RA Oguma Y., Kimura I., Omura T.; RT "The loss of outer capsid protein P2 results in nontransmissibility by the RT insect vector of rice dwarf phytoreovirus"; RL J. Virol. 71(10):8019-8023(1997). XX RN [3] RA Maruyama W., Ichimi K., Fukui Y., Yan J., Zhu Y., Kamiunten H., Omura T.; RT "The minor outer capsid protein P2 of rice gall dwarf virus has a primary RT structure conserved with, yet is chemically dissimilar to, rice dwarf virus RT P2, a protein associated with virus infectivity"; RL Arch. Virol. 142:1-9(1997). XX DR MD5; 614eddad75af5385c1d10fda8d30cda0. XX FH Key Location/Qualifiers FH FT source 1..3511 FT /organism="Rice dwarf virus" FT /segment="S2" FT /strain="O" FT /mol_type="genomic RNA" FT /db_xref="taxon:10991" FT CDS 15..3461 FT /codon_start=1 FT /product="127K minor outer capsid protein" FT /function="vector transmissibility" FT /db_xref="GOA:O55519" FT /db_xref="InterPro:IPR008580" FT /db_xref="UniProtKB/Swiss-Prot:O55519" FT /protein_id="BAA24138.1" FT /translation="MAYPNDVRNVWDVYNVFRDVPNREHLIRDIRNGLVTVRNLTNMLT FT NMERDDQLIIAQLSNMMKSLSIGVEKAQNELSKLKTTDADRAAVLAAYQTSVLNIERNT FT MLLTGYFKQLVLDLTGYVGASVYPILPFMITGDQSMMVDSVKVNMKNVFDDKHEQEIVL FT PIHPACFVSTITEDTSSVVYADGDELYSVHVRHATMTMYVNVLGETVETRQLSMIGESI FT VPDDFAPSLLILRFSQDSVGEVFYLSHGNMKKFLGYSLEYTDKCSIFDVARRVSTTRNT FT IPNGFCSVDGVPYLDGRFIYQPSGVSADSNICAIYNSYVLDTLRYITECEVDTLRSVYD FT QTSSTSFSKTDVLTSSLLTMQSNISALSAATPQLANDVITFDSTDLLSLGTVLTVSNEF FT TADDTILSTSLAGHCQVDYSEGSPQDKSMSISVSCDSSQLVSSTVHSYSADILGHGLKG FT DRTMNLMINVPGLMNPQKVTVDYVYSDGYKLNFASVVAPGAPFWINATLQLSVSPSAHN FT MLSKLTPLDNDACPGLKAQANTPILVSMTINLDDATPALGGEVIQNCVFKIHHGDDVYS FT FVTDFDVVSYTSTSGTNCLKLISSVDITSQLPSDMVIYVMNGSPDAAFTSGDSVNMSSV FT DWHQSTSQTVGNYVYTTMKAYWNVTSYDVEARPYTTYVPGKVNFTAVEHADVFVDDYNT FT GVNSYVIVNSRIYYKGTPLYIEVPSGSFIKVSYFTSPLKNPTVDTYNAEISRNSAYLIK FT ANASLDSVATMLNNISNRIDAMERLMEPTRAQQIAGVVSSIGGVISLGMPLLGAIVVTI FT GTIISIADPDKQGIDYHSVANAFMSWCQYAAVCRYEYGLLKRGDEKLDVLSFMPKRVVS FT DFKNKPDVISLPELGESVLRGSSTDYLDTGINIIYNDMQLLGQGKLSGWLNKTVSKVEN FT NAANFFERNLVKSLANKEVLPMHARVEITQTEKIGDVYRTTILYTGINEGSYLGGDVFA FT SRLGDKNILRMNGFESGPGRFKAIVESTTEVGNFRVVDWTVSGMSRYEIYAAAGEIYPS FT KDPSHADVQLLYESIVRDLTTRDGSFVLKHHDVLLLPGQLDAFEELIIRNASNYQYAFI FT GSNCQNYAHDVVDILTKFKRPQRWIKDDDFKLYIQSIYDAL" XX SQ Sequence 3511 BP; 965 A; 728 C; 818 G; 1000 T; 0 other; ggcaaaacct ggcgatggct tatcctaacg acgtcagaaa tgtttgggat gtgtacaacg 60 tgttccggga cgtgccaaac cgtgaacatt tgattcgaga tatccgcaat gggctggtta 120 cggtccggaa tctcacaaat atgcttacta atatggagcg cgatgatcaa ttgatcattg 180 ctcaactatc caatatgatg aaatcactat ctattggagt tgagaaggct caaaatgaac 240 ttagcaaatt gaagactacg gatgccgacc gtgccgcagt cttagcagct taccaaactt 300 cggtccttaa catagagcga aacactatgt tattgactgg gtacttcaag cagttagtct 360 tagacttaac tggctatgta ggtgccagtg tatatcctat cttacctttc atgattacgg 420 gggatcagtc tatgatggtt gattccgtta aggttaacat gaaaaatgta tttgatgata 480 agcatgagca ggagatagtc ctacctattc atcctgcttg ctttgtgtcg accatcactg 540 aggacacttc ttccgtagta tacgccgacg gagatgaact gtattcagtg cacgttaggc 600 acgcaaccat gactatgtat gtcaatgtgc ttggtgagac cgtcgagacc aggcagctgt 660 ctatgatagg cgaatccatc gttcctgatg atttcgcgcc ttccttgctg atattgagat 720 ttagtcaaga ttcagtcgga gaggttttct atcttagtca tggcaatatg aaaaagtttc 780 taggctacag ccttgaatat actgacaagt gcagtatatt cgacgtagcc agacgcgtat 840 ctacgacgcg taatacgata cctaatggat tctgctctgt tgatggcgtg ccgtaccttg 900 atggacggtt catttatcaa ccgagcggag ttagtgcaga tagtaatatc tgtgctatat 960 acaattcata tgttttagac acgcttagat atattactga gtgtgaagtt gatacgttaa 1020 ggtcggtgta cgatcaaact tcgtcaactt cattctcaaa gaccgatgtc ttgacatcga 1080 gtctgctaac catgcaaagt aacatttcag ctttatctgc cgctacccct caattagcga 1140 atgacgtaat cacattcgat tctaccgatc tactttctct cgggacagta ttgaccgtat 1200 cgaatgagtt tacagctgat gatacaatat taagcactag tcttgcaggt cactgccaag 1260 ttgattacag cgagggatcg cctcaagaca agagtatgag tatatctgta agctgcgatt 1320 cgtcgcagct tgtgtcatct actgtccatt cttactcagc tgacatactg gggcatggac 1380 tcaaaggtga ccgaactatg aacttaatga taaatgtacc tggacttatg aacccccaga 1440 aagtaacggt tgactatgtc tattcggatg gttacaaact gaactttgct tcagtggttg 1500 cccccggcgc gcctttctgg attaacgcaa ctctgcagct tagtgtgtca ccttcggcgc 1560 ataatatgct gagtaagtta acaccactgg ataatgatgc atgccctggg cttaaagcgc 1620 aggcaaacac gcccatactc gtatccatga ccatcaatct tgatgacgcc actcctgctt 1680 tgggagggga ggtgattcaa aactgtgtgt tcaagataca ccacggcgat gatgtgtata 1740 gcttcgtcac cgactttgat gtcgttagtt atacctcaac gtccgggacc aattgtttga 1800 agcttatatc aagcgtggat atcaccagtc agcttccctc tgacatggtg atctacgtta 1860 tgaatgggtc gcccgatgct gcttttacat ctggtgattc cgttaatatg tcatcagtgg 1920 actggcacca gtccacaagc cagactgtgg ggaattatgt ctataccacg atgaaggctt 1980 attggaatgt aacgtcgtat gatgttgagg ctcgtcctta caccacgtac gtacctggaa 2040 aggttaactt tacagccgta gagcacgctg atgtttttgt agatgactac aacactggcg 2100 ttaactcgta tgtgattgta aatagtagaa tatattataa gggaacccct ctatatattg 2160 aggtaccaag tggttcattc atcaaggtga gctacttcac aagccctttg aagaatccta 2220 ctgtggacac ttataacgct gaaatctctc gcaattcagc gtacctaatt aaagcaaatg 2280 cttcattaga ttcagtggcc acaatgctca ataatatatc gaatcgaatt gatgcaatgg 2340 aacgcttgat ggagcccaca cgtgcgcagc agattgcagg agtagtctca agcataggtg 2400 gagtcatctc actcggtatg ccattgctcg gagcgatcgt ggtaaccatc ggtactatta 2460 tctccattgc tgacccagac aaacagggca ttgattacca ctcggtggct aatgccttta 2520 tgtcctggtg ccagtatgcg gcggtctgta ggtatgaata tggacttctg aagcgtggag 2580 atgagaaact agatgtgttg tcatttatgc cgaagcgtgt cgtgtcggat ttcaaaaata 2640 aacccgacgt tattagtctc ccagaattag gtgaatcagt actacgtgga tcaagcactg 2700 actatctaga cacggggatt aatatcattt ataatgatat gcaattgctt ggacaaggca 2760 aactctctgg ctggctcaac aaaactgtga gcaaggtgga gaataatgct gccaacttct 2820 ttgagaggaa tttggttaaa agtcttgcga ataaggaagt cctaccaatg catgctcgag 2880 ttgagattac tcaaaccgag aaaattggtg atgtgtatag gactacgatc ctatatacag 2940 ggataaatga aggatcatat ttgggtgggg atgtctttgc ttcgcggttg ggggacaaaa 3000 acatcttgcg tatgaatgga tttgaaagcg gaccaggaag gttcaaagct atcgtcgaat 3060 caactactga agtaggcaac tttcgtgtag ttgattggac ggtgtctgga atgtccaggt 3120 acgagattta tgccgctgcc ggtgaaatat atccgagcaa agacccctct catgctgatg 3180 tacagctgct atacgaaagc atagttcggg atctaaccac tcgggatggt agcttcgttc 3240 tgaagcatca tgatgtcctg cttctgcctg ggcaacttga cgcttttgag gagctaatca 3300 taagaaatgc ctcaaattac caatatgcgt ttattggttc aaactgtcaa aattatgcgc 3360 atgatgtggt cgatatcttg actaagttca agcgaccaca aaggtggatt aaagatgatg 3420 acttcaagtt gtacatccaa tctatctatg atgcattgtg atatgtacca gccagggctc 3480 agatgtatgc gtacttctga gttaaaatga t 3511 //