EMBL-EBI: Transcriptomics Data and Tools

Date:

  Tuesday 14 February 2017

Venue: 

University of Cambridge - Downing Site, Cambridge,  CB2 3AR, United Kingdom

Application opens: 

Friday December 16 2016

Application deadline: 

Monday February 13 2017

Participation: 

First come, first served

Contact: 

Louisa Bellis

Registration fee: 

This course is free to University of Cambridge students, but charges will apply for other participants.

Registration closed

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Course Overview

This workshop will give an introduction to the functional genomics resources provided by EMBL-EBI and hands-on practical experience of searching and accessing appropriate data and information. The session will also cover data submission to ArrayExpress using Annotare, but will not cover the analysis of such data.

Audience

This workshop is for researchers working with functional genomics data, introducing them to resources for submitting and exploring functional gneomic datasets and for exploring pre-analysed datasets. No previous experience of bioinformatics is required, but an undergraduate level understanding of biology would be an advantage.

Modules and resources

During this course you will learn about:

  • Exploring public transcriptomic data: ArrayExpress and Expression Atlas
  • Submitting your own data to Array Express 

Learning outcomes

After this course you should be able to:

  • Explore public datasets within Array Express
  • Submit your data using Annotare
  • Search for expression information using Expression Atlas