Dbfetch

Dbfetch

ID   GU070843; SV 1; linear; genomic DNA; STD; HUM; 1784 BP.
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AC   GU070843;
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DT   31-OCT-2010 (Rel. 106, Created)
DT   14-NOV-2012 (Rel. 114, Last updated, Version 2)
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DE   Homo sapiens cell-line NMDP20 killer cell immunoglobulin-like receptor
DE   KIR3DL3 (KIR3DL3) gene, KIR3DL3*005 allele, partial cds.
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KW   .
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OS   Homo sapiens (human)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
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RN   [1]
RC   Publication Status: Online-Only
RP   1-1784
RX   PUBMED; 23139747.
RA   Vierra-Green C., Roe D., Hou L., Hurley C.K., Rajalingam R., Reed E.,
RA   Lebedeva T., Yu N., Stewart M., Noreen H., Hollenbach J.A., Guethlein L.A.,
RA   Wang T., Spellman S., Maiers M.;
RT   "Allele-Level Haplotype Frequencies and Pairwise Linkage Disequilibrium for
RT   14 KIR Loci in 506 European-American Individuals";
RL   PLoS One 7(11):E47491-E47491(2012).
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RN   [2]
RP   1-1784
RA   Hou L., Hurley C.K., Jiang B., Chen M.;
RT   "Investigation of killer cell immunoglobulin-like receptor gene diversity";
RL   Unpublished.
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RN   [3]
RP   1-1784
RA   Hou L., Hurley C.K., Jiang B., Chen M.;
RT   ;
RL   Submitted (08-OCT-2009) to the INSDC.
RL   Oncology/ C.W.Bill Young Department of Defense Marrow Donor Program,
RL   Georgetown University Medical Center, 11333 Woodglen Drive, Rockville, MD
RL   20852, USA
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DR   MD5; 6b4b39281dd53ed5cc1ce40c084b6668.
DR   IPD-KIR; KIR3DL3*042; KIR00552.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1784
FT                   /organism="Homo sapiens"
FT                   /mol_type="genomic DNA"
FT                   /cell_line="NMDP20"
FT                   /db_xref="taxon:9606"
FT   gene            <3..>1784
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*005"
FT   mRNA            join(<3..21,122..406,507..806,907..1200,1301..1405,
FT                   1506..1558,1659..>1784)
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*005"
FT                   /product="killer cell immunoglobulin-like receptor KIR3DL3"
FT   CDS             join(<3..21,122..406,507..806,907..1200,1301..1405,
FT                   1506..1558,1659..1784)
FT                   /codon_start=1
FT                   /gene="KIR3DL3"
FT                   /allele="KIR3DL3*005"
FT                   /product="killer cell immunoglobulin-like receptor KIR3DL3"
FT                   /protein_id="ADI95470.1"
FT                   /translation="GPWPHVGGQDKPFLSAWPGTVVSEGQHVTLQCRSRLGFNEFSLSK
FT                   EDGMPVPELYNRIFRNSFLMGPVTPAHAGTYRCCSSHPHSPTGWSAPSNPVVIMVTGVH
FT                   RKPSLLAHPGPLVKSGETVILQCWSDVRFERFLLHREGITEDPLRLVGQLHDAGSQVNY
FT                   SMGPMTPALAGTYRCFGSVTHLPYELSAPSDPLDIVVVGLYGKPSLSAQPDPTVQAGEN
FT                   VTLSCSSRSLFDIYHLSREAEAGELRLTAVLRVNGTFQANFPLGPVTHGGNYRCFGSFR
FT                   ALPHAWSDPSDPLPVSVTGNSRNLHVLIGTSVVIIPFAILLFFLLHRWCANKKNAVVMD
FT                   QEPAGNRTVNREDSDEQDPQEVTYAQLNHCVFTQRKITRPSQRPKTPPTDTSV"
FT   gap             22..121
FT                   /estimated_length=unknown
FT   gap             407..506
FT                   /estimated_length=unknown
FT   gap             807..906
FT                   /estimated_length=unknown
FT   gap             1201..1300
FT                   /estimated_length=unknown
FT   gap             1406..1505
FT                   /estimated_length=unknown
FT   gap             1559..1658
FT                   /estimated_length=unknown
XX
SQ   Sequence 1784 BP; 259 A; 356 C; 299 G; 270 T; 600 other;
     aggggccctg gccacatgtg gnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn        60
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       120
     ngtggtcagg acaagccctt cctctctgcc tggcccggca ctgtggtgtc tgaaggacaa       180
     catgtgactc ttcagtgtcg ctctcgtctt gggtttaatg aattcagtct gtccaaagaa       240
     gacgggatgc ctgtccctga gctctacaac agaatattcc ggaacagctt tctcatgggc       300
     cctgtgaccc cagcacatgc agggacctac agatgttgca gttcacaccc acactccccc       360
     actgggtggt cggcacccag caaccctgtg gtgatcatgg tcacagnnnn nnnnnnnnnn       420
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       480
     nnnnnnnnnn nnnnnnnnnn nnnnnngagt ccacagaaaa ccttccctcc tggcccaccc       540
     aggtcccctg gtgaaatcag gagagacggt catcctgcaa tgttggtcag atgtcaggtt       600
     tgagcgcttc cttctgcaca gagaggggat cactgaggac cccttgcgcc tcgttggaca       660
     gctccacgat gcgggttccc aggtcaacta ttccatgggt cccatgacac ctgcccttgc       720
     agggacctac agatgctttg gttctgtcac tcacttaccc tatgagttgt cggctcccag       780
     tgaccctctg gacatcgtgg tcgtagnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       840
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn       900
     nnnnnngtct atatgggaaa ccttctctct cagcccagcc ggaccccacg gttcaggcag       960
     gagagaatgt gaccttgtcc tgcagctctc ggagcttgtt tgacatttac catctatcca      1020
     gggaggcaga ggccggtgaa cttaggctca ctgcagtgct gagggtcaat ggaacattcc      1080
     aggccaactt ccctctgggc cctgtgaccc acggagggaa ctacagatgc ttcggctctt      1140
     tccgtgccct gccccacgcg tggtcagacc cgagtgaccc actgcccgtt tctgtcacag      1200
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1260
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn gtaactccag aaacctgcac      1320
     gttctgattg ggacctcagt ggtcatcatc ccctttgcta tcctcctctt ctttctcctt      1380
     catcgctggt gtgccaacaa aaagannnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1440
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1500
     nnnnnatgct gttgtaatgg accaagagcc tgcagggaac agaacagtga acagggagnn      1560
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn      1620
     nnnnnnnnnn nnnnnnnnnn nnnnnnnnnn nnnnnnnnga ctctgatgaa caagaccctc      1680
     aggaggtgac atacgcacag ttgaatcact gcgttttcac acagagaaaa atcactcgcc      1740
     cttctcagag gcccaagaca cccccaacag ataccagcgt gtaa                       1784
//