A database of the known 3D structures of proteins and nucleic acids
Ligand molecules listing ( 456 entries )
This list gives all the complete molecules bound to protein or DNA/RNA in the structures of the PDB.
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1 | 51 | 101 | 151 | 201 | 251 | 301 | 351 | 401 | 451 List of pairs

___Id____

Formula
Description No_of_PDB. entries

S01
 C27H26N3OCL 1- [4- (8- CHLORO- 3- METHYL- 5,6- DIHYDRO- BENZO[5,6]CYCLOHEPTA[1,2- B]PYRIDIN- 11- YLIDENE)- PIPERIDIN- 1- YL]- 2- PYRIDIN- 4- YL- ETHANONE 1

S03
 C25H27N5O2 1- {4- [4- AMINO- 5- (3- METHOXYPHENYL)- 7H- PYRROLO[2,3- D]PYRIMIDIN- 7- YL]BENZYL}PIPERIDIN- 4- OL 1

S0H
 C3H9O4P (S)- 2- HYDROXYPROPYLPHOSPHONIC ACID 3

S10
 C9H18N2O4 DIETHYL PROPANE- 1,3- DIYLBISCARBAMATE 1

S11
 C20H20N4O2CL2S 5- (3,5- DICHLOROPHENYL)THIO- 4- ISOPROPYL- 1- (PYRIDIN- 4- YL- METHYL)- 1H- IMIDAZOL- 2- YL- METHYL CARBAMATE 1

S14
 C22H25N6O2F 6- (4- {(1S,2S)- 2- AMINO- 1- [(DIMETHYLAMINO)CARBONYL]- 3- [(3S)- 3- FLUOROPYRROLIDIN- 1- YL]- 3- OXOPROPYL}PHENYL)- 1H- [1,2,4]TRIAZOLO[1,5- A]PYRIDIN- 4- IUM 1

S1A
 C29H44O8 SORAPHEN A 1

S1S
 C41H46N4O10 2- (4- ((9S,10S,14S,Z)- 18- (2- AMINO- 2- OXOETHYL)- 9- (CARBOXYMETHYL)- 14- (NAPHTHALEN- 1- YLMETHYL)- 8,17,20- TRIOXO- 7,16,19- TRIAZASPIRO[5.14]ICOS- 11- EN- 10- YL)PHENYL)MALONIC ACID 2

S27
 C20H27N2O3P N- [[2- METHYL- 4- HYDROXYCARBAMOYL]BUT- 4- YL- N]- BENZYL- P- [PHENYL]- P- [METHYL]PHOSPHINAMID 1

S2A
 C33H33NO6 (1R,3A'S,10'S,10A'R)- 7- METHOXY- 2- OXO- 10',10A'- DIHYDRO- 2H,3A'H- SPIRO[NAPHTHALENE- 1,3'- PENTALENO[1,2- B]NAPHTHALEN]- 10'- YL 2,6- DIDEOXY- 2- (METHYLAMINO)- ALPHA- D- GALACTOPYRANOSIDE 1

S2C
 C5H13NO5BS S- 2- (BORONOETHYL)- L- CYSTEINE 5

S3P
 C7H11O8P SHIKIMATE- 3- PHOSPHATE 11

S48
 C27H30N6O4S METHYL N- {(3S)- 1- [(1- METHYL- 1H- IMIDAZOL- 5- YL)METHYL]- 6- PHENYL- 1,2,3,4- TETRAHYDROQUINOLIN- 3- YL}- N- [(1- METHYL- 1H- IMIDAZOL- 4- YL)SULFONYL]GLYCINATE 1

S4M
 C14H24N6O3S 5'- [(S)- (3- AMINOPROPYL)(METHYL)- LAMBDA~4~- SULFANYL]- 5'- DEOXYADENOSINE 1

S4P
     1

S4U
     1

S57
 C16H21N2O2CL 1- [6- (2- CHLORO- 4- METHYXYPHENOXY)- HEXYL]- IMIDAZOLE 1

S58
 C16H11N3O2BRF3S   2

S5H
 C25H38O5 5- ALPHA- PREGNANE- 3- BETA- OL- HEMISUCCINATE 1

S6P
 C6H15O9P D- SORBITOL- 6- PHOSPHATE 3

S70
 C4H6O9P2 3- HYDROXY- 2- OXO- 4- PHOPHONOXY- BUTYL)- PHOSPHONIC ACID 1

S79
 C20H16N6O 6- AMINO- 2- [(1- NAPHTHYLMETHYL)AMINO]- 3,7- DIHYDRO- 8H- IMIDAZO[4,5- G]QUINAZOLIN- 8- ONE 1

S80
 C20H37N3O6 N1- HYDROXY- 2- (3- HYDROXY- PROPYL)- 3- ISOBUTYL- N4- [1- (2- METHOXY- ETHYL)- 2- OXO- AZEPAN- 3- YL]- SUCCINAMIDE 1

S9L
 C6H15O7P 2- [2- (2- HYDROXYETHOXY)ETHOXY]ETHYL DIHYDROGEN PHOSPHATE 1

SA1
 C15H21NO4 (3AR,6R,6AS)- 6- ((S)- ((S)- CYCLOHEX- 2- ENYL)(HYDROXY)METHYL)- 6A- METHYL- 4- OXO- HEXAHYDRO- 2H- FURO[3,2- C]PYRROLE- 6- CARBALDEHYDE 1

SA2
 C13H19NO9S   1

SA3
 C26H21N3O9 2,10- DIHYDROXY- 12- (BETA- D- GLUCOPYRANOSYL)- 6,7,12,13- TETRAHYDROINDOLO[2,3- A]PYRROLO[3,4- C]CARBAZOLE- 5,7- DIONE 1

SA8
 C15H23N7O5 S- 5'- AZAMETHIONINE- 5'- DEOXYADENOSINE 3

SAB
 C11H17N3O3S 4- SULFONAMIDE- [1- (4- AMINOBUTANE)]BENZAMIDE 1

SAD
 C20H27N7O13P2SE BETA- METHYLENE- SELENAZOLE- 4- CARBOXYAMIDE- ADENINE DINUCLEOTIDE 1

SAE
 C19H25N7O14P2SE SELENAZOLE- 4- CARBOXYAMIDE- ADENINE DINUCLEOTIDE 1

SAF
 C10H15NO 3- [(1S)- 1- (DIMETHYLAMINO)ETHYL]PHENOL 2

SAH
 C14H20N6O5S S- ADENOSYL- L- HOMOCYSTEINE 239

SAH
 C14H20N6O5S S- ADENOSYL- L- HOMOCYSTEINE 1

SAI
 C14H20N6O5SE S- ADENOSYL- L- HOMOSELENOCYSTEINE 3

SAL
 C7H6O3 2- HYDROXYBENZOIC ACID 11

SAM
 C15H22N6O5S S- ADENOSYLMETHIONINE 93

SAM
 C15H22N6O5S S- ADENOSYLMETHIONINE 2

SAN
 C6H8N2O2S SULFANILAMIDE 1

SAP
 C10H16N5O12P3S ADENOSINE- 5'- DIPHOSPHATE MONOTHIOPHOSPHATE 11

SAS
 C18H14N4O5S 2- HYDROXY- (5- ([4- (2- PYRIDINYLAMINO)SULFONYL]PHENYL)AZO)BENZOIC ACID 1

SAZ
 C14H26N   2

SB1
 C24H39NO6 (21S)- 1AZA- 4,4- DIMETHYL- 6,19- DIOXA- 2,3,7,20- TETRAOXOBICYCLO[19.4.0] PENTACOSANE 1

SB2
 C21H16N3OFS   3

SB3
 C28H35NO4 1,3- DIPHENYL- 1- PROPYL- 1- (3,3- DIMETHYL- 1,2- DIOXYPENTYL)- 2- PIPERIDINE CARBOXYLATE 1

SB4
 C18H19N6F   2

SB5
 C17H16N5F   1

SB6
 C18H16N3F   1

SB7
 C10H15NO2 [HYDROXY(3- PHENYLPROPYL)AMINO]METHANOL 2

SB8
 C16H15NO4 2- (3- BENZOYLPHENOXY)ETHYL(HYDROXY)FORMAMIDE 1
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