Dbfetch
ID X52916; SV 1; linear; gDNA; STD; MUS; 2014 BP. XX AC X52916; X52597; XX DT 13-SEP-2012 (Rel. 201237-4, arrived in LIGM-DB) DT 16-JUN-2024 (Rel. 202424-0, Last updated, Version 5) XX DE M. musculus H-2L(q) gene for H-2L(q) antigen. 3' partial cds. XX KW antigen receptor; RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); conventional-with-leader; KW regular; gDNA; undefined; functional. XX OS Mus musculus (house mouse) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; OC Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus. XX RN [1] RP 1-2014 RA Lee D.R.; RT ; RL Submitted (10-APR-1990) to the INSDC. RL D.R. Lee, UNIVERSITY OF MISSOURI-COLUMBIA, DEPARTMENT OF MOLECULAR RL MICROBIOLOGY &, IMMUNOLOGY, M642 MEDICAL SCIENCE BUILDING, COLUMBIA, RL MISSOURI 65212, USA XX RN [2] RX DOI; 10.1016/S0165-2478(97)00101-6. RX PUBMED; 9373213. RA Fukuoka M., Tokushima M., Koarada S., Sai T., Miyake K., Kimoto M.; RT "Analysis of Vbeta4 T cell receptor CDR3 repertoire in BALB/c and (NZB x RT NZW)F1 mice"; RL Immunol. Lett. 59(2):63-69(1997). XX RN [3] RX PUBMED; 8645581. RA Okamoto S., Yoshikawa K., Obata Y., Shibuya M., Aoki S., Yoshida J., RA Takahashi T.; RT "Monoclonal antibody against the fusion junction of a deletion-mutant RT epidermal growth factor receptor"; RL Br. J. Cancer 73(11):1366-1372(1996). XX DR MD5; bf1390fcbb3de5da61253ab806c7dc61. XX CC IMGT/LIGM-DB annotation level: by annotators CC CC antigen structure: Lq. beta2-microglobulin. CC for 5' region see X14091 or M36950. XX FH Key Location/Qualifiers FH FT GENE <1..2014 FT /partial FT /allele="H2-L*03" FT /chromosome="17" FT /db_xref="taxon:10090" FT /gene="H2-L" FT /haplotype="q" FT /IMGT_note="functional" FT /IMGT_note="partial in 5'" FT /mol_type="genomic DNA" FT /organism="Mus musculus" FT /strain="AKM" FT INTRON 1..504 FT ACCEPTOR-SPLICE 502..506 FT EX4 505..780 FT /codon_start=3 FT /translation="SPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEEL FT TQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW" FT C-LIKE <505..779 FT /partial FT /codon_start=3 FT /translation="SPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEEL FT TQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW" FT DONOR-SPLICE 780..782 FT INTRON 781..907 FT ACCEPTOR-SPLICE 905..907 FT EX5 908..1024 FT /codon_start=3 FT /translation="PPPSTDSYMVIVAVLGVLGAMAIIGAVVAFVMKRRRNT" FT DONOR-SPLICE 1024..1026 FT INTRON 1025..1202 FT ACCEPTOR-SPLICE 1200..1204 FT EX6 1203..1235 FT /codon_start=3 FT /translation="GKGGDYALAP" FT DONOR-SPLICE 1235..1237 FT INTRON 1236..1408 FT ACCEPTOR-SPLICE 1406..1410 FT EX7 1409..1447 FT /codon_start=3 FT /translation="SQSSEMSLRDCK" FT DONOR-SPLICE 1447..1449 FT INTRON 1448..1586 FT ACCEPTOR-SPLICE 1584..1588 FT EX8 1587..1588 FT /codon_start=3 FT CONNECTING-REGION 780..933 FT TRANSMEMBRANE-REGION934..1586 FT CYTOPLASMIC-REGION 1024..1588 FT STOP-CODON 1589..1591 FT 3'UTR 1589..2014 XX SQ Sequence 2014 BP; 447 A; 485 C; 522 G; 560 T; 0 other; ggatcctgtg tgacacacct gtaccttgtc ctccagagtc aggggcaggg agtcattttc 60 tctggctaca gactttgtga tggctgttca ctcggactga cagttaacgt tggtcagcaa 120 gatgaccaca gtggttgagt ctcagtggtg ggacccttcc agtagcatat gcccctaatt 180 ttgatatgaa ctcaaacaga tattaaatta cttattttcc attccctatt ccattctgtg 240 actatctctc tcatgctatt gaacatcaca taaggatggc catgttcacc cactggctca 300 tgtggattcc ctcttagctt ctttgtccca aaagaaaatg tgcagtcctg tgctgagggg 360 accagctctg cttttggtca ctagtgcaat gacagtgtag tgtcaaatag acacatagtt 420 cactctcatc attgatttaa ctgagtcttg tgtagatttc agtttgtctt gttaattgtg 480 gaatttctta aatcttccac acagattccc caaaggcaca tgtgacccat caccccagat 540 ctaaaggtga agtcaccctg aggtgctggg ccctgggctt ctaccctgct gacatcaccc 600 tgacctggca gttgaatggg gaggagctga cccaggacat ggagcttgtg gagaccaggc 660 ctgcagggga tggaaccttc cagaagtggg catctgtggt ggtgcctctt gggaaggagc 720 agaattacac atgccgtgtg taccatgagg ggctgcctga gcccctcacc ctgagatggg 780 gtaaggaggg tgtgggtgca gagctggggt cagggaaagc tggagccttc tgcagaccct 840 gagctggtca gggatgagag ctggggtcat aaccctcacc ttcatttcct gtacctgtcc 900 ttcccagagc ctcctccgtc cactgactct tacatggtga tcgttgctgt tctgggtgtc 960 cttggagcta tggccatcat tggagctgtg gtggcttttg tgatgaagag aaggagaaac 1020 acaggtaaga aagggcaggg tctgagtttt ctctcagcct cctttagaag tgtgctctgc 1080 tcattaatgg ggaacacagc cacaccccac attgctactg tctctaactg ggtctgctgt 1140 cagttctggg aatttccagt gtcaagatct tccttgaact ctcacagctt ttcttttcac 1200 aggtggaaaa ggaggggact atgctctggc tccaggttag tgtggggaca ggattgttct 1260 gggggacatt ggagtgaagt tggagatgat gggagctctg ggaatccata atagctcctc 1320 cagagaaatc ttctaggggc ctgagttgtg ccatgaagtg aatacattca tgtacatatg 1380 catatacatt tgttttgttt taccctaggc tcccagagct ctgaaatgtc tctccgagat 1440 tgtaaaggtg acactctagg gtctgattgg ggaggggcaa tgtggacatg attgggtttc 1500 agggactccc agaatctcct gagagtgagt ggtgggttgc tggaatgttg tcttcacagt 1560 gatggttcat gactctcatt ctctagcgtg aagacagctg cctggactgt actgagtgac 1620 agacgatgtg ttcaggtctc tcctgtgaca tccagagccc tcagttctct ttacacaaca 1680 ttgtctgatg ttccctgtga gcttgggttc agtgtgaaga actgtggagc ccagcctgcc 1740 ctgcacacca ggaccctatc cctgcactgc cctgtgttcc cttccatagc caaccttgct 1800 gctccagtca aacactgggg gacatctgca tcctgtaagc tccatgctac cctgagctgc 1860 agctcctcac ttccacactg agaataataa tttgaatgtg ggtggctgga gagatggctc 1920 agcgctgact gctcttccaa aggtcctgag ttcaaatccc agcaaccaca tggtggctca 1980 caaccatctg taatggtatc taacaccctc ttct 2014 //