Dbfetch

Dbfetch

ID   KC261294; SV 1; linear; genomic DNA; STD; HUM; 1726 BP.
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AC   KC261294;
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DT   13-MAR-2013 (Rel. 116, Created)
DT   13-MAR-2013 (Rel. 116, Last updated, Version 1)
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DE   Homo sapiens clone 9000611001796r KIR2DL3 gene, partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RP   1-1726
RA   He Y., Tao S., Zhu F.;
RT   "Ten KIR2DL3 alleles were identified by PCR-SBT";
RL   Unpublished.
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RN   [2]
RP   1-1726
RA   He Y., Tao S., Zhu F.;
RT   ;
RL   Submitted (02-DEC-2012) to the INSDC.
RL   HLA Laboratory, Transfusion Institute, Blood Center of Zhejiang Province,
RL   Wulin Road 345, Hangzhou, Zhejiang 310006, China
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DR   MD5; 407b49b9b3b8ed3f0c4b6984fd897031.
DR   IPD-KIR; KIR2DL3*020; KIR00693.
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CC   ##Assembly-Data-START##
CC   Sequencing Technology :: Sanger dideoxy sequencing
CC   ##Assembly-Data-END##
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FH   Key             Location/Qualifiers
FH
FT   source          1..1726
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /clone="9000611001796r"
FT                   /db_xref="taxon:9606"
FT   variation       1..1726
FT                   /replace="g"
FT   mRNA            join(<1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..>1319)
FT                   /product="KIR2DL3"
FT   CDS             join(1..34,135..170,271..570,671..964,1065..1115,
FT                   1216..>1319)
FT                   /codon_start=1
FT                   /product="KIR2DL3"
FT                   /note="coding region disrupted by sequencing gap"
FT                   /db_xref="GOA:M4N6D4"
FT                   /db_xref="InterPro:IPR003599"
FT                   /db_xref="InterPro:IPR013151"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="InterPro:IPR036179"
FT                   /db_xref="UniProtKB/TrEMBL:M4N6D4"
FT                   /protein_id="AGG79420.1"
FT                   /translation="MSLMVVSMVCVGFFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETV
FT                   ILQCWSDVRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV
FT                   THSPYQLSAPSDPLDIVITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSRE
FT                   GEAHERRFSAGPKVNGTFQADFPLGPATHGGTYRCFGSFHDSPYEWSNSSDPLLVSVTG
FT                   NPSNSWPSPTEPSSETGNPRHLHVLIGTSVVIILFILLLFFLLHRWCCNKK"
FT   gap             35..134
FT                   /estimated_length=unknown
FT   gap             171..270
FT                   /estimated_length=unknown
FT   gap             571..670
FT                   /estimated_length=unknown
FT   gap             965..1064
FT                   /estimated_length=unknown
FT   gap             1116..1215
FT                   /estimated_length=unknown
FT   gap             1320..1419
FT                   /estimated_length=unknown
FT   mRNA            join(<1421..1473,1574..>1726)
FT                   /product="KIR2DL3"
FT   CDS             join(<1421..1473,1574..1726)
FT                   /codon_start=3
FT                   /product="KIR2DL3"
FT                   /note="coding region disrupted by sequencing gap"
FT                   /db_xref="UniProtKB/TrEMBL:M4N692"
FT                   /protein_id="AGG79421.1"
FT                   /translation="AVVMDQEPAGNRTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRP
FT                   SQRPKTPPTDIIVYTELPNAEP"
FT   gap             1474..1573
FT                   /estimated_length=unknown
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SQ   Sequence 1726 BP; 244 A; 306 C; 241 G; 235 T; 700 other;
     atgtcgctca tggtcgtcag catggtgtgt gttgnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     nnnnnnnnnn nnnnggttct tcttgctgca gggggcctgg ccacatgagg nnnnnnnnnn       180
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       240
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gagtccacag aaaaccttcc ctcctggccc       300
     acccaggtcc cctggtgaaa tcagaagaga cagtcatcct gcaatgttgg tcagatgtca       360
     ggtttcagca cttccttctg cacagagaag ggaagtttaa ggacactttg cacctcattg       420
     gagagcacca tgatggggtc tccaaggcca acttctccat cggtcccatg atgcaagacc       480
     ttgcagggac ctacagatgc tacggttctg ttactcactc cccctatcag ttgtcagctc       540
     ccagtgaccc tctggacatc gtcatcacag nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       600
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       660
     nnnnnnnnnn gtctatatga gaaaccttct ctctcagccc agccgggccc cacggttctg       720
     gcaggagaga gcgtgacctt gtcctgcagc tcccggagct cctatgacat gtaccatcta       780
     tccagggagg gggaggccca tgaacgtagg ttctctgcag ggcccaaggt caacggaaca       840
     ttccaggccg actttcctct gggccctgcc acccacggag gaacctacag atgcttcggc       900
     tctttccatg actctccata cgagtggtca aactcgagtg acccactgct tgtttctgtc       960
     acagnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1020
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnngaaacc cttcaaatag      1080
     ttggccttca cccactgaac caagctccga aaccgnnnnn nnnnnnnnnn nnnnnnnnnn      1140
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1200
     nnnnnnnnnn nnnnngtaac cccagacacc tgcatgttct gattgggacc tcagtggtca      1260
     tcatcctctt catcctcctc ctcttctttc tccttcatcg ctggtgctgc aacaaaaaan      1320
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1380
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnna atgctgttgt aatggaccaa      1440
     gagcctgcag ggaacagaac agtgaacagg gagnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1560
     nnnnnnnnnn nnngactctg atgaacaaga ccctcaggag gtgacatatg cacagttgaa      1620
     tcactgcgtt ttcacacaga gaaaaatcac tcgcccttct cagaggccca agacaccccc      1680
     aacagatatc atcgtgtaca cggaacttcc aaatgctgag ccctga                     1726
//