This last talk by Matthias is 10 minutes long.
In this talk he examines some of the Velvet extensions available:
- Columbus, which allows you to align reads to a reference sequence.
- Oases, for transcriptome analysis.
- Metavelvet, to separate out and assemble a mixed pot of multiple genomes.
He also discusses some issues related to assembly quality, including:
- Read simulation.
- Testing of different methods in Assemblathon.
- Expected and observed coverage.