cDNA sequence

The sequence display - cDNA

The cDNA view shows the spliced transcript along the protein sequence (Figure 20).

The sequence display - cDNA
Figure 20. Compare the transcript sequence, coding sequence, and variation in the cDNA view.
Notes[A] The cDNA view shows the transcript sequence in the first row (in blue in the figure), the coding sequence alone (no UTR) in the second row, and the protein sequence in the third row. [B] Codons are shown in alternating yellow highlight and no highlight. [C] Ambiguity codes for variations are above the sequence. Click on one to open the variation tab, explored further on in this course. [D] Amino acids affected by sequence variation are marked in red. Hover over a red amino acid with your mouse to view the alternatives.
How do you access the cDNA sequence? Try our guided example.