Dbfetch
ID V00752; SV 1; linear; gDNA; STD; MUS; 2570 BP. XX AC V00752; XX DT 13-SEP-2012 (Rel. 201237-4, arrived in LIGM-DB) DT 09-OCT-2019 (Rel. 201941-3, Last updated, Version 6) XX DE Mouse gene for the histocompatibility antigen gene H-2Ld. XX KW antigen receptor; RPI-MH1Like; RPI-MH1Like-Alpha; KW Major histocompatibility superfamily (MhSF); conventional-with-leader; KW regular; gDNA; undefined; functional. XX OS Mus musculus (house mouse) OC cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; OC Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; OC Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; OC Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Glires; OC Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus. XX RN [1] RP 1-2570 RX DOI; 10.1073/pnas.79.6.1994. RX PUBMED; 6952248. RA Evans G.A., Margulies D.H., Camerini-Otero R.D., Ozato K., Seidman J.G.; RT "Structure and expression of a mouse major histocompatibility antigen gene, RT H-2Ld"; RL Proc. Natl. Acad. Sci. U.S.A. 79(6):1994-1998(1982). XX DR MD5; fe09e4b802f40b26203d4eb6b333c40c. XX CC IMGT/LIGM-DB annotation level: by annotators XX FH Key Location/Qualifiers FH FT GENE 1..>2570 FT /partial FT /allele="H2-L*05" FT /chromosome="17" FT /db_xref="taxon:10090" FT /gene="H2-L" FT /haplotype="d" FT /IMGT_note="functional" FT /IMGT_note="incomplete exon 5 sequence (serie of "N")" FT /IMGT_note="partial in 3'" FT /mol_type="genomic DNA" FT /organism="Mus musculus" FT 5'UTR 1..18 FT INIT-CODON 19..21 FT /translation="M" FT EX1 19..79 FT /translation="MAPRTLLLLLAAAWPDSDPR" FT /IMGT_note="57^58>del" FT /IMGT_note="62^63>del" FT /IMGT_note="77^78>del" FT L-REGION 19..78 FT /translation="MAPRTLLLLLAAAWPDSDPR" FT /IMGT_note="57^58>del" FT /IMGT_note="62^63>del" FT /IMGT_note="77^78>del" FT DONOR-SPLICE 79..81 FT INTRON 80..257 FT ACCEPTOR-SPLICE 255..259 FT EX2 258..527 FT /codon_start=3 FT /translation="PHSMRYFETAVSRPGLGEPRYISVGYVDNKEFVRFDSDAEN FT PRYEPQAPWMEQEGPEYWERITQIAKGQEQWFRVNLRTLLGYYNQSAG" FT G-ALPHA1 79..526 FT DONOR-SPLICE 527..529 FT INTRON 528..707 FT ACCEPTOR-SPLICE 705..709 FT EX3 708..983 FT /codon_start=3 FT /translation="THTLQWMYGCDVGSDGRLLRGYEQFAYDGRDYIALNEDLKT FT WTAADMAAQITRRKWEQAGAAEYYRAYLEGECVEWLHRYLKNGNATLLRT" FT G-ALPHA2 527..982 FT DONOR-SPLICE 983..985 FT INTRON 984..1940 FT ACCEPTOR-SPLICE 1938..1942 FT EX4 1941..2216 FT /codon_start=3 FT /translation="SPKAHVTHHPRSKGEVTLRCWALGFYPADITLTWQLNGEEL FT TQDMELVETRPAGDGTFQKWASVVVPLGKEQNYTCRVYHEGLPHPLTLRW" FT C-LIKE 983..2215 FT DONOR-SPLICE 2216..2218 FT INTRON 2217..2345 FT ACCEPTOR-SPLICE 2343..2347 FT EX5 2346..2380 FT /codon_start=3 FT /translation="PPPSTDSYMVI" FT /IMGT_note="incomplete exon sequence (serie of "N")" FT DONOR-SPLICE 2380..2382 FT INTRON 2381..2570 FT CONNECTING-REGION 2216..2371 FT /translation="GKEGVGAELGSGKAGGLLQTLRLVRDESWGHNPHLHFLYLS FT FPEPPPSTDSY" FT TRANSMEMBRANE-REGION2372..>2380 FT /partial FT /translation="MVI" FT /AA_IMGT="incomplete exon sequence (serie of "N")" XX SQ Sequence 2570 BP; 505 A; 707 C; 767 G; 539 T; 52 other; ggatcccaga tgggggcgat ggctccgcgc acgctgctcc tgctgctggc ggccgcctgg 60 cccgactcag acccgcgggg tgagtggggt cggagaggga aacggcctct gccggggaga 120 ggggcggcag gggaagcgtc cgggtcgcca accggaccct ccgccccttg tccacctgaa 180 gccccctgcc cagatcccgc tcgcctggcc agccgcccgg gtttgtaagt cgggtctcac 240 gcgcgcgcgc cccccaggcc cacactcgat gcggtatttc gagaccgcgg tgtcgcggcc 300 gggcctcggg gagccccggt acatctctgt cggctatgtg gacaacaagg agttcgtgcg 360 cttcgacagc gacgcggaga atccgagata tgagccgcag gcgccgtgga tggagcagga 420 ggggccggag tattgggagc ggatcacgca gatcgccaag ggccaggagc agtggttccg 480 agtgaacctg aggaccctgc tcggctacta caaccagagc gcgggcggtg agtgaccccg 540 cgtcggaggt cagcccctcc atttcccgac acagggacgt gacgtgcgtc ccaagtccga 600 ggttcggaac agaacggacc cggaaccgtt tccctttcag tttggaggag tcgcggccgg 660 gcggccgggg ccggggccgg gtaccggggc tgaccggggt cccgcaggca ctcacacact 720 ccagtggatg tacggctgtg acgtggggtc ggacgggcgc ctcctccgcg ggtacgagca 780 gttcgcctac gacggccgtg attacatcgc cctgaacgaa gacctgaaaa cgtggacggc 840 ggcggacatg gcggcgcaga tcacccgacg caagtgggag caggctggtg ctgcagagta 900 ttacagggcc tacctggagg gcgagtgcgt ggagtggctc cacagatacc tgaagaacgg 960 gaacgcgacg ctgctgcgca caggtgcagg ggccgcgggc agcctcctcc ctctcgcctc 1020 gggctggggg ctcagtcctg gggaagaaga aaccctcagc tggggtgatg ccctgtctca 1080 gagggagaga gtgaccctgg gtctcctgat gcctcagcac agtgactgca ctgactctcc 1140 aggctcatct ccctggacat ggcccagcct gtctagagga aggagagaat ttccctgagg 1200 taacaacagc tgctcccttc agttcccctg tagcctctgt cagccagtcc tctcccaggc 1260 cgggttctct gcccacgcca ctgtcggtga cactgactcc tgtcctggct gagtgtgtca 1320 gcccttacac ctcaggaccg gaagtcgcct tacctgattg gaaacatgga ctcctataca 1380 ctagcctggt tgccccagct tctagaactt tccagagaat acattctccc agatcnnnnn 1440 nnnnnnnnnn nnnnnggatc ctgtgtgaca cacctgtgcc ttgtcctcca gagtcagggg 1500 cagggaattt tctctggcta cagactttgt gatggctgtt cactcggact gacagttaac 1560 gttggtcagc aagatgacca cagtggttga gtctcagttg gtgggaccct tccagtagca 1620 tatgccccaa ttttgatatg aactccaaac agatatttaa attacttatt ttccattcct 1680 atttcattct tggacaccct acgcatgaac tcacataaga tgcatgtcac cactgctact 1740 agtgattccc tcttagcttc ttgtcccaaa agaaaatgtg cagtcctgtg ctgaggggac 1800 agctctgctt ttggtcacta gtgcaatgac agtgtagtgt caaatagaca catagttcac 1860 tctatcattg atttaactga gtcttgtgta gatttcagtt tgtcttgtta attgtggaat 1920 ttcttaaatc ttccacacag attccccaaa ggcacatgtg acccatcacc ccagatctaa 1980 aggtgaagtc accctgaggt gctgggccct gggcttttac cctgctgaca tcaccctgac 2040 ctggcagttg aatggggagg agctgaccca ggacatggag cttgtggaga ccaggcctgc 2100 aggggatgga accttccaga agtgggcatc tgtggtggtg cctcttggga aggagcagaa 2160 ttacacatgc cgtgtgtacc atgaggggct gccccatccc ctcaccctga gatggggtaa 2220 ggagggtgtg ggtgcagagc tggggtcagg gaaagctgga ggccttctgc agaccctgag 2280 gctggtcagg gatgagagct ggggtcataa ccctcacctt catttcctgt acctgtcctt 2340 cccagagcct cctccgtcca ctgactctta catggtgatc nnnnnnnnnn nnnnnnnnnn 2400 nnnnnnnnnn nngatcttcc tagaattatt cacacttttc tttttcacag gtggaaaagg 2460 aggggactat gctctggctc caggttagtg tggggacagg attgtctggg ggacattgga 2520 gtgaagttgg agatgatggg agctctggga attccataat agctcagaga 2570 //