ID   AB000845; SV 1; linear; genomic RNA; STD; VRL; 1211 BP.
XX
AC   AB000845;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat
DE   protein), partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1211
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; 95c31e37b065308a493909274e4908af.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1211
FT                   /organism="Onion yellow dwarf virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="shallot"
FT                   /clone="Si-4"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1000
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55513"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55513"
FT                   /protein_id="BAA24793.1"
FT                   /translation="YPDLVHEIRKFYQWLLEQAPYSMIAQSGQAPYIAETALRKLYTNV
FT                   DASEGELEKYYEVYLSLENEETVLKEVRYQAGSSEDTAAQPSTSKQIAKQKDKDVDAGT
FT                   TGKFSVPKIKALSDKMRFPKVGRLVVLNAEHLLTYKPEQIELYNTRATQRQFESWYTAI
FT                   KTEYDVNDEQMKIILNGLMVWCIENGTSPNLSGSWTMMDGDEQVEYPLAPILDNAKPTF
FT                   RQIMAHFSDAAEAYIEYRNATERYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE
FT                   AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLLGIRM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     227..997
FT                   /product="coat protein"
XX
SQ   Sequence 1211 BP; 406 A; 223 C; 285 G; 297 T; 0 other;
     ttatcctgat cttgtgcatg aaatacggaa gttctaccaa tggttactgg agcaggctcc        60
     ttacagtatg atagcacaga gtgggcaagc accatacata gcagagacag ctctcagaaa       120
     gctatacacc aatgttgatg cgagtgaggg cgaattagaa aaatactatg aggtttattt       180
     aagccttgag aatgaagaaa cagtcttaaa agaagtgcga tatcaagcag gaagtagtga       240
     agacacagca gctcaaccaa gtacgtcaaa gcagatagcg aaacagaaag ataaagatgt       300
     cgatgcagga accacaggta aattttcggt gcccaagatc aaagcattat ctgataaaat       360
     gcgattccca aaagtcgggc gacttgtagt gctcaatgcc gaacatttgt taacatacaa       420
     gcccgaacaa attgaattat acaacacaag ggctacacaa cgccaatttg agagttggta       480
     cacagccatt aagacggagt atgacgtcaa tgatgagcaa atgaaaatta tattgaatgg       540
     tttaatggtc tggtgtattg agaatggtac atcaccaaat ttgtcaggat cctggactat       600
     gatggatgga gatgagcaag ttgaatatcc actagcaccg attctagaca atgcaaaacc       660
     aacgtttaga cagattatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag       720
     aaacgccacg gaaagataca tgccccggta tggtcttcag cgaaatttaa cagaactcag       780
     tttggctcgt tacgcattcg atttttatga aatgacctca aagactccga agcgagctaa       840
     agaggcgcac atgcaaatga aggcggctgc ggttagaggg gcaactaatc gcttgtttgg       900
     cctggatggt aacgtcaaca caacagaaga ggacacggaa agacacacag ctgcggacat       960
     aaataagaac cagcacacgc tgctgggcat taggatgtaa taccgcatgt ttgtctttag      1020
     ttttatatat ttatatatat aagaacgtaa gtaatatgta ttccttttcg cttcgtttaa      1080
     tctgacttcg agcaacgaaa tgtggtgtac cactagttgt ggcgaacgat acggttaaac      1140
     atctgtgatt aatgtcgagc tctatgagtg tgaagtatca cgaggtggat cttggcgtga      1200
     attacagaga c                                                           1211
//