ID   AB000840; SV 1; linear; genomic RNA; STD; VRL; 1215 BP.
XX
AC   AB000840;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus NIb gene for polyprotein, partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1215
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; bd9ea4de1a8ff146e0c4944b8f926e8a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1215
FT                   /organism="Onion yellow dwarf virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="garlic"
FT                   /clone="Gzm"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1000
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55508"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55508"
FT                   /protein_id="BAA24788.1"
FT                   /translation="YPDLVHEIRKFYQWLLEQAPYNMIAQDGKAPYIAETALKKLFTDI
FT                   DASEAELEQYYAMYLTLEDQEHIIKEVRYQAGDTEDAAAQSSDARRIAKQKDKDVDAGT
FT                   TGKFTVPRIKALSDKMRFPKVGKNVVLNAEHLLAYKPEQIELYNTRATQRQFENWFMAV
FT                   KKEYDVDDEQMKILLDGLMVWCIENGTSPNLSGNWTMMDGDEQIEYPLAPVLDNAKPTF
FT                   RQIMAHFSDAAEAYIEYRNATEKYMPRYGIQRNLTELSLARYAFDFYEMTSKTPKRAKE
FT                   AHMQMKAAAVRGATNRLFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIKM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     <227..997
FT                   /product="coat protein"
XX
SQ   Sequence 1215 BP; 414 A; 223 C; 283 G; 295 T; 0 other;
     ttatcccgac ttggtgcacg aaataaggaa attttatcag tggttgctag aacaagctcc        60
     gtataatatg atagcgcaag atggtaaggc tccgtacata gcagagacag ctcttaagaa       120
     gctatttact gacatcgacg cgagtgaggc cgaacttgaa caatattatg cgatgtatct       180
     aacacttgaa gatcaagaac acattattaa ggaagttcga taccaagctg gagatacaga       240
     agatgctgca gcacaatcaa gtgatgcaag gcgaatcgca aagcagaaag ataaggatgt       300
     tgatgctgga acaactggaa aattcacagt acctagaatc aaagcactct ccgataaaat       360
     gcgatttccc aaagttggca agaatgtagt actcaatgcg gagcatctat tagcgtataa       420
     accagaacaa atagagctat acaatacgag agcgacacaa cgccaattcg agaattggtt       480
     tatggcagtg aagaaggagt acgacgtgga cgatgaacaa atgaaaattt tactggatgg       540
     gctaatggtt tggtgcattg aaaatggtac atctccgaac ctgtcaggta attggactat       600
     gatggatggt gatgaacaaa ttgagtatcc attagcacca gttttagata atgctaaacc       660
     aacgtttaga cagataatgg cgcacttcag tgatgcagct gaagcataca ttgaataccg       720
     aaacgccacc gaaaaataca tgccccggta tggaattcag cgcaatttaa cagaattgag       780
     tttagcacgt tacgcattcg acttttatga aatgacttcg aaaactccta agcgagcgaa       840
     agaagcacat atgcaaatga aggcggcagc agttagaggg gcaactaatc gcttgtttgg       900
     cctggatggt aacgtaaaca ccacagaaga ggacacggaa agacacacgg cggcagatgt       960
     gaataaaaat cagcacacgt tgctgggcat caagatgtaa catcgcacca atgtgtctct      1020
     agtcttatat aaatatatct atgtaagaac gtatgtaata tgtaattctc ttcgtttcgt      1080
     ttaacctgac tttgagcagt aaaatgtggt gtaccactag ctgtggcaaa cgatacggtt      1140
     aaacatctgt gattaatgtt gagcttcatg agggtggttt cccacgaggt gaatcttagc      1200
     gtgaattaca gagac                                                       1215
//