Dbfetch
ID HLA00163; SV 5; standard; DNA; HUM; 3854 BP. XX AC HLA00163; XX SV HLA00163.5 XX DT 07-DEC-1998 (Rel. 1.03.0, Created, Version 1) DT 11-OCT-2021 (Rel. 3.46.0, Last Updated, Version 5) XX DE HLA-B*15:01:01:02N, Human MHC Class I sequence XX KW Human MHC; HLA; Class I; HLA-B; Allele; HLA-B*15:01:01:02N; XX OS Homo Sapiens (human) OC Eukaryota; Metazoa; Chordata; Vertebrata; Mammalia; Eutheria; Primates; OC Catarrhini; Hominidae; Homo. XX CC -------------------------------------------------------------------------- CC IPD-IMGT/HLA Release Version 3.60.0 CC -------------------------------------------------------------------------- CC Copyrighted by the IPD-IMGT/HLA Database, Distributed under the Creative CC Commons Attribution-NoDerivs License, see; CC http://www.ebi.ac.uk/ipd/imgt/hla/licence/ for further details. CC -------------------------------------------------------------------------- CC The sequence below is the official allele sequence as approved by the CC WHO Nomenclature Committee for Factors of the HLA System. CC Any cross references may differ from the sequence shown below. CC -------------------------------------------------------------------------- XX RN [1] RP 1-3854 RX PUBMED; 10203017. RA Curran MD, Williams F, Little AM, Rima BK, Madrigal JA, Middleton D; RT "Aberrant splicing of intron 1 creates a novel null HLA-B*1501 allele."; RL Tissue Antigens 53:244-252(1999). XX DR EMBL; AJ250917; AJ250917.1. DR EMBL; AM048844; AM048844.1. DR EMBL; LT575606; LT575606.1. DR EMBL; MN867806; MN867806.1. DR EMBL; OU253528; OU253528.1. DR EMBL; OU253541; OU253541.1. DR EMBL; Y17110; Y17110.1. XX FH Key Location/Qualifiers FH FT source 1..3854 FT /organism="Homo sapiens" FT /mol_type="genomic DNA" FT /db_xref="taxon:9606" FT /ethnic="European, Undefined" FT /cell_line="29139" FT /cell_line="BEL-13-JA" FT /cell_line="DKMS-LSL_ID18210724" FT /cell_line="DKMS-LSL_ID18267113" FT /cell_line="HG00026513" FT CDS join(285..476,477..746,992..1267,1843..2118,2223..2339, FT 2781..2813,2920..2963) FT /codon_start=1 FT /gene="HLA-B" FT /allele="HLA-B*15:01:01:02N" FT /product="MHC Class I HLA-B*15:01:01:02N sequence" FT /translation="MRVTAPRTVLLLLSGALALTETWAGECGVGREMASVGRSEGTAGG FT GAGPGEPRREEGRAPPRPQAPTPX" FT UTR 1..284 FT exon 285..476 FT /number="1" FT exon 477..746 FT /number="2" FT intron 747..991 FT /number="2" FT exon 992..1267 FT /number="3" FT intron 1268..1842 FT /number="3" FT exon 1843..2118 FT /number="4" FT intron 2119..2222 FT /number="4" FT exon 2223..2339 FT /number="5" FT intron 2340..2780 FT /number="5" FT exon 2781..2813 FT /number="6" FT intron 2814..2919 FT /number="6" FT exon 2920..2963 FT /number="7" FT UTR 2964..3854 SQ Sequence 3854 BP; 727 A; 1087 C; 1182 G; 858 T; 0 other; gatcaggacg aagtcccagg tcccggacgg ggctctcagg gtctcaggct ccgagagcct 60 tgtctgcatt ggggaggcgc agcgttgggg attccccact cccacgagtt tcacttcttc 120 tcccaaccta tgtcgggtcc ttcttccagg atactcgtga cgcgtcccca tttcccactc 180 ccattgggtg tcgggtgtct agagaagcca atcagtgtcg ccggggtccc agttctaaag 240 tccccacgca cccacccgga ctcaaaatct cctcagacgc cgagatgcgg gtcacggcgc 300 cccgaaccgt cctcctgctg ctctcgggag ccctggccct gaccgagacc tgggccggtg 360 agtgcggggt cggcagggaa atggcctctg tggggaggag cgaggggacc gcaggcgggg 420 gcgcaggacc cggggagccg cgccgggagg agggtcgggc ccctcctcgc ccccaggctc 480 ccactccatg aggtatttct acaccgccat gtcccggccc ggccgcgggg agccccgctt 540 catcgcagtg ggctacgtgg acgacaccca gttcgtgagg ttcgacagcg acgccgcgag 600 tccgaggatg gcgccccggg cgccatggat agagcaggag gggccggagt attgggaccg 660 ggagacacag atctccaaga ccaacacaca gacttaccga gagagcctgc ggaacctgcg 720 cggctactac aaccagagcg aggccggtga gtgaccccgg cctggggcgc aggtcacgac 780 tccccatccc ccacgtacgg cccgggtcgc cccgagtctc cgggtccgag atccgccccc 840 ctgaggccgc gggacccgcc caaaccctcg accggcgaga gccccaggcg cgtttacccg 900 gtttcatttt cagttgaggc caaaatcccc gcgggttggt cggggcgggg cggggctcgg 960 gggacggggc tgaccgcggg gcctgggcca gggtctcaca ccctccagag gatgtacggc 1020 tgcgacgtgg ggccggacgg gcgcctcctc cgcgggcatg accagtccgc ctacgacggc 1080 aaggattaca tcgccctgaa cgaggacctg agctcctgga ccgcggcgga cacggcggct 1140 cagatcaccc agcgcaagtg ggaggcggcc cgtgaggcgg agcagtggag agcctacctg 1200 gagggcctgt gcgtggagtg gctccgcaga tacctggaga acgggaagga gacgctgcag 1260 cgcgcgggta ccaggggcag tggggagcct tccccatctc ctataggtcg ccggggatgg 1320 cctcccacga gaagaggagg aaaatgggat cagcgctaga atgtcgccct cccttgaatg 1380 gagaatggca tgagttttcc tgagtttcct ctgagggccc cctcttctct ctaggacaat 1440 taagggatga cgtctctgag gaaatggagg ggaagacagt ccctaggata gtgatcaggg 1500 gtcccctttg acccctgcag cagccttggg aaccgtgact tttcctctca ggccttgttc 1560 tctgcctcac actcagtgtg tttggggctc tgattccagc acttctgagt cactttacct 1620 ccactcagat caggagcaga agtccctgtt ccccgctcag agactcgaac tttccaatga 1680 ataggagatt atcccaggtg cctgcgtcca ggctggtgtc tgggttctgt gccccttccc 1740 caccccaggt gtcctgtcca ttctcaggct ggtcacatgg gtggtcctag ggtgtcccat 1800 gagagatgca aagcgcctga attttctgac tcttcccatc agacccccca aagacacatg 1860 tgacccacca ccccatctct gaccatgagg ccaccctgag gtgctgggcc ctgggcttct 1920 accctgcgga gatcacactg acctggcagc gggatggcga ggaccaaact caggacaccg 1980 agcttgtgga gaccagacca gcaggagata gaaccttcca gaagtgggca gctgtggtgg 2040 tgccttctgg agaagagcag agatacacat gccatgtaca gcatgagggg ctgccgaagc 2100 ccctcaccct gagatggggt aaggaggggg atgaggggtc atatctgttc tcagggaaag 2160 caggagccct tctggagccc ttcagcaggg tcagggcccc tcatcttccc ctcctttccc 2220 agagccatct tcccagtcca ccatccccat cgtgggcatt gttgctggcc tggctgtcct 2280 agcagttgtg gtcatcggag ctgtggtcgc tactgtgatg tgtaggagga agagctcagg 2340 tagggaaggg gtgaggggtg gggtctgggt tttcttgtcc cactgggggt ttcaagcccc 2400 aggtagaagt gttccctgcc tcattactgg gaagcagcat ccacacaggg gctaacgcag 2460 cctgggaccc tgtgtgccag cacttactct tttgtgcagc acatgtgaca atgaaggaca 2520 gatgtatcgc cttgatggtt gtggtgttgg ggtcctgatt ccagcattca tgagtcaggg 2580 gaaggtccct gctaaggaca gaccttagga gggcagttgg tccaggaccc acacttgctt 2640 tcctcgtgtt tcctgatcct gccctgggtc tgtagtcata cttctggaaa ttccttttgg 2700 ttccaagacg aggaggttcc tctaagatct catggtcctg cttcctccca gtcccctcac 2760 aggacatttt cttcccacag gtggaaaagg agggagctac tctcaggctg cgtgtaagtg 2820 gtgggggtgg gagtgtggag gagctcaccc accccataat tcctcctgtc ccacgtctcc 2880 tgcgggctct gaccaggtcc tgtttttgtt ctactccagc cagcgacagt gcccagggct 2940 ctgatgtgtc tctcacagct tgaaaaggtg agattcttgg ggtctagagt gggtggggtg 3000 gcgggtctgg gggtgggtgg ggcagtgggg aaaggcctgg gtaatggaga ttctttgatt 3060 gggatgtttc gcgtgtgtcg tgggctgttc agagtgtcat cacttaccat gactaaccag 3120 aatttgttca tgactgttgt tttctgtagc ctgagacagc tgtcttgtga gggaccgaga 3180 tgcaggattt cttcacgcct cccctttgtg acttcaagag cctctggcat ctctttctgc 3240 aaaggcacct gaatgtgtct gcgtccctgt tagcataatg tgaggaggtg gagagacagc 3300 ccacccttgt gtccactgtg acccctgttc ccatgctgat ctgtgtttcc tccccagtca 3360 tctttcttgt tccagagagg tggggctgga tgtctccatc tctgtctcaa ctttatgtgc 3420 actgagctgc aacttcttac ttccctactg aaaataagaa tctgaatata aatttgtttt 3480 ctcaaatatt tgctatgaga ggttgatgga ttaattaaat aagtcaattc ctggaatttg 3540 aaagagcaaa taaagacctg agaaccttcc agaatctgca tgttcgctgt gctgagtctg 3600 ttgcaggtgg ggtgtggaga aggctgtggg gggccgagtg tggatggggc ctgtgcccat 3660 ttggtgttga gtccatcatg ggctttatgt ggttagtcgt cagctgggtc accttcactg 3720 ctccattgtc cttgtccctt cagtggaaac ttgtccagtg ggagctgtga ccacagaggc 3780 tcacacatcg cccagggtgg cccctgcaca cgggggtctc tgtgcattct gagacaaatt 3840 ttcagagcca ttca 3854 //