A database of the known 3D structures of proteins and nucleic acids
Ligand molecules listing ( 369 entries )
This list gives all the complete molecules bound to protein or DNA/RNA in the structures of the PDB.
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1 | 51 | 101 | 151 | 201 | 251 | 301 | 351 List of pairs

___Id____

Formula
Description No_of_PDB. entries

L01
 C32H41N3O4 3- [({(1S,2R)- 1- BENZYL- 2- HYDROXY- 3- [(3- METHOXYBENZYL) AMINO]PROPYL}AMINO)(HYDROXY)METHYL]- N,N- DIPROPYLBENZAMIDE 1

L02
 C14H16N3CL 4- [3- (4- CHLOROPHENYL)- 1H- PYRAZOL- 5- YL]PIPERIDINE 1

L03
 C9H8N3CLS 3- (4- CHLOROPHENYL)- 5- (METHYLTHIO)- 4H- 1,2,4- TRIAZOLE 1

L04
 C43H48N3O5F 6- (4'- FLUORO- BIPHENYL- 4- YL)- 4- (3- METHYL- 1- PHENYLCARBAMOYL- BUTYLCARBAMOYL)- 2- [4- (1- OXO- 1,3- DIHYDRO- ISOINDOL- 2- YL)- BUTYL]- HEXANOIC ACID 1

L05
 C24H20N2O3 1- BENZYL- 3- (4- METHOXYPHENYLAMINO)- 4- PHENYLPYRROLE- 2,5- DIONE 1

L06
 C7H15N3O2S 5- {[AMINO(IMINO)METHYL]AMINO}- 2- (SULFANYLMETHYL)PENTANOIC ACID 1

L08
 C25H26N4O4S   1

L09
 C20H22N5O2CL N- (3- TERT- BUTYL- 1H- PYRAZOL- 5- YL)- N'- {4- CHLORO- 3- [(PYRIDIN- 3- YLOXY)METHYL]PHENYL}UREA 1

L10
 C20H22N4OCL N- [(3Z)- 5- TERT- BUTYL- 2- PHENYL- 1,2- DIHYDRO- 3H- PYRAZOL- 3- YLIDENE]- N'- (4- CHLOROPHENYL)UREA 1

L11
 C23H25N3O3CLF N- [4- CHLORO- 3- (PYRIDIN- 3- YLOXYMETHYL)- PHENYL]- 3- FLUORO-  1

L12
 C15H14N2 3- (2- PYRIDIN- 4- YLETHYL)- 1H- INDOLE 1

L13
 C9H10N4S   1

L15
 C12H15N3 2- [4- (3- METHYL- 1H- PYRAZOL- 4- YL)PHENYL]ETHANAMINE 1

L17
 C22H22N4O3CL2F2 L17 1

L1A
 C33H50N6O7S2 N- (MORPHOLIN- 4- YLSULFONYL)- L- PHENYLALANYL- 3- (2- AMINO- 1,3- THIAZOL- 4- YL)- N- {(1R,2R,3S)- 1- [(1R)- CYCLOHEX- 3- EN- 1- YLMETHYL]- 2,3- DIHYDROXY- 5- METHYLHEXYL}- L- ALANINAMIDE 1

L1B
 C19H24N5O   1

L1G
 C33H39N9O2 N- (4- {4- AMINO- 1- [4- (4- METHYLPIPERAZIN- 1- YL)- TRANS- CYCLOHEXYL]- 1H- PYRAZOLO[3,4- D]PYRIMIDIN- 3- YL}- 2- METHOXYPHENYL)- 1- METHYL- 1H- INDOLE- 2- CARBOXAMIDE 1

L1P
 C43H89O6P 3- PHOSPHORYL- [1,2- DI- PHYTANYL]GLYCEROL 2

L20
 C24H23N5O (2S)- 1- (1H- INDOL- 3- YL)- 3- {[5- (3- METHYL- 1H- INDAZOL- 5- YL)PYRIDIN- 3- YL]OXY}PROPAN- 2- AMINE 4

L24
 C21H25N5O6 [[[2- AMINO- 5,6,7,8- TETRAHYDRO- 4- HYDROXY- PYRIDO[2,3- D]PYRIMIDIN- 6- YL]- ETHYL]- PHENYL]- CARBONYL- GLUTAMIC ACID 1

L27
 C35H37N3O6 {1- BENZYL- 3- [2- BENZYL- 3- OXO- 4- (1- OXO- 1,2,3,4- TETRAHYDRO- ISOQUINOLIN- 4- YL)- 2,3- DIHYDRO- 1H- PYRROL- 2- YL]- 2- HYDROXY- PROPYL}- CARBAMIC ACID TETRAHYDRO- FURAN- 3- YL ESTER 1

L2C
 C24H46O5 (2S)- 3- HYDROXY- 2- (NONANOYLOXY)PROPYL LAURATE 4

L2G
 C34H39N9O3 N- (4- {1- [4- (4- ACETYLPIPERAZIN- 1- YL)- TRANS- CYCLOHEXYL]- 4- AMINO- 1H- PYRAZOLO[3,4- D]PYRIMIDIN- 3- YL}- 2- METHOXYPHENYL)- 1- METHYL- 1H- INDOLE- 2- CARBOXAMIDE 1

L2P
 C43H88O3 2,3- DI- PHYTANYL- GLYCEROL 7

L2P-GLC- MAN-GAL
     2

L34
 C20H21N7O7 4- (7- AMINO- 9- HYDROXY- 1- OXO- 3,3A,4,5- TETRAHYDRO- 2,5,6,8,9B- PENTAAZA- CYCLOPENTA[A]NAPHTHALEN- 2- YL)- PHENYLCARBONYL- GLUTAMIC ACID 1

L35
 C17H16N2O4CL2 2- [4- ({[(3,5- DICHLOROPHENYL)AMINO]CARBONYL}AMINO)PHENOXY]- 2- METHYLPROPANOIC ACID 3

L37
 C17H19N7O7 [[N'- (2,5- DIAMINO- 6- HYDROXY- PYRIMIDIN- 4- YL)- UREAYL]- PHEN- 4- YL]- CARBONYL- GLUTAMIC ACID 1

L3G
 C32H36N8O3 N- (4- {4- AMINO- 1- [1- (TETRAHYDRO- 2H- PYRAN- 4- YL)PIPERIDIN- 4- YL]- 1H- PYRAZOLO[3,4- D]PYRIMIDIN- 3- YL}- 2- METHOXYPHENYL)- 1- METHYL- 1H- INDOLE- 2- CARBOXAMIDE 1

L3P
 C46H94O11P2 2,3- DI- O- PHYTANLY- 3- SN- GLYCERO- 1- PHOSPHORYL- 3'- SN- GLYCEROL- 1'- PHOSPHATE 9

L47
 C17H15N2O2CL   1

L4C
 C10H14N2O8 (2E)- 2- {[(2S)- 2- (ACETYLAMINO)- 2- CARBOXYETHOXY]IMINO}PENTANEDIOIC ACID 1

L4G
 C30H31NO5S 6- (4- METHYLSULFONYL- PHENYL)- 5- [4- (2- PIPERIDIN- 1- YLETHOXY)PHENOXY]NAPHTHALEN- 2- OL 1

L4P
 C46H95O8P 3- [GLYCEROLYLPHOSPHONYL]- [1,2- DI- PHYTANYL]GLYCEROL 2

L75
 C39H48N4O5 N- [2(R)- HYDROXY- 1(S)- INDANYL]- 2(R)- PHENYLMETHYL- 4(S)- HYDROXY- 5- [4- [2- BENZOFURANYLMETHYL]- 2(S)- [TERT- BUTYLAMINOCARBONYL]- PIPERAZINYL]- PENTANEAMIDE 1

L79
 C25H30O3 (S)- (2E)- 3[4- (5,5,8,8- TETRAMETHYL- 5,6,7,8- TETRAHYDRO- 2- NAPHTHALENYL)TETRAHYDRO- 1- BENZOFURAN- 2- YL]- 2- PROPENOIC ACID 1

L86
 C27H33N6O2CL (11S)- 11- BENZYL- 6- CHLORO- 1,2,10,11,12,13,14,15,16,17,18,19- DODECAHYDRO- 5,9- METHANO- 2,5,8,10,13,17- BENZOHEXAAZACYCLOHENICOSINE- 3,24- DIONE 1

L98
 C10H13N3O2S (2R)- 2- (3- {[AMINO(IMINO)METHYL]AMINO}PHENYL)- 3- SULFANYLPROPANOIC ACID 1

LA1
 C33H36N4O3 (2R)- 2- [3- ISOBUTYL- 2,5- DIOXO- 4- (QUINOLIN- 3- YLMETHYL)- 1,4- DIAZEPAN- 1- YL]- N- METHYL- 3- (2- NAPHTHYL)PROPANAMIDE 1

LAB
 C20H29NO5S LATRUNCULIN B 1

LAC
 C3H6O3 LACTIC ACID 10

LAD
 C16H26N7O8P ADENOSINE- 5'- [LYSYL- PHOSPHATE] 1

LAE
 C12H19NO4 3- OXO- OCTANOIC ACID (2- OXO- TETRAHYDRO- FURAN- 3- YL)- AMIDE 2

LAF
 C5H7O3F 5- FLUOROLEVULINIC ACID 1

LAG
 C18H32N2O15 MALTOSYL- ALPHA (1,4)- (Z,3S,4S,5R,6R)- 3,4,5- TRIHYDROXY- 6- HYDROXYMETHYL- PIPERIDIN- 2- ONE OXIME 1

LAK
 C12H22O11 BETA- D- GALACTOPYRANOSYL- 1- 6- BETA- D- GLUCOPYRANOSE 2

LAK-LAK- LAK
     1

LAM
 C24H35NO17S 4'- NITROPHENYL- S- (BETA- D- GLUCOPYRANOSYL)- (1- 3)- (3- THIO- BETA- D- GLUCOPYRANOSYL)- (1- 3)- BETA- D- GLUCOPYRANOSIDE 1

LAN
 C30H50O LANOSTEROL 1

LAP
 C20H43NO7P+ [2- ((1- OXODODECANOXY- (2- HYDROXY- 3- PROPANYL))- PHOSPHONATE- OXY)- ETHYL]- TRIMETHYLAMMONIUM 1
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