ID   AB000843; SV 1; linear; genomic RNA; STD; VRL; 1210 BP.
XX
AC   AB000843;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat
DE   protein), partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1210
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; bff695fe96309a994239276208297df0.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1210
FT                   /organism="Onion yellow dwarf virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="shallot"
FT                   /clone="Si-2G"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1000
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55511"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55511"
FT                   /protein_id="BAA24791.1"
FT                   /translation="YPDLVHEIRKFYQWLLEQAPYSMIAQSGQAPYIAETALRKLYTNV
FT                   DASERELEKYYEVYLNLENEETVSKEVRYQAGGSEDAAAQPSTSKQISKQKDRDVDAGT
FT                   TGKFSVPKIKALSDKMRFPKVGQLVVLNAEHLLTYKPEQIELYNTRATQRQFESWYTAI
FT                   KTEYDVNDEQMKIILNGLMVWCIENGTSPNLSGTWTMMDGDEQVEYPLAPILDNAKPTF
FT                   RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE
FT                   AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADINKNQHTLLGIRM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     227..997
FT                   /product="coat protein"
XX
SQ   Sequence 1210 BP; 399 A; 230 C; 284 G; 297 T; 0 other;
     ctatcctgat cttgtgcatg aaatacgaaa attctaccaa tggttactgg agcaggctcc        60
     ttacagtatg atagcacaaa gtgggcaagc gccatacata gcggaaacag ctcttagaaa       120
     gctatacact aatgttgacg cgagcgaacg tgaattggaa aaatactatg aagtctactt       180
     aaaccttgag aatgaagaaa cagtctctaa agaggtgcga tatcaagcag ggggtagtga       240
     agatgcagca gctcaaccaa gtacgtcaaa gcagatatca aaacagaagg atagggatgt       300
     cgacgcaggc actacaggta agttttcggt gcccaagata aaagcgctat ctgataaaat       360
     gcgatttccg aaagtcgggc aacttgttgt gctcaatgcc gaacatttgt taacatataa       420
     gcccgaacaa atcgaattgt acaacacaag ggcaacacaa cgccaatttg agagttggta       480
     cacggccatt aagacagaat acgatgtcaa tgatgagcag atgaaaatta tattaaatgg       540
     tttaatggtc tggtgtattg aaaatggcac ttctccaaac ctgtcaggaa cctggactat       600
     gatggatgga gatgagcaag ttgaataccc actagcaccg attttagaca atgcaaaacc       660
     tacgtttagg cagattatgg cgcatttcag tgatgcagct gaagcataca ttgaatatag       720
     gaacgccacg gaaaaataca tgccccggta tggtcttcag cgaaatttaa cagaacttag       780
     tttggcgcgt tacgcattcg atttttatga aatgacttca aagactccaa aacgggctaa       840
     agaggcacat atgcaaatga aggcggctgc ggttagaggg gcaactaacc gcttgtttgg       900
     cctggatggt aacgtcaaca cgacagaaga ggacacggaa agacacacag ctgcggacat       960
     aaataagaac cagcacacgc tgcttggcat taggatgtga aaccgcacgt ttgtctttag      1020
     ttttatatat ttacttatat aaaaacgtat gtaatatgta ttccttttcc ttcgtttaac      1080
     ctgacttcga gcaacgaaat gtggtgtacc actagttgtg gcgaacgata cggttaaaca      1140
     tctgtgatta atgtcgagct ttatgagtgt gaagtatccc gaggtgaatc ttggcgtgaa      1200
     ttacagagac                                                             1210
//