A database of the known 3D structures of proteins and nucleic acids
Ligand molecules listing ( 75 entries )
This list gives all the complete molecules bound to protein or DNA/RNA in the structures of the PDB.
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1 | 51 List of pairs

___Id____

Formula
Description No_of_PDB. entries

K01
 C18H22N2O2S2 N,N- DIETHYL- 2- [(2- THIENYLCARBONYL)AMINO]- 4,5,6,7- TETRAHYDRO- 1- BENZOTHIOPHENE- 3- CARBOXAMIDE 1

K02
 C19H24N2O2S2 (5R)- N,N- DIETHYL- 5- METHYL- 2- [(THIOPHEN- 2- YLCARBONYL)AMINO]- 4,5,6,7- TETRAHYDRO- 1- BENZOTHIOPHENE- 3- CARBOXAMIDE 1

K03
 C20H26N2O2S2 N,N- DIETHYL- 5,5- DIMETHYL- 2- [(2- THIENYLCARBONYL)AMINO]- 4,5,6,7- TETRAHYDRO- 1- BENZOTHIOPHENE- 3- CARBOXAMIDE 1

K05
 C19H16N2O4 (E)- 3,4- DIHYDROXY- N'- [(2- METHOXYNAPHTHALEN- 1- YL)METHYLENE]BENZOHYDRAZIDE 1

K10
 C18H23N5 1- TERT- BUTYL- 3- (2,5- DIMETHYLBENZYL)- 1H- PYRAZOLO[3,4- D]PYRIMIDIN- 4- AMINE 1

K17
 C7H2BR4N2 4,5,6,7- TETRABROMO- BENZIMIDAZOLE 1

K21
 C25H32N2O2S 4- [3- {1- (4- BENZYL)PIPERODINYL}PROPIONYL]- 7- METHOXY- 2,3,4,5- TERTRAHYDRO- 1,4- BENZOTHIAZEPINE 1

K22
 C7H2BR4N2S 4,5,6,7- TETRABROMO- 1H,3H- BENZIMIDAZOL- 2- THIONE 1

K25
 C9H7N3BR4 4,5,6,7- TETRABROMO- N,N- DIMETHYL- 1H- BENZIMIDAZOL- 2- AMINE 1

K2C
 C20H13N3O 6,7,12,13- TETRAHYDRO- 5H- INDOLO[2,3- A]PYRROLO[3,4- C]CARBAZOL- 5- ONE 1

K32
 C7H2BR4N2O 4,5,6,7- TETRABROMO- 1H,3H- BENZIMIDAZOL- 2- ONE 1

K37-K37
     1

K44
 C10H7N3BR4   1

K57
 C28H37N3O5S 3- [2- HYDROXY- 3- (3- HYDROXY- 2- METHYL- BENZOYLAMINO)- 4- PHENYL- BUTYRYL]- 5,5- DIMETHYL- THIAZOLIDINE- 4- CARBOXYLIC ACID TERT- BUTYLAMIDE 2

K64
 C32H37N3O5S 3- [2- HYDROXY- 3- (3- HYDROXY- 2- METHYL- BENZOYLAMINO)- 4- PHENYL- BUTYRYL]- 5,5- DIMETHYL- THIAZOLIDINE- 4- CARBOXYLIC ACID 2- METHYL- BENZYLAMIDE 2

KAB
 C48H71N5O14 KABIRAMIDE C 2

KAH
 C6H13NO3 5- AMINO- 4- HYDROXYHEXANOIC ACID 1

KAI
 C10H17NO4 3- CARBOXYMETHYL- 4- ISOPROPYL- PYRROLIDINE- 2- CARBOXYLIC ACID 8

KAM
 C17H27N2O8P N- [7- KETO- 8- AMINOPELARGONIC ACID]- [3- HYDROXY- 2- METHYL- 5- PHOSPHONOOXYMETHYL- PYRIDIN- 4- YL- METHANE] 1

KAN
 C18H36N4O11 KANAMYCIN A 5

KAP
 C9H17NO3 7- KETO- 8- AMINOPELARGONIC ACID 1

KAR
 C46H56N5O7CL 3"- (BETA- CHLOROETHYL)- 2",4"- DIOXO- 3, 5"- SPIRO- OXAZOLIDINO- 4- DEACETOXY- VINBLASTINE 1

KBG
 C6H10O6 2- KETO- BETA- D- GLUCOSE 1

KCP
 C14H16N2O5S2 2- [CARBOXY- (2- THIOPHEN- 2- YL- ACETYLAMINO)- METHYL]- 5- METHYL- 3,6- DIHYDRO- 2H- [1,3]THIAZINE- 4- CARBOXYLIC ACID 1

KCQ
 C8H14N2O2 (3S)- 3- [(2S)- 2- AMINO- 3- OXOBUTYL]PYRROLIDIN- 2- ONE 1

KCQ-ECQ
     1

KDA-KDO
     2

KDA-KDO- KDO
     1

KDG
 C6H10O6 2- KETO- 3- DEOXYGLUCONATE 1

KDO
 C8H14O8 3- DEOXY- D- MANNO- OCT- 2- ULOSONIC ACID 1

KDO-KDO- GMH-GMH- GLC-GAL- GAL-PO4
     2

KDO-KDO- KDO
     1

KDO-KDO- KDO-GP4- GP1
     1

KDP
 C6H11O9P 3- DEOXY- 6- O- PHOSPHONO- D- THREO- HEX- 2- ULOSONIC ACID 1

KE4
 C13H22N3O7P (4R)- 5- AMINO- 4- [({3- HYDROXY- 2- METHYL- 5- [(PHOSPHONOOXY)METHYL]PYRIDIN- 4- YL}METHYL)AMINO]PENTANOIC ACID 1

KEF
 C16H16N4O8S CEFUROXIME (OCT- 3- ENE FORM) 1

KEG
 O40PW12 12- TUNGSTOPHOSPHATE 2

KET
 C12H16N2O9P 2- [(3- HYDROXY- 2- METHYL- 5- PHOSPHONOOXYMETHYL- PYRIDIN- 4- YLMETHYLENE)- AMINO]- SUCCINIC ACID 1

KEU
 C22H30N5O8F3 N- {4- [(1R)- 4- [(2R,4R,5S)- 2,4- DIAMINO- 6- OXOHEXAHYDROPYRIMIDIN- 5- YL]- 1- (2,2,2- TRIFLUORO- 1,1- DIHYDROXYETHYL)BUTYL]BENZOYL}- D- GLUTAMIC ACID 3

KGQ
 C33H49N2O12PS DIETHYL ({4- [(2S,3R)- 2- ({[(3R,3AS,6AR)- HEXAHYDROFURO[2,3- B]FURAN- 3- YLOXY]CARBONYL}AMINO)- 3- HYDROXY- 4- {ISOBUTYL[(4- METHOXYPHENYL) SULFONYL]AMINO}BUTYL]PHENOXY}METHYL)PHOSPHONATE 2

KGR
 C6H7O7 5- KETO- 4- DEOXYGLUCARATE 1

KGY
 C22H27N3O8S2 4- ({[4- (BUT- 2- YN- 1- YLOXY)PHENYL]SULFONYL}METHYL)- 1- [(3,5- DIMETHYLISOXAZOL- 4- YL)SULFONYL]- N- HYDROXYPIPERIDINE- 4- CARBOXAMIDE 1

KH1
 C29H48O4 5- (2- {1- [1- (4- ETHYL- 4- HYDROXY- HEXYLOXY)- ETHYL]- 7A- METHYL- OCTAHYDRO- INDEN- 4- YLIDENE}- ETHYLIDENE)- 4- METHYLENE- CYCLOHEXANE- 1,3- DIOL 1

KHA
 C16H25N2O2   1

KHO
 C10H18O9 4- (3,4- DIHYDROXY- 5- HYDROXYMETHYL- TETRAHYDRO- FURAN- 2- YLOXY)- TETRAHYDRO- PYRAN- 2,3,5- TRIOL 1

KHP
 C11H13NO7 2- HYDROXYMETHYL- 5- (4- NITRO- PHENOXY)- TETRAHYDRO- FURAN- 3,4- DIOL 1

KI2-PHE- GLU-GLU- NH2
     2

KIF
 C8H12N2O6 KIFUNENSINE 3

KIN
 C19H14N3O2F3   1

KIR
 C43H60N2O12 KIRROMYCIN 1
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