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PDBsum entry 3ge1

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protein ligands metals Protein-protein interface(s) links
Transferase PDB id
3ge1
Jmol
Contents
Protein chains
499 a.a. *
Ligands
ADP ×4
GOL ×4
PO4 ×8
Metals
_CL ×4
Waters ×275
* Residue conservation analysis
PDB id:
3ge1
Name: Transferase
Title: 2.7 angstrom crystal structure of glycerol kinase (glpk) fro staphylococcus aureus in complex with adp and glycerol
Structure: Glycerol kinase. Chain: a, b, c, d. Synonym: atp:glycerol 3-phosphotransferase, glycerokinase, engineered: yes
Source: Staphylococcus aureus subsp. Aureus co organism_taxid: 93062. Strain: staphylococcus aureus subsp. Aureus col. Gene: glpk, sacol1320. Expressed in: escherichia coli. Expression_system_taxid: 562.
Resolution:
2.70Å     R-factor:   0.194     R-free:   0.253
Authors: G.Minasov,J.Brunzelle,T.Skarina,O.Onopriyenko,S.N.Peterson, A.Savchenko,W.F.Anderson,Center For Structural Genomics Of Infectious Diseases (Csgid)
Key ref: G.Minasov et al. 2.7 angstrom crystal structure of glycerol kinase (glpk) from staphylococcus aureus in complex with adp and glycerol. To be published, .
Date:
24-Feb-09     Release date:   24-Mar-09    
PROCHECK
Go to PROCHECK summary
 Headers
 References

Protein chains
Pfam   ArchSchema ?
Q5HGD2  (GLPK_STAAC) -  Glycerol kinase
Seq:
Struc:
498 a.a.
499 a.a.
Key:    PfamA domain  Secondary structure  CATH domain

 Enzyme reactions 
   Enzyme class: E.C.2.7.1.30  - Glycerol kinase.
[IntEnz]   [ExPASy]   [KEGG]   [BRENDA]
      Reaction: ATP + glycerol = ADP + sn-glycerol 3-phosphate
ATP
+
glycerol
Bound ligand (Het Group name = GOL)
corresponds exactly
=
ADP
Bound ligand (Het Group name = ADP)
corresponds exactly
+ sn-glycerol 3-phosphate
Molecule diagrams generated from .mol files obtained from the KEGG ftp site
 Gene Ontology (GO) functional annotation 
  GO annot!
  Biological process     carbohydrate metabolic process   5 terms 
  Biochemical function     nucleotide binding     6 terms