Exercise

Exercise 1

a) Find documentation for the Exon class in the Ensembl core code base. Which method would you use to retrieve the DNA sequence for an exon? What is the return type for this method?

b) Can you find a table which stores stable ids for transcripts? Which table stores DNA sequence? How many columns does this table have?

 

AnswerMagali explains the answer to this question in this 1 min video. The documentation pages she refers to are at page a, page bi and page bii.