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GO:0030246 carbohydrate binding

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Term Information

ID GO:0030246
Name carbohydrate binding
Ontology Molecular Function
Definition Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
Secondary IDs GO:0005529
GONUTS GO:0030246 Wiki Page

Synonyms

Synonyms are alternative words or phrases closely related in meaning to the term name, with indication of the relationship between the name and synonym given by the synonym scope. Click on the icon for more details.
Type Synonym
related selectin
exact sugar binding

Annotation Guidance

Usage of this term is subject to the following annotation guidelines:
Annotation Guidelines
Binding term considerationsLink

GO Slims

This term is present in the following GO Consortium-maintained GO slims:
GO slim nameCount of all terms
goslim_agr58
goslim_metagenomics116
goslim_chembl310
goslim_plant98
goslim_pir456

Cross-Ontology Relations

Relation Other Ontology ID Term
has_input CHEBI CHEBI:16646 carbohydrate

Cross-references

Database ID
InterPro IPR000922
InterPro IPR001079
InterPro IPR001220
InterPro IPR001919
InterPro IPR002102
InterPro IPR003610
InterPro IPR005084
InterPro IPR005310
InterPro IPR005323
InterPro IPR006584
InterPro IPR007324
InterPro IPR008960
InterPro IPR008965
InterPro IPR010502
InterPro IPR011013
InterPro IPR013784
InterPro IPR014718
InterPro IPR015179
InterPro IPR015339
InterPro IPR015364
InterPro IPR016363
InterPro IPR018366
InterPro IPR018909
InterPro IPR019019
InterPro IPR019028
InterPro IPR030638
InterPro IPR030640
InterPro IPR030649
InterPro IPR030652
InterPro IPR030653
InterPro IPR031756
InterPro IPR033563
InterPro IPR033734
UniProtKB-KW Lectin

Replaces

This term can be used instead of these obsolete terms:
GO Identifier GO Term Name Reason
GO:0004895 obsolete cell adhesion receptor activity CONSIDER GO:0030246
GO:0005194 obsolete cell adhesion molecule activity CONSIDER GO:0030246
GO:0005530 obsolete lectin CONSIDER GO:0030246
GO:0008337 obsolete selectin CONSIDER GO:0030246

Ancestor Chart

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Child Terms

This table lists all terms that are direct descendants (child terms) of GO:0030246:
Relationship To GO:0030246 Child Term Child Term Name
Is a GO:0030247 polysaccharide binding
Is a GO:0070492 oligosaccharide binding
Capable of GO:1990724 galectin complex
Is a GO:0048029 monosaccharide binding

Protein Annotation

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ARUK-UCL The set of Alzheimer's Disease relevant proteins being prioritised for annotation by the Alzheimer's Disease Gene Ontology Annotation Initiative located at University College London http://www.ucl.ac.uk/functional-gene-annotation/neurological
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contributes_to An individual protein that is part of a complex can be annotated to terms that describe the action of the complex. This qualifier allows us to distinguish individual subunit from complex functions e.g. This protein contributes_to 'ribosome binding' when part of a complex but does not perform this function on its own.
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colocalizes_with Proteins that are transiently or peripherally associated with an organelle or complex may be annotated to the relevant cellular component term, using the 'colocalizes_with' qualifier.
NOT Used to make an explicit note that the protein is not associated with the GO term e.g. This protein does NOT have 'kinase activity' as expected, disrupted/missing ATP binding domain.
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GO:0030246 carbohydrate binding

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AgBase AgBase resource for functional analysis of agricultural plant and animal gene products
Alzheimers_University_of_Toronto Alzheimers Project at University of Toronto
ARUK-UCL Alzheimers Research Gene Ontology Initiative
AspGD Aspergillus Genome Database
BHF-UCL Cardiovascular Gene Ontology Annotation Initiative
CACAO Community Assessment of Community Annotation with Ontologies
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CGD Candida Genome Database
CollecTF Database of transcription factor binding sites (TFBS) in the Bacteria domain
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MENGO Microbial ENergy processes Gene Ontology Project
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MTBBASE Collection and Refinement of Physiological Data on Mycobacterium tuberculosis
NTNU_SB Norwegian University of Science and Technology, Systems Biology team
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Co-occurring Terms

These tables show the number of times the term listed in the table has been co-annotated with GO:0030246. The terms are listed in descending order of number of times the term has been co-annotated.
The table on the left is calculated using both electronic and manual-evidenced annotations, while the table on the right is calculated using only manual-evidenced annotations.
Co-occurrence statistics for GO:0030246 based on the entire annotation set Co-occurrence statistics for GO:0030246 based on non-IEA annotations only

Change Log

All changes

Timestamp Action Category Detail
2017-03-04 Added SLIM goslim_agr
2016-07-23 Added SLIM goslim_metagenomics
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2012-04-15 Added SECONDARY GO:0005529 (sugar binding)
2012-04-15 Added SYNONYM sugar binding
2012-04-15 Deleted DEFINITION Interacting selectively and non-covalently with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2012-04-15 Added DEFINITION Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
2010-12-05 Deleted SLIM goslim_generic
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-07-03 Deleted DEFINITION Interacting selectively with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-03-15 Added DEFINITION Interacting selectively with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-03-15 Deleted DEFINITION Interacting selectively with any carbohydrate.
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_generic
2008-05-13 Added DEFINITION Interacting selectively with any carbohydrate.
2008-05-12 Deleted DEFINITION Interacting selectively with any carbohydrate.
2008-04-01 Updated RELATION is a GO:0005488 (binding)
2007-09-10 Deleted SYNONYM cell adhesion molecule activity
2007-09-10 Deleted SYNONYM cell adhesion receptor activity
2007-08-09 Added SYNONYM cell adhesion molecule activity
2007-08-09 Added SYNONYM cell adhesion receptor activity
2007-08-09 Added SYNONYM selectin
2007-08-09 Deleted SYNONYM cell adhesion molecule activity
2007-08-09 Deleted SYNONYM cell adhesion receptor activity
2007-08-09 Deleted SYNONYM selectin
2005-08-10 Added SYNONYM cell adhesion molecule activity
2005-08-10 Added SYNONYM cell adhesion receptor activity
2005-08-10 Added SYNONYM selectin
2003-06-10 Updated TERM carbohydrate binding
2003-03-26 Updated DEFINITION Interacting selectively with any carbohydrate.
2003-03-19 Updated TERM carbohydrate binding activity
2002-11-27 Added DEFINITION Interacting selectively and stoichiometrically with any carbohydrate.
2001-09-10 Added TERM carbohydrate binding

Term

Timestamp Action Category Detail
2003-06-10 Updated TERM carbohydrate binding
2003-03-19 Updated TERM carbohydrate binding activity
2001-09-10 Added TERM carbohydrate binding

Definition/synonyms

Timestamp Action Category Detail
2012-04-15 Added SYNONYM sugar binding
2012-04-15 Deleted DEFINITION Interacting selectively and non-covalently with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2012-04-15 Added DEFINITION Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.
2009-07-03 Added DEFINITION Interacting selectively and non-covalently with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-07-03 Deleted DEFINITION Interacting selectively with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-03-15 Added DEFINITION Interacting selectively with any carbohydrate, any of a group of organic compounds based of the general formula Cx(H2O)y.
2009-03-15 Deleted DEFINITION Interacting selectively with any carbohydrate.
2008-05-13 Added DEFINITION Interacting selectively with any carbohydrate.
2008-05-12 Deleted DEFINITION Interacting selectively with any carbohydrate.
2007-09-10 Deleted SYNONYM cell adhesion molecule activity
2007-09-10 Deleted SYNONYM cell adhesion receptor activity
2007-08-09 Added SYNONYM cell adhesion molecule activity
2007-08-09 Added SYNONYM cell adhesion receptor activity
2007-08-09 Added SYNONYM selectin
2007-08-09 Deleted SYNONYM cell adhesion molecule activity
2007-08-09 Deleted SYNONYM cell adhesion receptor activity
2007-08-09 Deleted SYNONYM selectin
2005-08-10 Added SYNONYM cell adhesion molecule activity
2005-08-10 Added SYNONYM cell adhesion receptor activity
2005-08-10 Added SYNONYM selectin
2003-03-26 Updated DEFINITION Interacting selectively with any carbohydrate.
2002-11-27 Added DEFINITION Interacting selectively and stoichiometrically with any carbohydrate.

Relationships

Timestamp Action Category Detail
2008-04-01 Updated RELATION is a GO:0005488 (binding)

Other

Timestamp Action Category Detail
2017-03-04 Added SLIM goslim_agr
2016-07-23 Added SLIM goslim_metagenomics
2015-05-19 Added SLIM goslim_chembl
2015-05-19 Deleted SLIM goslim_ChEMBL
2015-05-11 Added SLIM goslim_ChEMBL
2013-04-18 Updated SLIM goslim_plant
2013-04-18 Updated SLIM goslim_pir
2012-04-15 Added SECONDARY GO:0005529 (sugar binding)
2010-12-05 Deleted SLIM goslim_generic
2008-06-09 Added SLIM goslim_plant
2008-06-09 Added SLIM goslim_pir
2008-06-09 Added SLIM goslim_generic
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14ms
Hostnameves-pg-ce.ebi.ac.uk
Up since08:03 21/7/2017
Stamp2017-08-01-02-55-29
Version48