A database of the known 3D structures of proteins and nucleic acids
Ligand molecules listing ( 341 entries )
This list gives all the complete molecules bound to protein or DNA/RNA in the structures of the PDB.
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1 | 51 | 101 | 151 | 201 | 251 | 301 List of pairs

___Id____

Formula
Description No_of_PDB. entries

F09
 C9H20O NONAN- 1- OL 14

F10
 C18H14N3OF 2- [2- (2- FLUOROPHENYL)PYRIDIN- 4- YL]- 1,5,6,7- TETRAHYDRO- 4H- PYRROLO[3,2- C]PYRIDIN- 4- ONE 1

F11
 C31H36N4 N,N'- DI- 1,2,3,4- TETRAHYDROACRIDIN- 9- YLPENTANE- 1,5- DIAMINE 1

F12
 C7H7NO3S 2- (ACETYLAMINO)THIOPHENE- 3- CARBOXYLIC ACID 1

F15
 C15H30O2 PENTADECANOIC ACID 2

F16
 C9H7NO4S 5- (3- HYDROXYPHENYL)ISOTHIAZOL- 3(2H)- ONE 1,1- DIOXIDE 1

F17
 C32H29N5O9S2 N- {[4- (1,1- DIOXIDO- 3- OXO- 2,3- DIHYDROISOTHIAZOL- 5- YL)PHENYL]ACETYL}- L- PHENYLALANYL- 4- (1,1- DIOXIDO- 3- OXO- 2,3- DIHYDROISOTHIAZOL- 5- YL)- L- PHENYLALANINAMIDE 1

F18
 C9H10N6O 4- [(E)- (3,5- DIAMINO- 1H- PYRAZOL- 4- YL)DIAZENYL]PHENOL 1

F19
 C12H14NO6PS 2- [(2- NAPHTHYLSULFONYL)AMINO]ETHYL DIHYDROGEN PHOSPHATE 2

F1G
 C10H10N3OF3S2 1- METHYL- 3- TRIFLUOROMETHYL- 1H- THIENO[2,3- C]PYRAZOLE- 5- CARBOXYLIC ACID (2- MERCAPTO- ETHYL)- AMIDE 1

F1P
 C6H13O9P 1- O- PHOSPHONO- BETA- D- FRUCTOPYRANOSE 1

F20
 C28H28N4O6S N- BENZOYL- L- PHENYLALANYL- 4- [(5S)- 1,1- DIOXIDO- 3- OXOISOTHIAZOLIDIN- 5- YL]- L- PHENYLALANINAMIDE 1

F21
 C14H19N2O2FS2 (3R)- 3- (FLUOROMETHYL)- 7- (THIOMORPHOLIN- 4- YLSULFONYL)- 1,2,3,4- TETRAHYDROISOQUINOLINE 1

F23
 C23H46O2 TRICOSANOIC ACID 1

F24
 C18H34O5 (3R,5S,7R,12S,13R)- 13- FORMYL- 12,14- DIHYDROXY- 3,5,7- TRIMETHYLTETRADECANOIC ACID 1

F25
 C24H26N4OF3 AMINO{4- [(1S,3AS,4R,8AS,8BR)- 1- (DIFLUOROMETHYL)- 2- (4- FLUOROBENZYL)- 3- OXODECAHYDROPYRROLO[3,4- A]PYRROLIZIN- 4- YL]PHENYL}METHANIMINIUM 1

F29
 C21H17N7 1- ALLYL- 5- (2- PHENYLPYRAZOLO[1,5- A]PYRIDIN- 3- YL)- 1H- PYRAZOLO[3,4- C]PYRIDAZIN- 3- AMINE 1

F2B
 C14H12N2O3F2S N- (2,3- DIFLUORO- BENZYL)- 4- SULFAMOYL- BENZAMIDE 2

F2G
 C21H45N3O7 3- (2- {2- [(CYCLOHEXYLMETHOXY- HYDRO- METHYL)- AMINO]- 1- HYDROXY- 3- METHYL- BUTYLAMINO}- 1- HYDROXY- PROPYLAMINO)- PENTANE- 1,1,4- TRIOL 4

F2I
 C32H38N3O3F2I N'- {(1S,2R)- 1- (3,5- DIFLUOROBENZYL)- 2- HYDROXY- 3- [(3- IODOBENZYL)AMINO]PROPYL}- 5- METHYL- N,N- DIPROPYLISOPHTHALAMIDE 1

F2O
 OFE2 MU- OXO- DIIRON(III) 1

F2P
 C6H16O12P2 1,6- DI- O- PHOSPHONO- D- ALLITOL 1

F32
 C25H21N5O3S2 (5S)- 5- {4- [(2S)- 2- (1H- BENZIMIDAZOL- 2- YL)- 2- (1,3- BENZOTHIAZOL- 2- YLAMINO)ETHYL]PHENYL}ISOTHIAZOLIDIN- 3- ONE 1,1- DIOXIDE 1

F3F
 C16H8N3O2F3S S- [5- (TRIFLUOROMETHYL)- 4H- 1,2,4- TRIAZOL- 3- YL] 5- (PHENYLETHYNYL)FURAN- 2- CARBOTHIOATE 1

F3G
 C21H29N3O7 3- [2- (2- BENZYLOXYCARBONYLAMINO- 3- METHYL- BUTYRYLAMINO)- PROPIONYLAMINO]- 4- OXO- PENTANOIC ACID 5

F3P
 C10H23O7FP2 (1S)- 1- [(1S)- 1- FLUOROETHYL]- 1,5- DIMETHYLHEXYL TRIHYDROGEN DIPHOSPHATE 1

F3S
 FE3S4 FE3- S4 CLUSTER 67

F42
 C29H35N5O18P COENZYME F420 2

F42-ACN
     1

F43
 C42H49N6O13NI FACTOR 430 6

F43-SHT
     1

F4S
 FE4S4 FE/S (INORGANIC) CLUSTER NUMBER 1 2

F50
 C2H4O3 ETHANEPEROXOIC ACID 1

F6B
 C14H12N2O3F2S N- (2,6- DIFLOURO- BENZYL)- 4- SULFAMOYL- BENZAMIDE 2

F6F
 C10H11NO6F3P 2- {[4- (TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE 3

F6P
 C6H13O9P FRUCTOSE- 6- PHOSPHATE 50

F6R
 C6H11O9P FRUCTOSE - 6- PHOSPHATE 3

F83
 C16H17N2O3CLS (3R)- N- (4- CHLOROPHENYL)- 3- (HYDROXYMETHYL)- 1,2,3,4- TETRAHYDROISOQUINOLINE- 7- SULFONAMIDE 1

F89
 C27H24N4O6 S)- 2- (5(((1,2- DIHYDRO- 3- METHYL- 1- OXOBENZO(F)QUINAZOLIN- 9- YL)METHYL)AMINO)1- OXO- 2- ISOINDOLINYL)GLUTARIC ACID 4

F9F
 C9H11NO7F3PS 2- ({[4- (TRIFLUOROMETHOXY)PHENYL]SULFONYL}AMINO)ETHYL DIHYDROGEN PHOSPHATE 2

FA1
 C7H10O5 2,3 - ANHYDRO- QUINIC ACID 3

FA3
 C7H9O5F 2- ANHYDRO- 3- FLUORO- QUINIC ACID 1

FA4
 C24H42N6O3 SM- 25453 2

FA5
 C19H23N6O8P ADENOSINE- 5'- [PHENYLALANINYL- PHOSPHATE] 1

FA6
 C7H11NO6 3- HYDROXYIMINO QUINIC ACID 1

FA9
 C36H43N9O16P2 [(2R,3S,4R,5R)- 5- (6- AMINO- 9H- PURIN- 9- YL)- 3,4- DIHYDROXYTETRAHYDROFURAN- 2- YL]METHYL (2R,3S, 4S)- 5- [(3R,3AS,7AR)- 10,11- DIMETHYL- 1,4,6- TRIOXO- 3- PHENYL- 2,3,5,6,7,7A- HEXAHYDRO- 1H- BENZO[G] PYRROLO[2,1- E]PTERIDIN- 8(4H)- YL]- 2,3,4- TRIHYDROXYPENTYL DIHYDROGEN DIPHOSPHATE 1

FAA
 C34H39N9O16P2 N5- (4- HYDROXYBENZYL)FLAVIN- ADENINE DINUCLEOTIDE 1

FAB
 C31H39N9O16P2 FLAVIN- ADENINE DINUCLEOTIDE- N5- ISOBUTYL KETONE 1

FAC
 C3H2O2F6 1,1,1,3,3,3- HEXAFLUOROPROPANEDIOL 1

FAD
 C27H33N9O15P2 FLAVIN- ADENINE DINUCLEOTIDE 633
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