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GO:0031640 killing of cells of other organism

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Term Information

ID GO:0031640
Name killing of cells of other organism
Ontology Biological Process
Definition Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
Secondary IDs GO:0001908
GONUTS GO:0031640 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
exact killing of cells of another organism
narrow killing of cells of another, non-host, organism

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Annotating gene products that interact with other organisms Link

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_pir456

Cross-references

Database ID
InterPro IPR028130
InterPro IPR033797
UniProtKB-KW Fungicide

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0031640:
Relationship To GO:0031640 Child Term Child Term Name
Is a GO:0051715 cytolysis in other organism
Is a GO:0051883 killing of cells in other organism involved in symbiotic interaction
Regulates GO:0051709 regulation of killing of cells of other organism
Negatively regulates GO:0051711 negative regulation of killing of cells of other organism
Positively regulates GO:0051712 positive regulation of killing of cells of other organism

Protein Annotation

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Qualifier
GO Identifier
GO Term Name
Aspect
Original GO ID
Original GO Term Name
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Date
Assigned By
Product Form ID
Name
Synonym
Type
Taxon Name
Sequence

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dictyBase dictyBase
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EMBL EMBL Nucleotide Sequence Database
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ENSEMBL_ProteinID Ensembl database of automatically annotated genomic data
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ZFIN Zebrafish Information Network

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ARUK-UCL The set of Alzheimer's Disease relevant proteins being prioritised for annotation by the Alzheimer's Disease Gene Ontology Annotation Initiative located at University College London http://www.ucl.ac.uk/functional-gene-annotation/neurological
BHF-UCL The set of Cardiovascular-associated proteins being prioritised for annotation by the Cardiovascular Gene Ontology Annotation Initiative located at University College London http://www.ucl.ac.uk/cardiovasculargeneontology
Exosome The set of exosomal human proteins being prioritised for comprehensive annotation by the UniProt curators at the EBI http://www.ebi.ac.uk/GOA/exosome
KRUK The set of proteins associated with renal processes being prioritised for annotation by the EBI's Renal Gene Ontology Annotation Initiative http://www.ebi.ac.uk/GOA/kidney
ParkinsonsUK-UCL The set of Parkinson's Disease relevant proteins being prioritised for annotation by the Parkinson's Disease Gene Ontology Annotation Initiative located at University College London http://www.ucl.ac.uk/functional-gene-annotation/neurological
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1117 Cyanobacteria

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contributes_to An individual protein that is part of a complex can be annotated to terms that describe the action of the complex. This qualifier allows us to distinguish individual subunit from complex functions e.g. This protein contributes_to 'ribosome binding' when part of a complex but does not perform this function on its own.
NOT|colocalizes_with NOT|colocalizes_with
NOT|contributes_to NOT|contributes_to
colocalizes_with Proteins that are transiently or peripherally associated with an organelle or complex may be annotated to the relevant cellular component term, using the 'colocalizes_with' qualifier.
NOT Used to make an explicit note that the protein is not associated with the GO term e.g. This protein does NOT have 'kinase activity' as expected, disrupted/missing ATP binding domain.
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GO:0031640 killing of cells of other organism

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GO_REF:0000037 UniProt Keywords2GO (UniProtKB/Swiss-Prot entries)
GO_REF:0000038 UniProt Keywords2GO (UniProtKB/TrEMBL entries)
GO_REF:0000039 UniProt Subcellular Location2GO (UniProtKB/Swiss-Prot entries)
GO_REF:0000040 UniProt Subcellular Location2GO (UniProtKB/TrEMBL entries)
GO_REF:0000041 UniPathway2GO
GO_REF:0000042 InterPro2GO (conservatively modified by UniProt)
GO_REF:0000045 UniProt Keywords2GO (UniProtKB/TrEMBL entries, conservatively modified by UniProt)
GO_REF:0000046 UniProt Subcellular Location2GO (UniProtKB/TrEMBL entries, conservatively modified by UniProt)
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IMP,IGI,IPI,IDA,IEP,EXP,ISS,TAS,NAS,ND,IC,RCA,IBA,IBD,IKR,IRD,ISA,ISM,ISO,IGC Manual All
IMP Inferred from Mutant Phenotype
IGI Inferred from Genetic Interaction
IPI Inferred from Physical Interaction
IGC Inferred from Genomic Context
ISS Inferred from Sequence or Structural Similarity
IDA Inferred from Direct Assay
IEP Inferred from Expression Pattern
IEA Inferred from Electronic Annotation
TAS Traceable Author Statement
NAS Non-traceable Author Statement
ND No biological Data available
IC Inferred by Curator
RCA Reviewed Computational Annotation
ISA Inferred from Sequence Alignment
EXP Inferred from EXPeriment
IBA Inferred from Biological aspect of Ancestor
IBD Inferred from Biological aspect of Descendant
IKR Inferred from Key Residues
IRD Inferred from Rapid Divergence
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AGI_LocusCode:* Arabidopsis Genome Initiative
AspGD:* Aspergillus Genome Database
CGD:* Candida Genome Database
CHEBI:* Chemical Entities of Biological Interest
dictyBase:* dictyBase
EC:* Enzyme Commission
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ECK:* EcoGene Database of Escherichia coli Sequence and Function
ECOGENE:* EcoGene Database of Escherichia coli Sequence and Function
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Pfam:* Pfam database of protein families
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protein_id:* DDBJ / ENA / GenBank
PubChem_Compound:* NCBI PubChem database of chemical structures
PubChem_Substance:* NCBI PubChem database of chemical substances
RefSeq:* RefSeq
RGD:* Rat Genome Database
RGDID:* Rat Genome Database
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SGD:* Saccharomyces Genome Database
TAIR:* The Arabidopsis Information Resource
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UniPathway:* UniPathway
UniProt:* Universal Protein Knowledgebase
UniProtKB:* Universal Protein Knowledgebase
UniProtKB-KW:* UniProt Knowledgebase keywords
UniProtKB-SubCell:* UniProt Knowledgebase Subcellular Location vocabulary
UniRule:* Manually curated rules for automatic annotation of UniProtKB unreviewed entries
WB:* WormBase database of nematode biology
WormBase:* WormBase database of nematode biology
ZFIN:* Zebrafish Information Network

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AgBase AgBase resource for functional analysis of agricultural plant and animal gene products
Alzheimers_University_of_Toronto Alzheimers Project at University of Toronto
ARUK-UCL Alzheimers Research Gene Ontology Initiative
AspGD Aspergillus Genome Database
BHF-UCL Cardiovascular Gene Ontology Annotation Initiative
CACAO Community Assessment of Community Annotation with Ontologies
CAFA Critical Assessment of Protein Function Annotation
CGD Candida Genome Database
CollecTF Database of transcription factor binding sites (TFBS) in the Bacteria domain
DFLAT Developmental FunctionaL Annotation at Tufts
dictyBase dictyBase
EcoCyc Encyclopedia of E. coli metabolism
EcoliWiki EcoliWiki from EcoliHub
Ensembl Ensembl database of automatically annotated genomic data
EnsemblFungi Ensembl Fungi, the Ensembl database for accessing genome-scale data from fungi.
EnsemblMetazoa Ensembl Metazoa, the Ensembl database for accessing genome-scale data from non-vertebrate metazoa.
EnsemblPlants Ensembl Plants, the Ensembl database for accessing genome-scale data from plants.
EnsemblProtists Ensembl Protists, the Ensembl database for accessing genome-scale data from protists.
FlyBase FlyBase
GDB Human Genome Database
GeneDB GeneDB
GOC Gene Ontology Consortium
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GO_Central GO Central
GR Gramene
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HPA Human Protein Atlas tissue profile information
IntAct IntAct protein interaction database
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JCVI J. Craig Venter Institute
LIFEdb LifeDB
MENGO Microbial ENergy processes Gene Ontology Project
MGI Mouse Genome Informatics
MTBBASE Collection and Refinement of Physiological Data on Mycobacterium tuberculosis
NTNU_SB Norwegian University of Science and Technology, Systems Biology team
PAMGO_GAT Genome Annotation Tool (Agrobacterium tumefaciens C58); PAMGO Interest Group
PAMGO_MGG Magnaporthe grisea database
ParkinsonsUK-UCL Parkinsons Disease Gene Ontology Initiative
PINC Proteome Inc.
PomBase PomBase
PseudoCAP Pseudomonas Genome Project
Reactome Reactome - a curated knowledgebase of biological pathways
RGD Rat Genome Database
Roslin_Institute Roslin Institute
SGD Saccharomyces Genome Database
SynGO The Synapse Gene Ontology and Annotation Initiative
SynGO-UCL The Synapse Gene Ontology and Annotation Initiative at UCL
SYSCILIA_CCNET Syscilia
TAIR The Arabidopsis Information Resource
TIGR J. Craig Venter Institute
UniProt Universal Protein Knowledgebase
WormBase WormBase database of nematode biology
ZFIN Zebrafish Information Network

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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0031640. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0031640 based on the entire annotation set Co-occurrence statistics for GO:0031640 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_pir
2012-07-13 Deleted RELATION is a GO:0035821 (modification of morphology or physiology of other organism)
2012-07-13 Added RELATION is a GO:0044364 (disruption of cells of other organism)
2012-04-28 Deleted RELATION is a GO:0051704 (multi-organism process)
2012-04-28 Added RELATION is a GO:0035821 (modification of morphology or physiology of other organism)
2011-02-15 Added SYNONYM killing of cells of another organism
2011-02-15 Updated TERM killing of cells of other organism
2008-06-09 Added SLIM goslim_pir
2008-05-13 Added DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
2008-05-12 Deleted DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
2008-04-01 Updated RELATION is a GO:0001906 (cell killing)
2008-04-01 Updated RELATION is a GO:0051704 (multi-organism process)
2007-08-09 Added SYNONYM killing of cells of another, non-host, organism
2007-08-09 Deleted SYNONYM killing of cells of another, non-host, organism
2005-12-10 Added SECONDARY GO:0001908 (killing of cells of another, non-host, organism)
2005-12-10 Added SYNONYM killing of cells of another, non-host, organism
2005-12-10 Updated TERM killing of cells of another organism
2005-10-08 Added TERM cell killing of cells of other organism
2005-10-08 Added DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

Term

Timestamp Action Category Detail
2011-02-15 Updated TERM killing of cells of other organism
2005-12-10 Updated TERM killing of cells of another organism
2005-10-08 Added TERM cell killing of cells of other organism

Definition/synonyms

Timestamp Action Category Detail
2011-02-15 Added SYNONYM killing of cells of another organism
2008-05-13 Added DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
2008-05-12 Deleted DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.
2007-08-09 Added SYNONYM killing of cells of another, non-host, organism
2007-08-09 Deleted SYNONYM killing of cells of another, non-host, organism
2005-12-10 Added SYNONYM killing of cells of another, non-host, organism
2005-10-08 Added DEFINITION Any process in an organism that results in the killing of cells of another organism, including in some cases the death of the other organism. Killing here refers to the induction of death in one cell by another cell, not cell-autonomous death due to internal or other environmental conditions.

Relationships

Timestamp Action Category Detail
2012-07-13 Deleted RELATION is a GO:0035821 (modification of morphology or physiology of other organism)
2012-07-13 Added RELATION is a GO:0044364 (disruption of cells of other organism)
2012-04-28 Deleted RELATION is a GO:0051704 (multi-organism process)
2012-04-28 Added RELATION is a GO:0035821 (modification of morphology or physiology of other organism)
2008-04-01 Updated RELATION is a GO:0001906 (cell killing)
2008-04-01 Updated RELATION is a GO:0051704 (multi-organism process)

Other

Timestamp Action Category Detail
2013-04-18 Updated SLIM goslim_pir
2008-06-09 Added SLIM goslim_pir
2005-12-10 Added SECONDARY GO:0001908 (killing of cells of another, non-host, organism)
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Hostnameves-pg-ce.ebi.ac.uk
Up since08:03 21/7/2017
Stamp2017-08-01-02-55-29
Version48