APO-SYS Data Management Meeting
This 3 day meeting does involve 3 distinct events:
Data Management Meeting: DL-62 (01-03 June 2011)
The purpose of this meeting is to give an opportunity to APO-SYS partners to gain an understanding of the data management process of the consortium as well as an insight into how this data can be used.
This will involve:
- To illustrate how partners' submitted data fits in the EBI public databases and showcase existing analysis tools
- Organise face-to-face meeting between attendees and representatives of specific EBI resources to facilitate data submission
- To teach how workflow technology (e.g. Taverna) can be used to access data submitted to EBI and draw on the expertise of the attendees to create sample workflows that answer biologically relevant questions
GO Content Meeting for Apoptosis: DL-119 (01 June 2011)
This workshop is going to bring the GO editorial team and a selected number of APO-SYS domain experts together to enhance the representation of Apoptosis in the GO Ontology. Five Apoptosis experts from the consortium will be chosen for their joint ability to express the breadth and depth of the Apoptosis process, while the GO editorial board will help structure and integrate the expert's knowledge into the GO ontology.
Meeting duration: 1 day
APO-SYS Collaborative Meeting (03 June 2011)
This meeting will give an opportunity to review the work which remains to be accomplished until the end of the project and a new occasion for young scientists to meet and start collaborations.
GO Content Meeting
The programme and further information is available on the GO Wiki Page
Data Management Meeting
|
Time |
Topic |
|
Day 1 - Wed 1 June 2011 - Presentation of EBI Submission databases |
|
|
09:00 - 09:30 (15’) |
Coffee + Welcome/Intro (Samuel Kerrien) |
|
09:30 - 10:00 (30’) |
UniProt Knowledge Base (Wei Mun Chan) |
|
10:00 - 11:00 (1h) |
Protein Identifications - PRIDE (Juan Antonio Vizcaíno) |
|
11:00 - 11:20 |
Tea break |
|
11:20 - 12:30 (1h10) |
Distributed Annotation Systems (Rafael Jimenez) |
|
12:30 - 13:30 |
Lunch |
|
13:30 - 15:00 (1h30) |
Molecular Interactions - IntAct (Sandra Orchard) |
|
15:30 - 15:50 |
Tea break |
|
15:50 - 17:20 (1h30) |
Gene Expression - ArrayExpress/Atlas (Emma Hastings) |
|
Day 2 - Thurs 2 June 2011 - Using EBI resources together, Meet the experts |
|
|
09:00 - 10:30 (1h30) |
Pathways - Reactome (Bijay Jassal) |
|
10:30 - 11:00 (1h30) |
Computational Models - BioModels (Lukas Endler) |
|
11:00 - 11:20 |
Tea Break |
|
11:20 - 12:20 |
Computational Models - BioModels (Lukas Endler) |
|
12:20 - 13:20 |
Lunch |
|
13:20 - 15:20 (2h) |
Intro to Workflows / Hands on (Rafael and Samuel) |
|
15:20 - 15:40 |
Tea Break |
|
15:40 - 17:30 (1h50) |
Meet the EBI experts |
|
18:30 - 21:00 |
Meeting Dinner (The Jade Fountain in Sawston) |
Please note that the session 'Meet the Experts' is meant to allow participants to meet with representatives of specific EBI databases, in order to discuss their own data submission of need with respect to using tools demonstrated earlier in the meeting. To make best use of the time allocated, it would be best if participants could bring along any dataset they are willing to submit.
Collaborative Meeting (June 3rd)
|
Time |
Topic |
|
09:00 - 09:10 |
Gabriela Imreh (Partner 1) |
|
09:10 - 09:40 |
Samuel Kerrien/GO representative TBA (Partner 13) |
|
09:40 - 10:00 |
Guy Karlebach (Partner 14) |
|
10:00 - 10:20 |
Marco Corazzari (Partner 4) |
|
10:20 - 10:45 |
Tea Break |
|
10:45 - 11:15 |
Sasker Grootjans/Magdalena Wejda (Partner 5) |
|
11:15 - 11:35 |
Luca Griego (Partner 20) |
|
11:35 - 11:55 |
Pekka Kohonen (Partner 11) |
|
11:55 - 12:15 |
Petri Puustinen (Partner 8) |
|
12:15 - 13:15 |
Lunch |
|
13:15 - 13:35 |
Takuya Noguchi (Partner 7) |
|
13:35 - 13:55 |
Rajiv Kumar (Partner 12) |
|
13:55 - 14:15 |
Sebastian Dazy (Partner 21) |
|
14:15 - 14:35 |
Yuval Gilad (Partner 10) |
|
14:35 - 15:00 |
Tea Break |
|
15:00 - 15:20 |
Wieland Reichelt (Partner 19) |
|
15:20 - 15:40 |
Carmela Dell’aversana (Partner 22) |
|
15:40 - 16:00 |
Nikolay Samusik (Partner 15) |
| 16:00 - 16:10 | Gabriela Imreh |
Registration Fee = none
Please note that the cost of travel and accommodation is NOT covered.
All tea breaks, lunches, training and materials are covered. There is an optional complimentary meeting dinner open to all participants to attend. The venue for this is The Jade Fountain in Sawston:
The Jade Fountain
42-46 High Street
Sawston
CB2 4BG
Tel: (01223) 836100
Please complete the registration form using the link below. Items marked * are mandatory. Incomplete registrations will not be processed.
Registration Closed