Dbfetch

Dbfetch

ID   KF766501; SV 1; linear; genomic DNA; STD; HUM; 1726 BP.
XX
AC   KF766501;
XX
DT   28-JAN-2014 (Rel. 119, Created)
DT   28-JAN-2014 (Rel. 119, Last updated, Version 1)
XX
DE   Homo sapiens isolate 12020942 killer cell immunoglobulin receptor (KIR2DL3)
DE   gene, KIR2DL3*00101 variant allele, complete cds.
XX
KW   .
XX
OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
XX
RN   [1]
RP   1-1726
RA   Deng Z., Zhen J., Xu Y.;
RT   "Characterization of CDNA sequences of KIR-2DL3 gene using in-house
RT   SBT-mehtod in Chinese individuals";
RL   Unpublished.
XX
RN   [2]
RP   1-1726
RA   Deng Z., Zhen J., Xu Y.;
RT   ;
RL   Submitted (23-OCT-2013) to the INSDC.
RL   Immunogenetic Laboratory, Shenzhen Blood Center, 6th Floor, 1 Building, 21
RL   Yard, Tianbei One Road, Luohu District, Shenzhen, Guangdong 518035, China
XX
DR   MD5; cf8e84f73258bff900ab884dae70e0ba.
DR   IPD-KIR; KIR2DL3*029; KIR00738.
XX
CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1726
FT                   /organism="Homo sapiens"
FT                   /isolate="12020942"
FT                   /mol_type="genomic DNA"
FT                   /PCR_primers="fwd_name: 2dl3 cds-f, fwd_seq:
FT                   cgctcatggtcgtcagcatgg, rev_name: 2dl3 cds-r, rev_seq:
FT                   tacattggagctggcaaccca"
FT                   /db_xref="taxon:9606"
FT   gene            <1..>1726
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*00101 variant"
FT   mRNA            join(<1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..1320,1421..1473,1574..>1726)
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*00101 variant"
FT                   /product="killer cell immunoglobulin receptor"
FT   CDS             join(1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..1320,1421..1473,1574..1726)
FT                   /codon_start=1
FT                   /gene="KIR2DL3"
FT                   /allele="KIR2DL3*00101 variant"
FT                   /product="killer cell immunoglobulin receptor"
FT                   /protein_id="AHG97679.1"
FT                   /translation="MSLMVVSMVCVGFFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETV
FT                   ILQCWSDVRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV
FT                   THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSRE
FT                   GEAHESRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTG
FT                   NPSNSWPSPTEPSSETGNPRHLHVLIGTSVVIILFILLLFFLLHRWCCNKKNAVVMDQE
FT                   PAGNRTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRPSQRPKTPPTDIIVYTELPNAE
FT                   P"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             171..270
FT                   /estimated_length=unknown
FT   gap             571..670
FT                   /estimated_length=unknown
FT   gap             965..1064
FT                   /estimated_length=unknown
FT   gap             1116..1215
FT                   /estimated_length=unknown
FT   gap             1321..1420
FT                   /estimated_length=unknown
FT   gap             1474..1573
FT                   /estimated_length=unknown
XX
SQ   Sequence 1726 BP; 244 A; 305 C; 242 G; 235 T; 700 other;
     atgtcgctca tggtcgtcag catggtgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnggttct tcttgctgca gggggcctgg ccacatgagg nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gagtccacag aaaaccttcc ctcctggccc       300
     acccaggtcc cctggtgaaa tcagaagaga cagtcatcct gcaatgttgg tcagatgtca       360
     ggtttcagca cttccttctg cacagagaag ggaagtttaa ggacactttg cacctcattg       420
     gagagcacca tgatggggtc tccaaggcca acttctccat cggtcccatg atgcaagacc       480
     ttgcagggac ctacagatgc tacggttctg ttactcactc cccctatcag ttgtcagctc       540
     ccagtgaccc tctggacatc gtcatcacag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn gtctatatga gaaaccttct ctctcagccc agccgggccc cacggttctg       720
     gcaggagaga gcgtgacctt gtcctgcagc tcccggagct cctatgacat gtaccatcta       780
     tccagggagg gggaggccca tgaaagtagg ttctctgcag ggcccaaggt caacggaaca       840
     ttccaggccg actttcctct gggccctgcc acccacggag gaacctacag atgcttcggc       900
     tctttccgtg actctccata cgagtggtca aactcgagtg acccactgct tgtttctgtc       960
     acagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngaaacc cttcaaatag      1080
     ttggccttca cccactgaac caagctccga aaccgnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnngtaac cccagacacc tgcatgttct gattgggacc tcagtggtca      1260
     tcatcctctt catcctcctc ctcttctttc tccttcatcg ctggtgctgc aacaaaaaaa      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn atgctgttgt aatggaccaa      1440
     gagcctgcag ggaacagaac agtgaacagg gagnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1560
     nnnnnnnnnn nnngactctg atgaacaaga ccctcaggag gtgacatatg cacagttgaa      1620
     tcactgcgtt ttcacacaga gaaaaatcac tcgcccttct cagaggccca agacaccccc      1680
     aacagatatc atcgtgtaca cggaacttcc aaatgctgag ccctga                     1726
//