EBI Training EBI User Training Programme Hands-on Transcriptomics Downloads

Hands-on training at EBI - Transcriptomics (Downloads)

Course Summary

Title: Transcriptomics
Date: 28-30 January 2008
Venue: Hinxton, Cambridge, UK
Organisers: Gabriella Rustici, Vicky Schneider
Registration Deadline: 6th January 2008

Admin Support: Alison Barker and Janet Copeland

Trainers

David
Croft

Guest Speakers

Nuno L. Barbosa-Morais
Matt Ritchie

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Program Contents

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Time	Downloadable Files
Day 1
	Microarray Data Storage: ArrayExpress Lecture Hands on: ArrayExpress Practical 1 Practical 2
Day 2
	Lecture (quality assessment, pre-processing and experimental design) Lecture Hands on: limma (pre-processing practical) Practical Lecture (assessing differential expression using linear models) Lecture Hands on: limma (continue with pre-processing practical. Start differential expression practical) Practical
Day 3
	Lecture (clustering, classification) Lecture Lecture 2 Practical Hands on: limma (complete differential expression practical) Practical Expression Profiler, lecture/practical Lecture Practical 1 Practical 2 Link to other EBI resources for gene set analysis: Go & REACTOME GOA Lecture GOA Practical REACTOME Lecture REACTOME Practical

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