Glossary
a – b – c – d – e – f – g – h – i – j – k – l – m – n – o – p – q – r – s – t – u – v – w – x – y – z – 0 – 1 – 2 – 3 – 4 – 5 – 6 – 7 – 8 – 9 – .
- .gpr files
-
1
- 1000 genomes project
-
4
- 4DXpress
-
a
- accession number
- Active site
- Affinity purification mass spectrometry
- Affymetrix
-
o
- orthologue
-
a
- Affymetrix arrays
- Affymetrix probe ID
- Alpha helix
- ambiguity code
- Amide
- Amino acid
- Annotation
- ANOVA
- Application programming interface
- ArrayExpress
- ArrayExpress Archive
- arthropod
- Assay
- Atf1
- Automatic annotation
- Average Linkage
-
b
- BAM
- Base pair
- Beta strand
- Binding site
- Bioconductor
- BioMaterial Characteristics
- BioModels Database
- BioPAX
- BioSource (or Sample)
- Biotechnological invention
- BLAST
- BLAT
- BLOSUM matrices
- Boosting terms
- Box plot
-
c
- C-terminus
- Cap Analysis Gene Expression
- Capillary sequencing technology
- CCDS
- CDS
- CellML
- ChEBI
- ChEMBL
- Child term
- Chinese Biological Abstracts
- ChIP-chip
- ChIP-Sequencing
- chordate
- Chromatin immunoprecipitation
- chunked transfer encoding
- cisRED
- Citeseer
- CLUSTAL
- Clustering
- Co-Immunoprecipitation
- Co-occurrence
- Coenzyme
- Cofactor
- Comparative genomic hybridisation
- Complete Linkage
- Computational model
- Computationally infer
- Confidence intervals
- Confocal laser scanner
- Consequence type
- Conservation score
- Conserved site
- Constrained elements
- Contigs
- Controlled vocabulary
- Copy number variations
- Correlation-based distance or Pearson correlation
- Correspondance analysis (COA)
- COSMIC
- CpG islands
- Cross-reference
- CTCF
- curation
- curator
-
d
- DALI
- DAS
- Dasty
- Data class
- data matrices
- data warehouse
- database dumps
- database schema
- DbClustal
- dbSNP
- DECIPHER
- Dendrogram
- Density histogram
- DGVa
- dicots
- dictyBase
- Differentially expressed
- DIGE
- Digital Object Identifier
- disambiguated
- Distance measure
- Distribution plot
- diTag
- DNA probe
- DNase 1
- Domain
- dot plot
-
e
- E-value
- EC number
- EGA
- EMBL format
- EMBL Release
- EMBL-Bank
- EMBL-WGS
- ENCODE
- Ensembl
- Ensembl Compara
- Ensembl Genomes
- Ensembl release
- Entrez Gene
- Entry Version
- Ephb3
- Epistasis
- ESPACE® ACCESS
- EST library
- Euclidean distance
- Europe PubMed Central
- European Nucleotide Archive
- European Patent Office (EPO)
- exon
- Experiment
- Experiment accession number
- Experimental factor
- Experimental Factor Ontology
- Expressed sequence tag
- Extracellular
- Extract
-
f
- FASTA
- FASTQ
- Filtering
- flat files
- FlyBase
- Fragment Ion Spectra
- Functional genomics
- Fuzzy searches
-
g
- gap penalty
- GCRMA
- GENCODE
- gene
- Gene Annotation
- Gene association file
- gene expression
- Gene Expression Atlas
- Gene expression atlas
- Gene expression profile
- Gene ontology
- gene regulation
- Gene tree
- Gene3D
- Genomic assembly
- genomic structural variation
- GERP score
- global alignment
- GlobalPat CD/DVD
- Glycolysis
- GO evidence code
- GO Slim
- GOA
- GPCRs
- GrainGenes
- GVF
- GWAS
-
h
- H-Invitational Database
- HAMAP
- HapMap
- hash table
- Havana
- Heatmap
- HeLa
- Heterosis
- heuristic
- heuristics
- HGMD
- HGNC
- Hidden Markov model
- Hierarchical Clustering
- high throughput sequencing
- High-throughput technologies
- Histone methylation
- hit pairs
- Homology modelling
- HTML
- HUGO
- HUGO names
- HUPO-PSI
- Hybridisation
- Hydrogen Bond
-
i
- iHOP
- IMEx
- IMEx Consortium
- IMGT/HLA
- Implemented Patent Classification (IPC)
- Information extraction
- Information extraction module
- Information retrieval
- IntAct
- IntEnz
- interactome
- intermediate compounds
- International Patent Classification (IPC)
- Interolog
- InterPro
- InterProScan
- Intron
- IPI
- Issue Date
-
j
- JalView
- Jmol
- JPO
-
k
- Kaposi’s Sarcoma
- Karlin-Altschul statistics
-
l
- Labelled extract
- LASTz
- LC-MS
- Leukemia
- Li & Wong
- Ligand
- Linkage Disequilibrium
- Lipid
- local alignment
- Lookup table
- Lucene
-
m
- MACiE
- Macromolecular Structure Database
- MAGE-ML
- MAGE-TAB
- Manual annotation
- manually infer
- MapViewer
- Mass spectrometer output files
- Mass spectrometry
- Medline
- MedlinePlus
- MeSH
- Meta-analytical
- Metabolism
- Metabolomics
- Metadata
- Metagenome
- Metaphase
- Metatranscriptomics
- Metazoa
- Methylation
- MIAME
- MIAMExpress
- Microarray
- MINSEQE
- MIRIAM
- miRNA
- monocot
- Monomer
- morphology
- MSD
- MSDfold
- MView
- MySQL
-
n
- N-terminus
- Named entity recognition (NER)
- Natural language processing
- NCBI Map Viewer
- NCBI Taxonomy
- Needleman-Wunsch algorithm
- Next generation sequencing
- Nfkbia
- NHGRI
- non-chordate
- Normalisation
- Normalisation methods
- Notch Signalling Pathway
-
o
- Octave
- oligo probe
- Oligonucleotide
- OMIM
- One- and two-channel experiments
- Ontology
- Open Access
- Open Biomedical Ontologies
- open reading frame
- Operators
- Optimal alignment
- Oracle
-
p
- p-value
- PAM matrices
- PANTHER
- paralogue
- Partitioning clustering
- Pattern
- PDB
- PDBe
- PDBSum
- Peak list
- Perfect match (PM)
- Perl
- Pfam
- Pharmacogenomics
- Phytopathogen
- PIR-PSD
- PIRSF
- Pleiotropy
- PMID
- Pol 1
- Polymer
- Polymorphism
- position-specific score matrix
- Positive Selection
- Post translational modification
- Pre-processing
- PRIDE
- Primary Accession Number
- Principal Component Analysis (PCA)
- PRINTS
- Probe
- Probe intensity
- Processed data
- Processed identification results
- ProDom
- Profiles
- Promoter elements
- PROSITE
- Prosthetic group
- Protein domain
- Protein family
- Protein Identifier
- Protein repeat
- Protein signature
- Protein/peptide identifications
- Protein–protein interaction
- Proteome
- Proteomics
- Proximity searches
- PSI-BLAST
- PSI-MI ontology
- PSI-MITAB
- PSICQUIC
- PubMed
- Pyrosequencing
-
r
- Ramachandran Plot
- Range searches
- Rasmol
- Raw data
- Reactome
- Reactome Pathway Browser
- Reference sequence
- RefSeq
- regular expression
- Regulatory features
- relational database
- Resequencing
- RESID
- REST
- Rfam
- Rhea
- Rho-independent termination
- RMA
- RMSD
- RNA-Seq
- rRNA
-
s
- Saa4
- SAM
- Sample
- SARA
- SciLab
- SDF
- Search engine output files
- Secondary Accession Number
- Secondary accession number
- SEG filter
- Selected reaction monitoring
- Sequence Read Archive
- Sequence Version
- sequence-based search
- Servlet
- Side chain
- signal transduction
- Single Linkage
- single nucleotide polymorphism
- Small molecules
- SMART
- Smith–Waterman algorithm
- SNPs
- SOAP
- Sonication
- Spinocerebellar ataxia type 1
- SRS
- SSAHA
- Standard deviation
- Standard flowgram format
- Structural Genomics
- Sty1
- Subcellular
- substitution matrix
- Superfamily
- Swiss-Prot
- Synonym
- Synteny
- Systems Biology Graphical Notation
- Systems Biology Markup Language
-
t
- t-test
- Tab2MAGE
- Tandem affinity purification
- Tandem-MS
- Taxonomic divisions
- Text mining
- text-based search
- TIGRFAM
- Tiling arrays
- Toxicogenomics
- Trace Archive
- Transcriptome
- Transcriptomics
- Transformation
- Translation
- tRNA
- tRNA cloverleaf
- TROME database
- Two-hybrid system
-
u
- UCSC genome browser
- UK PubMedCentral
- UniMES
- UniParc
- UniProt
- UniProt Knowledgebase
- UniProt-GOA
- UniProtKB
- UniProtKB/Swiss-Prot
- UniProtKB/TrEMBL
- UniRef
- Uracil
- USPTO
- UTR
-
v
- Validation status
- VCML
- VectorBase
- VEGA
- VISTA enhancer
-
w
- Web Services
- Web Services Description Language
- WormBase
-
x
- X-ray crystallography
- XML
- XPPAUT
-
y
- Yeast two hybrid
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