ID   AB000838; SV 1; linear; genomic RNA; STD; VRL; 1215 BP.
XX
AC   AB000838;
XX
DT   11-FEB-1998 (Rel. 54, Created)
DT   16-JAN-2009 (Rel. 99, Last updated, Version 5)
XX
DE   Onion yellow dwarf virus NIb gene for polyprotein (RNA polymerase and coat
DE   protein), partial cds.
XX
KW   .
XX
OS   Onion yellow dwarf virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1215
RA   Sumi S.;
RT   ;
RL   Submitted (03-FEB-1997) to the INSDC.
RL   Contact:Shin-ichiro Sumi Wakunaga Pharmaceutical Co., Ltd., Institute for
RL   Biotechnology Research; 1624 Shimokotachi, Koda-Cho, Takata-Gun, Hiroshima
RL   739-11, Japan
XX
RN   [2]
RX   DOI; 10.1007/s007050050271.
RX   PUBMED; 9505969.
RA   Tsuneyoshi T., Matsumi T., Natsuaki K.T., Sumi S.;
RT   "Nucleotide sequence analysis of virus isolates indicates the presence of
RT   three potyvirus species in Allium plants";
RL   Arch. Virol. 143(1):97-113(1998).
XX
DR   MD5; 1c9a94e7ccff407f4981fa8f5e04044b.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1215
FT                   /organism="Onion yellow dwarf virus"
FT                   /mol_type="genomic RNA"
FT                   /isolation_source="garlic"
FT                   /clone="Gfw"
FT                   /db_xref="taxon:43130"
FT   CDS             <1..1000
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /gene="NIb"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O55506"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O55506"
FT                   /protein_id="BAA24786.1"
FT                   /translation="YPDLLHEIRKFYQWLLEQAPYNVIAQSGKAPYIAETALKKLFTNI
FT                   DASEAELEKYYEVYMDLENEEAIPKKVRYQAGEGEDAAAQSSTSQQVAKQKDKDVDTGT
FT                   TGKFAIPRIKALSDKMRFPKVGKTVVLNAEHLLAYKPEQIELYNTRSTKQQFENWYNAI
FT                   KKEYDVNDEQMKILLNGLMVWCIENGTSPNLSGNWTMMDGDDQIEYPLAPIVDNAKPTF
FT                   RQIMAHFSDAAEAYIEYRNATEKYMPRYGLQRNLTELSLARYAFDFYEMTSKTPKRAKE
FT                   AHMQMKAAAIRGVTNRMFGLDGNVNTTEEDTERHTAADVNKNQHTLLGIKM"
FT   mat_peptide     <1..226
FT                   /product="RNA-dependent RNA polymerase"
FT                   /note="C-terminal portion"
FT   mat_peptide     <227..997
FT                   /product="coat protein"
XX
SQ   Sequence 1215 BP; 429 A; 210 C; 273 G; 303 T; 0 other;
     ttacccagat cttttgcacg aaattcggaa attttatcaa tggctcttag aacaagctcc        60
     atataacgta atagctcaga gcggaaaagc accttacata gcagaaacag ctctcaaaaa       120
     gttgtttact aacattgatg caagtgaggc agaattggag aaatattatg aagtatatat       180
     ggaccttgaa aatgaagagg caattccgaa gaaggtccgc taccaggcag gagaagggga       240
     agatgcagca gcacaatcaa gcacgtcaca acaagtcgca aagcagaagg acaaggatgt       300
     tgatactggc actactggta aatttgcaat cccgagaatt aaagcgctgt ctgataaaat       360
     gagatttcca aaagttggta agaccgttgt actcaacgca gaacacttgt tggcatacaa       420
     gccagaacag attgaattgt acaataccag atcaacaaag cagcaatttg agaactggta       480
     taatgcaata aagaaagaat atgatgtcaa cgatgagcaa atgaaaattt tactaaatgg       540
     attaatggtt tggtgcattg agaacggaac atctccaaat ttatcaggaa attggactat       600
     gatggatggt gatgaccaaa ttgaatatcc gttggcgcct attgtggata acgcgaaacc       660
     aacatttagg caaataatgg cgcatttcag tgatgcggct gaagcataca ttgaatatag       720
     gaacgccaca gaaaaatata tgccccgata tggacttcag cgaaatttaa cagaacttag       780
     tttggcacgt tacgcattcg atttttacga gatgacttca aaaactccta aacgagcaaa       840
     agaagcgcac atgcaaatga aggcggctgc gattagaggg gtaactaacc gcatgtttgg       900
     cctggatggt aacgtaaaca ctacagaaga ggacacggaa agacacacag cagcggatgt       960
     caataagaac cagcacacgt tgcttgggat aaaaatgtga aaccatgttg ttgtctttag      1020
     ttttatatat atatatagtt atataaaaac gtatgtaata tgtaatcctc ttcatttcgt      1080
     ttaatctgcc ttcgagcaac gaaatgtggt gtaccactag ttgtggcgaa cgatacggtt      1140
     aaacatctgt gattaatgtt gaacttcatg agagtgatgt atcacgaggt gaattttggc      1200
     gtgaattacg gagac                                                       1215
//