ID   AB000844; SV 1; linear; genomic RNA; STD; VRL; 1200 BP.
XX
AC   AB000844;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   23-JAN-2009 (Rel. 99, Last updated, Version 6)
XX
DE   Welsh onion yellow stripe virus RNA for polyprotein (RNA polymerase and
DE   coat protein), partial cds.
XX
KW   .
XX
OS   Welsh onion yellow stripe virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1200
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; 69f4e9b92a691050477723eec6705a89.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1200
FT                   /organism="Welsh onion yellow stripe virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="shallot"
FT                   /clone="Si-2N"
FT                   /db_xref="taxon:62060"
FT   CDS             <1..1003
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55512"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55512"
FT                   /protein_id="BAA24792.1"
FT                   /translation="YDELLHEIRLFYKWVLEQAPYNLIAQTGKAPYIAETALKRLYMDE
FT                   QVTESELEKYSRLYQILDERIPTPSYVSYQAIETEDAANVNTDKQVGKNKDKDKDVDVG
FT                   TSGEFSVPKVKMLSDKMRLPRIGKKVILNGKHLLSYKPDQIDLYNTRATHAQFKTWYEA
FT                   VKLEYELTDEQMRIVMNGLMVWCIENGTSQNLTGVWTMMDGDNQMEYPLSPIVDNAKPT
FT                   FRQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLREYSLARYAFDFYEMNSKTPIRAK
FT                   EAHMQMKAAAVRGAANRMFGLDGNIGTDDENTERHTAADVNKDHHTLLGLRM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     227..1000
FT                   /product="coat protein"
XX
SQ   Sequence 1200 BP; 411 A; 208 C; 284 G; 297 T; 0 other;
     ttacgatgaa ttgctacacg aaatcagatt attttataag tgggtgttag agcaagcacc        60
     gtacaatcta atagcgcaaa caggaaaagc tccgtatata gcagagacgg cattgaagag       120
     attatatatg gatgagcaag taacagagag tgaacttgag aagtatagcc gactatacca       180
     gattttggat gagcgcatac caacaccaag ttatgtatcg tatcaagcaa tagaaacaga       240
     agacgctgcg aatgtaaaca ccgacaagca agtcggaaag aacaaggata aggataaaga       300
     tgttgatgtc ggcacgtcag gtgagttttc agtgccaaag gtgaaaatgt tatcagataa       360
     aatgcgtttg ccacgaattg gaaagaaggt gatactcaac ggcaaacatc ttttatctta       420
     taaacctgat caaattgatt tgtataacac acgagccaca cacgcacagt tcaaaacgtg       480
     gtacgaggcg gtgaaactag aatatgaatt gacggatgaa caaatgagaa tagtcatgaa       540
     tggtctgatg gtgtggtgca ttgagaatgg cacatcacaa aatttgacgg gggtttggac       600
     gatgatggat ggcgacaacc aaatggagta cccactcagt cctattgttg ataatgcaaa       660
     acccacattt agacaaataa tggcacattt cagtgacgca gctgaagcgt acattgaata       720
     taggaatgcc acagaaaaat acatgcctcg gtatggactt cagcgaaatt taagagaata       780
     cagcctagca cgttacgcat tcgactttta tgagatgaat tcaaagacgc cgatccgcgc       840
     gaaggaagct catatgcaga tgaaagcggc agcggttaga ggggcagcta accgtatgtt       900
     tggcttggat ggtaacatag gcaccgatga tgagaacaca gaacgacata cagcagctga       960
     tgtgaataag gatcatcaca cgctgctcgg tcttcgtatg taataaacat atatatattt      1020
     aatatatagt gtcgtgcatt atctttcgtt atatttgaat atgagcaaac atagtgtggt      1080
     taaaccaccg tttgtggcat agtatatgat ataacttcgc tagcattatt tgcaccataa      1140
     gactcagtgt ggtggtacca cgataaaata gtcgagtgtt gtacgttttg ctagagagac      1200
//