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SAS results for UniProt accession no. Q72G84

Sequence annotated by structure

Key:
Sec. struc: By homology
  Helix Strand  
Residue contacts:   to DNA/RNA
Active sites:   (from PDB SITE records)

Secondary structure shown in red comes from a homologous protein structure which is at least 30% sequence identical to the target protein and has an alignment overlap of at least 80 residues or at least three-quarters of the length of the target sequence (whichever overlap is the larger).

Click on annotated residues to get source(s) of each annotation.

 

FASTA alignment for UniProt accession no. Q72G84 - coloured by no. of contacts to ligand

Below are the FASTA results from a search of the sequence of UniProt accession no. Q72G84 against all protein sequences in the PDB. Identical sequences are grouped together and represented by a single 'consensus' sequence (asterisked) onto which all relevant annotations are mapped. The number of sequences represented by each consensus sequence is shown by the '×n' on the right of the alignment. Use the box below to modify the annotations shown on the alignment. At the bottom of the page are given the FASTA stats for all the sequences. There you can exclude any sequences from the alignment.

Struct

FASTA

The search returned 19 unique sequences (including 11 consensus sequences) giving 258 sequence matches in all.

Modify alignment: Annotate by:
  Number:  
  Show secondary structure: Yes No  


                1         2         3         4         5         6     
       12345678901234567890123456789012345678901234567890123456789012345    Protein name
       ---------+---------+---------+---------+---------+---------+-----    ------------
Q72G84 -----------------------------------------------------------------    50S ribosomal protein L28 OS=Thermus thermophilus (strain  ...
1vvm:1*-----------------------------------------------------------------×56 Crystal structure of frameshift suppressor tRNA sufa6 bound  ...
3hux:1 -----------------------------------------------------------------    Structure of ef-p bound to the 70s ribosome; this file  ...
2xg0:1*-----------------------------------------------------------------×4  Structure of cytotoxic domain of colicin e3 bound to the  ...
2wdi:1*-----------------------------------------------------------------×28 Structure of the thermus thermophilus 70s ribosome in  ...
4k0m:1*-----------------------------------------------------------------×2  Crystal structure of thermus thermophilus 70s containing  ...
2xqe:1*-----------------------------------------------------------------×24 The structure of ef-tu and aminoacyl-tRNA bound to the 70s  ...
2j01:1*-----------------------------------------------------------------×13 Structure of the thermus thermophilus 70s ribosome  ...
1vsa:V*-----------------------------------------------------------------×16 Crystal structure of a 70s ribosome-tRNA complex reveals  ...
1vs9:V -----------------------------------------------------------------    Crystal structure of a 70s ribosome-tRNA complex reveals  ...
2jl6:1*-----------------------------------------------------------------×2  Insights into translational termination from the structure  ...
2zjp:U*-----------------------------------------------------------------×10 Thiopeptide antibiotic nosiheptide bound to the large  ...
3zf7:K arrparcyrfcknkpypksrfcrgvpdprirtfdigkrrapvdefpvcvhvvsreleqisseale    High-resolution cryo-electron microscopy structure of the  ...
2jz6:A -----------------------------------------------------------------    Solution structure of 50s ribosomal protein l28 from  ...
3st9:A ----------------------ydiysrllkdriimlgsqiddnvansivsqllflqaqdsekdi    Crystal structure of clpp in heptameric form from  ...
1ri7:A*-------------------------------------------------------------ldei×3  Crystal structure of a protein in the lrp/asnc family from  ...
2e1c:A ------------------------------------------------------------pldei    Structure of putative hth-type transcriptional regulator  ...
2cyy:A ---------------------------------------------------------mrvpldei    Crystal structure of ph1519 from pyrococcus horikosii ot3
1vt2:X*-----------------------------------------------------------------×92 Crystal structure of the e. Coli ribosome bound to cem-101.  ...
1yv0:I -----------------------------------------------------------------    Crystal structure of skeletal muscle troponin in the ca2+-  ...

                                         1         1         1         1
           7         8         9         0         1         2         3
       67890123456789012345678901234567890123456789012345678901234567890    Protein name
       ----+---------+---------+---------+---------+---------+---------+    ------------
Q72G84 ------------mskvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv    50S ribosomal protein L28 OS=Thermus thermophilus (strain  ...
1vvm:1*-------------skvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×56 Crystal structure of frameshift suppressor tRNA sufa6 bound  ...
3hux:1 --------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv    Structure of ef-p bound to the 70s ribosome; this file  ...
2xg0:1*--------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×4  Structure of cytotoxic domain of colicin e3 bound to the  ...
2wdi:1*--------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×28 Structure of the thermus thermophilus 70s ribosome in  ...
4k0m:1*--------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×2  Crystal structure of thermus thermophilus 70s containing  ...
2xqe:1*--------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×24 The structure of ef-tu and aminoacyl-tRNA bound to the 70s  ...
2j01:1*-------------------sgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×13 Structure of the thermus thermophilus 70s ribosome  ...
1vsa:V*-------------------sgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×16 Crystal structure of a 70s ribosome-tRNA complex reveals  ...
1vs9:V ------------------------------qrrgkakreggvgkkttgi--skrrqypnlqkvrv    Crystal structure of a 70s ribosome-tRNA complex reveals  ...
2jl6:1*--------------kvceisgkrpivansiqrrgkakreggvgkkttgi--skrrqypnlqkvrv×2  Insights into translational termination from the structure  ...
2zjp:U*-------------------tgkknlvvnsvirrgkaradggvgrkttgi--tkrvqranlhkkai×10 Thiopeptide antibiotic nosiheptide bound to the large  ...
3zf7:K aariqankymvkrankecfhmrirahpfhvlrinkmlscagadrlqtgm--rqsygkpngtcarv    High-resolution cryo-electron microscopy structure of the  ...
2jz6:A -------qghmimakrcevcgkaprsgntvshsdkk---------------serwfrpnlqkvrv    Solution structure of 50s ribosomal protein l28 from  ...
3st9:A ylyinspggsvtagfaiydtiqhikpdvqticigmaasmgsfllaagak--gkrfalpn-aevmi    Crystal structure of clpp in heptameric form from  ...
1ri7:A*dkkiikilqndgkaplreiskitglaestiherirklresgvikkftaiidpealgysmlafilv×3  Crystal structure of a protein in the lrp/asnc family from  ...
2e1c:A dkkiikilqndgkaplreiskitglaestiherirklresgvikkftaiidpealgysmlafilv    Structure of putative hth-type transcriptional regulator  ...
2cyy:A dkkiikilqndgkaplreiskitglaestiherirklresgvikkftaiidpealgysmlafilv    Crystal structure of ph1519 from pyrococcus horikosii ot3
1vt2:X*-------------srvcqvtgkrpvtgnn---rsha----------lna--tkrrflpnlhshrf×92 Crystal structure of the e. Coli ribosome bound to cem-101.  ...
1yv0:I -----------------------------------------eekkrraa--tarrqh--lksaml    Crystal structure of skeletal muscle troponin in the ca2+-  ...

                1         1         1         1         1         1     
                4         5         6         7         8         9     
       12345678901234567890123456789012345678901234567890123456789012345    Protein name
       ---------+---------+---------+---------+---------+---------+-----    ------------
Q72G84 rv-agqe--it-frvaashipkvyelverakglrleglspkeikkellkll--------------    50S ribosomal protein L28 OS=Thermus thermophilus (strain  ...
1vvm:1*rv-agqe--it-frvaashipkvyelverakglkleglspkeikkellkll--------------×56 Crystal structure of frameshift suppressor tRNA sufa6 bound  ...
3hux:1 rv-agqe--it-frvaashipkvyelverakglkleglspkeikkellkll--------------    Structure of ef-p bound to the 70s ribosome; this file  ...
2xg0:1*rv-agqe--it-frvaashipkvyelverakglrleglspkeikkellk----------------×4  Structure of cytotoxic domain of colicin e3 bound to the  ...
2wdi:1*rv-agqe--it-frvaashipkvyelverakglkleglspkeikkellk----------------×28 Structure of the thermus thermophilus 70s ribosome in  ...
4k0m:1*rv-agqe--it-frvaashipkvyelverakglrleglspkeikkell-----------------×2  Crystal structure of thermus thermophilus 70s containing  ...
2xqe:1*rv-agqe--it-frvaashipkvyelverakglkleglspkeikkell-----------------×24 The structure of ef-tu and aminoacyl-tRNA bound to the 70s  ...
2j01:1*rv-agqe--it-frvaashipkvyelverakglkleglspkeikkellk----------------×13 Structure of the thermus thermophilus 70s ribosome  ...
1vsa:V*rv-agqe--it-frvaashipkvyelverakglrleglspkeikkell-----------------×16 Crystal structure of a 70s ribosome-tRNA complex reveals  ...
1vs9:V rv-agqe--it-frvaashipkvyelverakglkleglspkeikkellk----------------    Crystal structure of a 70s ribosome-tRNA complex reveals  ...
2jl6:1*rv-agqe--it-frvaashipkvyelvera-----------------------------------×2  Insights into translational termination from the structure  ...
2zjp:U*re-ngqv--kt-vwlsanalrtlskgpykgie---------------------------------×10 Thiopeptide antibiotic nosiheptide bound to the large  ...
3zf7:K ri-gqil--ls-mrtkdtyvpqaleslrrak-mkfpgrqiiviskywgftnilrneyeelrdagk    High-resolution cryo-electron microscopy structure of the  ...
2jz6:A vl-pdgt--ikrmrvctsclksgkvkkyvgqvsevgs----------------------------    Solution structure of 50s ribosomal protein l28 from  ...
3st9:A hq-pgqa--te-ieiaanhilktreklnrilsert-gqsiekiqkdtdrdnfltaeeakeyglid    Crystal structure of clpp in heptameric form from  ...
1ri7:A*kvkagk------ysevasnlakypeivevyettgdydmvvkirtknseelnnfldligsipgveg×3  Crystal structure of a protein in the lrp/asnc family from  ...
2e1c:A kvkagk------ysevasnlakypeivevyettgdydmvvkirtknseelnnfldligsipgveg    Structure of putative hth-type transcriptional regulator  ...
2cyy:A kvkagk------ysevasnlakypeivevyettgdydmvvkirtknseelnnfldligsipgveg    Crystal structure of ph1519 from pyrococcus horikosii ot3
1vt2:X*wv-esekrfvt-lrvsakgmrvidkkgidtvlaelrargeky-----------------------×92 Crystal structure of the e. Coli ribosome bound to cem-101.  ...
1yv0:I ql-avte--ie-keaaakevekqnylaehspplslpg-smqelq-elskklhakidsvdeerydt    Crystal structure of skeletal muscle troponin in the ca2+-  ...

           2         2         2         2  
           0         1         2         3  
       6789012345678901234567890123456789012                                Protein name
       ----+---------+---------+---------+--                                ------------
Q72G84 -------------------------------------                                50S ribosomal protein L28 OS=Thermus thermophilus (strain  ...
1vvm:1*-------------------------------------                            ×56 Crystal structure of frameshift suppressor tRNA sufa6 bound  ...
3hux:1 -------------------------------------                                Structure of ef-p bound to the 70s ribosome; this file  ...
2xg0:1*-------------------------------------                            ×4  Structure of cytotoxic domain of colicin e3 bound to the  ...
2wdi:1*-------------------------------------                            ×28 Structure of the thermus thermophilus 70s ribosome in  ...
4k0m:1*-------------------------------------                            ×2  Crystal structure of thermus thermophilus 70s containing  ...
2xqe:1*-------------------------------------                            ×24 The structure of ef-tu and aminoacyl-tRNA bound to the 70s  ...
2j01:1*-------------------------------------                            ×13 Structure of the thermus thermophilus 70s ribosome  ...
1vsa:V*-------------------------------------                            ×16 Crystal structure of a 70s ribosome-tRNA complex reveals  ...
1vs9:V -------------------------------------                                Crystal structure of a 70s ribosome-tRNA complex reveals  ...
2jl6:1*-------------------------------------                            ×2  Insights into translational termination from the structure  ...
2zjp:U*-------------------------------------                            ×10 Thiopeptide antibiotic nosiheptide bound to the large  ...
3zf7:K lqqrglhvklitpkgkitpynima-------------                                High-resolution cryo-electron microscopy structure of the  ...
2jz6:A -------------------------------------                                Solution structure of 50s ribosomal protein l28 from  ...
3st9:A evmvp--------------------------------                                Crystal structure of clpp in heptameric form from  ...
1ri7:A*thtmivlkthkettelpi-------------------                            ×3  Crystal structure of a protein in the lrp/asnc family from  ...
2e1c:A thtmivlkthkettelpi-------------------                                Structure of putative hth-type transcriptional regulator  ...
2cyy:A thtmivlkthkettelpik------------------                                Crystal structure of ph1519 from pyrococcus horikosii ot3
1vt2:X*-------------------------------------                            ×92 Crystal structure of the e. Coli ribosome bound to cem-101.  ...
1yv0:I evklqktnkeledlsqklfdlrgkfkrpplrrvrmsa                                Crystal structure of skeletal muscle troponin in the ca2+-  ...

Residue colours: black = 0, purple = 1, blue = 2, green = 3, orange = 4, red = 5 or more contacts.

Sequence listing

The listing below shows the FASTA statistics for the PDB entries that matched UniProt accession no. Q72G84. Ditto marks indicate identical sequences represented by a single representative sequence in the alignment above. The representative is asterisked and the names of all its duplicate sequences are indented to the right.

Structures whose names are given in purple are those that are annotated above. The parameters defining which sequences can transfer their annotations are shown at the bottom of the page where they can be altered and the alignment regenerated.

Use the checkboxes to the left of the PDB codes to exclude any sequences from the alignment Then click the SELECT button at the bottom of the page to redisplay the alignment.

Aligned sequences

  Smith-
Waterman
score
%-tage
identity
a.a.
overlap
Seq
len
z-score E-
value
  PDB
code
Protein name
1. - - - 98 - - Q72G84 50S ribosomal protein L28 OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=rpmB PE=1 SV=1
2. 606 99.0% 97 97 782.1 1.4e-36 1vvm:1 * Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u on the ribosome
3. " " " " " "  = 1vvo:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u on the ribosome
4. " " " " " "  = 1vvq:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-a on the ribosome
5. " " " " " "  = 1vvs:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-a on the ribosome
6. " " " " " "  = 1vvu:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccg-g on the ribosome
7. " " " " " "  = 1vvw:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccg-g on the ribosome
8. " " " " " "  = 1vvy:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u in the absence of paromomycin
9. " " " " " "  = 1vw0:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u in the absence of paromomycin
10. " " " " " "  = 1vx9:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccc-u ribosome
11. " " " " " "  = 1vxj:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccc-u ribosome
12. " " " " " "  = 1vxl:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccg-g ribosome
13. " " " " " "  = 1vxn:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccg-g ribosome
14. " " " " " "  = 1vxq:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccc-g ribosome
15. " " " " " "  = 1vxt:1 *
Crystal structure of tRNA proline (cgg) bound to codon ccc-g ribosome
16. " " " " " "  = 1vy1:1 *
Crystal structure of unmodified tRNA proline (cgg) bound to on the ribosome
17. " " " " " "  = 1vy3:1 *
Crystal structure of unmodified tRNA proline (cgg) bound to on the ribosome
18. " " " " " "  = 3i8f:Z *
Elongation complex of the 70s ribosome with three trnas and entry 3i8f contains 50s ribosomal subunit. The 30s ribosoma can be found in PDB entry 3i8g. Molecule b in the same asym unit is deposited as 3i8g (30s) and 3i8f (50s).
19. " " " " " "  = 3i8i:Z *
Elongation complex of the 70s ribosome with three trnas and entry 3i8i contains 50s ribosomal subnit. The 30s ribosomal can be found in PDB entry 3i8h. Molecule a in the same asym unit is deposited as 3i8f (50s) and 3i8g (30s).
20. " " " " " "  = 3i9c:Z *
Initiation complex of 70s ribosome with two trnas and mRNA. 3i9c contains 50s ribosomal subunit of molecule b. The 30s subunit can be found in PDB entry 3i9b. Molecule a in the s asymmetric unit is deposited as 3i9d (30s) and 3i9e (50s)
21. " " " " " "  = 3i9e:Z *
Initiation complex of 70s ribosome with two trnas and mRNA. 3i9e contains 50s ribosomal subunit of molecule a. The 30s subunit can be found in PDB entry 3i9d. Molecule b in the s asymmetric unit is deposited as 3i9b (30s) and 3i9c (50s)
22. " " " " " "  = 3tve:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the cognate tRNA-leu complex
23. " " " " " "  = 3tvh:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the second 70s molecule in the asymmetric unit for the cognate tRNA-leu complex
24. " " " " " "  = 3uxq:1 *
The structure of thermorubin in complex with the 70s ribosom thermus thermophilus. This file contains the 50s subunit of ribosome. The entire crystal structure contains two 70s rib
25. " " " " " "  = 3uxr:1 *
The structure of thermorubin in complex with the 70s ribosom thermus thermophilus. This file contains the 50s subunit of ribosome. The entire crystal structure contains two 70s rib
26. " " " " " "  = 3uye:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex
27. " " " " " "  = 3uyg:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex
28. " " " " " "  = 3uz1:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex with paromomycin
29. " " " " " "  = 3uz2:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-leu complex with paromomycin.
30. " " " " " "  = 3uz8:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the second 70s molecule in the asymmetric unit for the cognate tRNA-tyr complex.
31. " " " " " "  = 3uz9:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the cognate tRNA-tyr complex.
32. " " " " " "  = 3uzf:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-tyr complex
33. " " " " " "  = 3uzh:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-tyr complex.
34. " " " " " "  = 3uzk:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-tyr complex with paromomycin
35. " " " " " "  = 3uzn:Z *
Crystal structure analysis of ribosomal decoding. This entry the 50s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-tyr complex with paromomycin
36. " " " " " "  = 3v23:1 *
Crystal structure of rmf bound to the 70s ribosome. This PDB contains coordinates for the 50s subunit of the 1st ribosom asu
37. " " " " " "  = 3v25:1 *
Crystal structure of rmf bound to the 70s ribosome. This PDB contains coordinates for the 50s subunit of the 2nd ribosom asu
38. " " " " " "  = 3v27:1 *
Crystal structure of hpf bound to the 70s ribosome. This PDB contains coordinates for the 50s subunit of the 1st ribosom asu
39. " " " " " "  = 3v29:1 *
Crystal structure of hpf bound to the 70s ribosome. This ent contains the 50s subunit of the 2nd molecule in the asu.
40. " " " " " "  = 3v2d:1 *
Crystal structure of yfia bound to the 70s ribosome. This pd contains coordinates for the 50s subunit of the 1st ribosom asu
41. " " " " " "  = 3v2f:1 *
Crystal structure of yfia bound to the 70s ribosome. This pd contains coordinates for the 50s subunit of the 2nd ribosom asu
42. " " " " " "  = 4dha:1 *
Crystal structure of yaej bound to the 70s ribosome
43. " " " " " "  = 4dhc:1 *
Crystal structure of yaej bound to the 70s ribosome
44. " " " " " "  = 4g5l:Z *
Crystal structure of the 70s ribosome with tetracycline. Thi contains the 50s subunit of molecule a.
45. " " " " " "  = 4g5n:Z *
Crystal structure of the 70s ribosome with tetracycline. Thi contains the 50s subunit of molecule b.
46. " " " " " "  = 4g5u:Z *
Crystal structure of the 70s ribosome with tigecycline. This contains the 50s subunit of molecule a.
47. " " " " " "  = 4g5w:Z *
Crystal structure of the 70s ribosome with tigecycline. This contains the 50s subunit of molecule b.
48. " " " " " "  = 4kx0:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-g on the ribosome
49. " " " " " "  = 4kx2:1 *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-g on the ribosome
50. " " " " " "  = 4qcn:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing acylated substrates in the a and p sites. This entry contains the 50 of the first 70s ribosome in the asu.
51. " " " " " "  = 4qcp:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing acylated substrates in the a and p sites. This entry contains the 50 of the second 70s ribosome in the asu.
52. " " " " " "  = 4qcr:1 *
Crystal structure of the thermus thermophilus 70s ribosome i post-catalysis state of peptide bond formation containing d tRNA in the a site and deacylated tRNA in the p site. This contains the 50s subunit of the first 70s ribosome in the a
53. " " " " " "  = 4qct:1 *
Crystal structure of the thermus thermophilus 70s ribosome i post-catalysis state of peptide bond formation containing d tRNA in the a site and deacylated tRNA in the p site. This contains the 50s subunit of the second 70s ribosome in the
54. " " " " " "  = 4qcv:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing short sub mimic cytidine-puromycin in the a site and acylated tRNA in site. This entry contains the 50s subunit of the first 70s in the asu.
55. " " " " " "  = 4qcx:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing short sub mimic cytidine-puromycin in the a site and acylated tRNA in site. This entry contains the 50s subunit of the second 70s in the asu.
56. " " " " " "  = 4qcz:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing short sub mimic cytidine-cytidine-puromycin in the a site and acylate the p site. This entry contains the 50s subunit of the firs ribosome in the asu.
57. " " " " " "  = 4qd1:1 *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing short sub mimic cytidine-cytidine-puromycin in the a site and acylate the p site. This entry contains the 50s subunit of the seco ribosome in the asu.
58. 601 99.0% 96 96 775.9 3.1e-36 3hux:1 Structure of ef-p bound to the 70s ribosome; this file conta 50s subunit for molecule i.
59. 595 100.0% 94 94 768.4 8e-36 2xg0:1 * Structure of cytotoxic domain of colicin e3 bound to the 70s ribosome (part 2 of 4)
60. " " " " " "  = 2xg2:1 *
Structure of cytotoxic domain of colicin e3 bound to the 70s ribosome (part 4 of 4)
61. " " " " " "  = 3zn9:1 *
The crystal structure of agmatidine tRNA-ile2 bound to the 70s ribosome in the a and p site.
62. " " " " " "  = 3zne:1 *
The crystal structure of agmatidine tRNA-ile2 bound to the 70s ribosome in the a and p site.
63. 591 98.9% 94 94 763.3 1.5e-35 2wdi:1 * Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a-site tRNA, deacylated p-site tRNA, and e-site tRNA. This file contains the 50s subunit for molecule i.
64. " " " " " "  = 2wdj:1 *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a-site tRNA, deacylated p-site tRNA, and e-site tRNA. This file contains the 50s subunit for molecule ii.
65. " " " " " "  = 2wdl:1 *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a- and p-site trnas, and e-site tRNA. This file contains the 50s subunit for molecule i.
66. " " " " " "  = 2wdn:1 *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a- and p-site trnas, and e-site tRNA. This file contains the 50s subunit for molecule ii.
67. " " " " " "  = 2wh2:1 *
Insights into translational termination from the structure of rf2 bound to the ribosome
68. " " " " " "  = 2wh4:1 *
Insights into translational termination from the structure of rf2 bound to the ribosome
69. " " " " " "  = 2wrj:1 *
The structure of the ribosome with elongation factor g trapped in the post-translocational state (part 2 of 4).
70. " " " " " "  = 2wrl:1 *
The structure of the ribosome with elongation factor g trapped in the post-translocational state. (Part 4 of 4).
71. " " " " " "  = 2wro:1 *
The crystal structure of the 70s ribosome bound to ef-tu and tRNA (part 2 of 4).
72. " " " " " "  = 2wrr:1 *
The crystal structure of the 70s ribosome bound to ef-tu and tRNA (part 4 of 4).
73. " " " " " "  = 2x9s:1 *
Structure of the 70s ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release
74. " " " " " "  = 2x9u:1 *
Structure of the 70s ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release
75. " " " " " "  = 3huz:1 *
Structure of ef-p bound to the 70s ribosome; this file conta 50s subunit for molecule ii.
76. " " " " " "  = 3kni:1 *
The structures of viomycin bound to the 70s ribosome. This f contains the 50s subunit for molecule i
77. " " " " " "  = 3knk:1 *
The structures of viomycin bound to the 70s ribosome. This f contains the 50s subunit for molecule ii.
78. " " " " " "  = 3knm:1 *
The structures of capreomycin bound to the 70s ribosome. Thi contains the 50s subunit for molecule i.
79. " " " " " "  = 3kno:1 *
The structures of capreomycin bound to the 70s ribosome. Thi contains the 50s subunit for molecule ii
80. " " " " " "  = 3v6w:1 *
Crystal structure of the bacterial ribosome ram mutation g34 entry contains the 50s ribosomal subunit of the first 70s m the asymmetric unit
81. " " " " " "  = 3v6x:1 *
Crystal structure of the bacterial ribosome ram mutation g34 entry contains the 50s ribosomal subunit of the second 70s in the asymmetric unit
82. " " " " " "  = 3zvp:1 *
Crystal structure of the hybrid state of ribosome in complex the guanosine triphosphatase release factor 3
83. " " " " " "  = 4abs:1 *
Complex of smpb, a tmrna fragment and ef-tu-gdp-kirromycin w 70s ribosome
84. " " " " " "  = 4b8g:1 *
Crystal structure of 70s ribosome with both cognate trnas in and p sites representing an authentic elongation complex.
85. " " " " " "  = 4b8i:1 *
Crystal structure of 70s ribosome with both cognate trnas in and p sites representing an authentic elongation complex.
86. " " " " " "  = 4btd:1 *
Thermus thermophilus ribosome
87. " " " " " "  = 4byc:1 *
Structure of thermus thermophilus 50s ribosome
88. " " " " " "  = 4bye:1 *
Structure of thermus thermophilus 50s ribosome
89. " " " " " "  = 4ejb:1 *
Crystal structure of the bacterial ribosome ram mutation g29 entry contains the 50s ribosomal subunit of the first 70s m the asymmetric unit.
90. " " " " " "  = 4ejc:1 *
Crystal structure of the bacterial ribosome ram mutation g29 entry contains the 50s ribosomal subunit of the second 70s in the asymmetric unit.
91. 589 100.0% 93 93 760.8 2.1e-35 4k0m:1 * Crystal structure of thermus thermophilus 70s containing trn mRNA stop codon with pseudouridine
92. " " " " " "  = 4k0q:1 *
Crystal structure of thermus thermophilus 70s containing trn mRNA stop codon with pseudouridine
93. 585 98.9% 93 93 755.7 4.1e-35 2xqe:1 * The structure of ef-tu and aminoacyl-tRNA bound to the 70s ribosome with a gtp analog
94. " " " " " "  = 2xtg:1 *
tRNA tranlocation on the 70s ribosome: the pre- translocational translocation intermediate ti(pre)
95. " " " " " "  = 2xux:1 *
tRNA translocation on the 70s ribosome: the post- translocational translocation intermediate ti(post)
96. " " " " " "  = 2y0v:1 *
The crystal structure of ef-tu and a9c-tRNA-trp bound to a near-cognate codon on the 70s ribosome
97. " " " " " "  = 2y0x:1 *
The crystal structure of ef-tu and a9c-tRNA-trp bound to a near-cognate codon on the 70s ribosome
98. " " " " " "  = 2y0z:1 *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a near-cognate codon on the 70s ribosome
99. " " " " " "  = 2y11:1 *
The crystal structure of ef-tu and trp-tRNA-trp bound to a cognate codon on the 70s ribosome.
100. " " " " " "  = 2y13:1 *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a near-cognate codon on the 70s ribosome
101. " " " " " "  = 2y15:1 *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a cognate codon on the 70s ribosome.
102. " " " " " "  = 2y17:1 *
Ef-tu complex 3
103. " " " " " "  = 2y19:1 *
The crystal structure of ef-tu and trp-tRNA-trp bound to a cognate codon on the 70s ribosome.
104. " " " " " "  = 3kir:1 *
Structure of rele nuclease bound to the 70s ribosome (precleavage state; part 2 of 4)
105. " " " " " "  = 3kit:1 *
Structure of rele nuclease bound to the 70s ribosome (precleavage state; part 4 of 4)
106. " " " " " "  = 3kiw:1 *
Structure of rele nuclease bound to the 70s ribosome (postcleavage state; part 2 of 4)
107. " " " " " "  = 3kiy:1 *
Structure of rele nuclease bound to the 70s ribosome (postcleavage state; part 4 of 4)
108. " " " " " "  = 4jux:1 *
Crystal structure of the ribosome bound to elongation factor guanosine triphosphatase state (this file contains the 50s
109. " " " " " "  = 4kbu:1 *
70s ribosome translocation intermediate gdpnp-ii containing factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains 50s ribosomal subunit a. The full asymmetric unit contains PDB entries 4kbt (30s subunit a), 4kbv (30s subuni 4kbw (50s subunit b).
110. " " " " " "  = 4kbw:1 *
70s ribosome translocation intermediate gdpnp-ii containing factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains 50s ribosomal subunit b. The full asymmetric unit contains PDB entries 4kbv (30s subunit b), 4kbt (30s subuni 4kbu (50s subunit a).
111. " " " " " "  = 4kcz:1 *
70s ribosome translocation intermediate gdpnp-i containing e factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state.T contains the 50s ribosomal subunit a. The 30s subunit a can in 4kcy. Molecule b in the same asymmetric unit is deposite (30s) and 4kd2 (50s).G1 50s ribosomal subunit i
112. " " " " " "  = 4kd2:1 *
70s ribosome translocation intermediate gdpnp-i containing e factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains the 50s ribosomal subunit b. The 30s subunit b can in 4kd0. Molecule a in the same asymmetric unit is deposite (30s) and 4kcz (50s).
113. " " " " " "  = 4kd9:1 *
70s ribosome translocation intermediate fa-3.6a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 50s ribosomal subunit a. The 30s su can be found in 4kd8. Molecule b in the same asymmetric uni deposited as 4kda (30s) and 4kdb (50s).
114. " " " " " "  = 4kdb:1 *
70s ribosome translocation intermediate fa-3.6a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 50s ribosomal subunit b. The 30s su can be found in 4kda. Molecule a in the same asymmetric uni deposited as 4kd8 (30s) and 4kd9 (50s).
115. " " " " " "  = 4kdh:1 *
70s ribosome translocation intermediate fa-4.2a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 50s ribosomal subunit a. The 30s su can be found in 4kdg. Molecule b in the same asymmetric uni deposited as 4kdj (30s) and 4kdk (50s).
116. " " " " " "  = 4kdk:1 *
70s ribosome translocation intermediate fa-4.2a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 50s ribosomal subunit b. The 30s su can be found in 4kdj. Molecule a in the same asymmetric uni deposited as 4kdg (30s) and 4kdh (50s).
117. 556 98.9% 89 89 719.2 4.4e-33 2j01:1 * Structure of the thermus thermophilus 70s ribosome complexed with mRNA, tRNA and paromomycin (part 2 of 4). This file contains the 50s subunit from molecule i.
118. " " " " " "  = 2j03:1 *
Structure of the thermus thermophilus 70s ribosome complexed with mRNA, tRNA and paromomycin (part 4 of 4). This file contains the 50s subunit from molecule ii.
119. " " " " " "  = 2v47:1 *
Structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mRNA, asl-phe and tRNA-fmet (part 2 of 4). This file contains the 50s subunit for molecule 1.
120. " " " " " "  = 2v49:1 *
Structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mRNA, asl-phe and tRNA-fmet (part 4 of 4). This file contains the 50s subunit of molecule 2.
121. " " " " " "  = 3fin:1 *
T. Thermophilus 70s ribosome in complex with mRNA, trnas and tu.Gdp.Kirromycin ternary complex, fitted to a 6.4 a cryo-e this file contains the 50s subunit.
122. " " " " " "  = 3oh5:1 *
Structure of the thermus thermophilus 70s ribosome complexed chloramphenicol. This file contains the 50s subunit of one ribosome. The entire crystal structure contains two 70s rib
123. " " " " " "  = 3oh7:1 *
Structure of the thermus thermophilus 70s ribosome complexed chloramphenicol. This file contains the 50s subunit of one ribosome. The entire crystal structure contains two 70s rib
124. " " " " " "  = 3ohj:1 *
Structure of the thermus thermophilus ribosome complexed wit erythromycin. This file contains the 50s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
125. " " " " " "  = 3ohk:1 *
Structure of the thermus thermophilus ribosome complexed wit erythromycin. This file contains the 50s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
126. " " " " " "  = 3ohz:1 *
Structure of the thermus thermophilus 70s ribosome complexed azithromycin. This file contains the 50s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
127. " " " " " "  = 3oi1:1 *
Structure of the thermus thermophilus 70s ribosome complexed azithromycin. This file contains the 50s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
128. " " " " " "  = 3oi3:1 *
Structure of the thermus thermophilus 70s ribosome complexed telithromycin. This file contains the 50s subunit of one 70 ribosome. The entire crystal structure contains two 70s rib
129. " " " " " "  = 3oi5:1 *
Structure of the thermus thermophilus 70s ribosome complexed telithromycin. This file contains the 50s subunit of one 70 ribosome. The entire crystal structure contains two 70s rib
130. 554 100.0% 88 88 716.7 6.1e-33 1vsa:V * Crystal structure of a 70s ribosome-tRNA complex reveals fun interactions and rearrangements. This file, 1vsa, contains ribosome subunit. 30s ribosome subunit is in the file 2ow8
131. " " " " " "  = 1vsp:V *
Interactions and dynamics of the shine-dalgarno helix in the ribosome. This file, 1vsp, contains the 50s ribosome subuni ribosome subunit is in the file 2qnh
132. " " " " " "  = 3d5b:1 *
Structural basis for translation termination on the 70s ribo file contains the 50s subunit of one 70s ribosome. The enti structure contains two 70s ribosomes as described in remark
133. " " " " " "  = 3d5d:1 *
Structural basis for translation termination on the 70s ribo file contains the 50s subunit of the second 70s ribosome. T crystal structure contains two 70s ribosomes as described i 400.
134. " " " " " "  = 3f1f:1 *
Crystal structure of a translation termination complex forme release factor rf2. This file contains the 50s subunit of o ribosome. The entire crystal structure contains two 70s rib described in remark 400.
135. " " " " " "  = 3f1h:1 *
Crystal structure of a translation termination complex forme release factor rf2. This file contains the 50s subunit of t 70s ribosome. The entire crystal structure contains two 70s as described in remark 400.
136. " " " " " "  = 3mrz:X *
Recognition of the amber stop codon by release factor rf1. T 3mrz contains 50s ribosomal subunit. The 30s ribosomal subu found in PDB entry 3ms0. Molecule a in the same asymmetric deposited as 3mr8 (50s) and 3ms1 (30s).
137. " " " " " "  = 3ms1:X *
Recognition of the amber stop codon by release factor rf1. T 3ms1 contains 50s ribosomal subunit. The 30s ribosomal subu found in PDB entry 3mr8. Molecule b in the same asymmetric deposited as 3mrz (50s) and 3ms0 (30s).
138. " " " " " "  = 3pyo:X *
Crystal structure of a complex containing domain 3 from the ires RNA bound to the 70s ribosome. This file contains the subunit of the first 70s ribosome.
139. " " " " " "  = 3pyr:X *
Crystal structure of a complex containing domain 3 from the ires RNA bound to the 70s ribosome. This file contains the subunit of the second 70s ribosome.
140. " " " " " "  = 3pyt:X *
Crystal structure of a complex containing domain 3 of crpv i RNA bound to the 70s ribosome. This file contains the 50s s the first 70s ribosome.
141. " " " " " "  = 3pyv:X *
Crystal structure of a complex containing domain 3 of crpv i RNA bound to the 70s ribosome. This file contains the 50s s the second 70s ribosome.
142. " " " " " "  = 4kfi:1 *
Crystal structure of the 70s ribosome bound with the q253p m release factor rf2. 50s of the a subunit
143. " " " " " "  = 4kfl:1 *
Crystal structure of the 70s ribosome bound with the q253p m release factor rf2. 50s of the b subunit
144. " " " " " "  = 4l6j:X *
Crystal structure of blasticidin s bound to thermus thermoph ribosome. This file contains the 50s subunit and blasticidi molecule from the first 70s ribosome.
145. " " " " " "  = 4l6l:X *
Crystal structure of blasticidin s bound to thermus thermoph ribosome. This file contains the 50s subunit and blasticidi molecule from the second 70s ribosome
146. 488 98.7% 78 78 633.6 2.6e-28 1vs9:V Crystal structure of a 70s ribosome-tRNA complex reveals functional interactions and rearrangements. This file, 1vs9, contains the 50s ribosome subunit. 30s ribosome subunit is in the file 2i1c
147. 479 100.0% 75 75 621.6 1.2e-27 2jl6:1 * Insights into translational termination from the structure of rf2 bound to the ribosome (part 2 of 4). This file contains the 50s subunit.
148. " " " " " "  = 2jl8:1 *
Insights into translational termination from the structure of rf2 bound to the ribosome (part 4 of 4). This file contains the 50s subunit.
149. 190 51.7% 58 72 255.8 2.8e-07 2zjp:U * Thiopeptide antibiotic nosiheptide bound to the large riboso subunit of deinococcus radiodurans
150. " " " " " "  = 2zjq:U *
Interaction of l7 with l11 induced by microccocin binding to deinococcus radiodurans 50s subunit
151. " " " " " "  = 2zjr:U *
Refined native structure of the large ribosomal subunit (50s) from deinococcus radiodurans
152. " " " " " "  = 3cf5:U *
Thiopeptide antibiotic thiostrepton bound to the large ribos subunit of deinococcus radiodurans
153. " " " " " "  = 3dll:U *
The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning
154. " " " " " "  = 3pio:U *
Crystal structure of the synergistic antibiotic pair lankamy lankacidin in complex with the large ribosomal subunit
155. " " " " " "  = 3pip:U *
Crystal structure of the synergistic antibiotic pair lankamy lankacidin in complex with the large ribosomal subunit
156. " " " " " "  = 4io9:U *
Crystal structure of compound 4d bound to large ribosomal su (50s) from deinococcus radiodurans
157. " " " " " "  = 4ioa:U *
Crystal structure of compound 4e bound to large ribosomal su (50s) from deinococcus radiodurans
158. " " " " " "  = 4ioc:U *
Crystal structure of compound 4f bound to large ribosomal su (50s) from deinococcus radiodurans
159. 94 25.4% 67 212 128.1 3.7 3zf7:K High-resolution cryo-electron microscopy structure of the tr brucei ribosome
160. 87 34.8% 66 77 122.2 7.9 2jz6:A Solution structure of 50s ribosomal protein l28 from thermotoga maritima. Northeast structural genomics consortium target vr97
161. 83 30.6% 72 170 115.4 19 3st9:A Crystal structure of clpp in heptameric form from staphyloco aureus
162. 80 34.2% 73 146 112.4 28 1ri7:A * Crystal structure of a protein in the lrp/asnc family from t hyperthermophilic archaeon pyrococcus sp. Ot3
163. " " " " " "  = 2zny:A *
Crystal structure of the ffrp
164. " " " " " "  = 2znz:A *
Crystal structure of ffrp
165. 80 34.2% 73 147 112.3 28 2e1c:A Structure of putative hth-type transcriptional regulator ph1 complex
166. 80 34.2% 73 151 112.2 28 2cyy:A Crystal structure of ph1519 from pyrococcus horikosii ot3
167. 101 33.8% 65 77 112.0 29 1vt2:X * Crystal structure of the e. Coli ribosome bound to cem-101. Contains the 50s subunit of the second 70s ribosome.
168. " " " " " "  = 2i2t:X *
Crystal structure of ribosome with messenger RNA and the anticodon stem-loop of p-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
169. " " " " " "  = 2i2v:X *
Crystal structure of ribosome with messenger RNA and the anticodon stem-loop of p-site tRNA. This file contains the 50s subunit of one 70s ribosome. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
170. " " " " " "  = 2qam:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with neomycin. This file contains the 50s subunit of the first 70s ribosome, with neomycin bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
171. " " " " " "  = 2qao:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with neomycin. This file contains the 50s subunit of the second 70s ribosome, with neomycin bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
172. " " " " " "  = 2qba:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with gentamicin. This file contains the 50s subunit of the first 70s ribosome, with gentamicin bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
173. " " " " " "  = 2qbc:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with gentamicin. This file contains the 50s subunit of the second 70s ribosome, with gentamicin bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
174. " " " " " "  = 2qbe:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). This file contains the 50s subunit of the first 70s ribosome, with rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
175. " " " " " "  = 2qbg:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with ribosome recycling factor (rrf). This file contains the 50s subunit of the second 70s ribosome, with rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
176. " " " " " "  = 2qbi:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with gentamicin and ribosome recycling factor (rrf). This file contains the 50s subunit of the first 70s ribosome, with gentamicin and rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
177. " " " " " "  = 2qbk:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with gentamicin and ribosome recycling factor (rrf). This file contains the 50s subunit of the second 70s ribosome, with gentamicin and rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
178. " " " " " "  = 2qov:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with spectinomycin. This file contains the 50s subunit of the first 70s ribosome. The entire crystal structure contains two 70s ribosomes.
179. " " " " " "  = 2qox:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with spectinomycin. This file contains the 50s subunit of the second 70s ribosome. The entire crystal structure contains two 70s ribosomes.
180. " " " " " "  = 2qoz:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with spectinomycin and neomycin. This file contains the 50s subunit of the first 70s ribosome, with neomycin bound. The entire crystal structure contains two 70s ribosomes.
181. " " " " " "  = 2qp1:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with spectinomycin and neomycin. This file contains the 50s subunit of the second 70s ribosome, with neomycin bound. The entire crystal structure contains two 70s ribosomes.
182. " " " " " "  = 2wwq:0 *
E.Coli 70s ribosome stalled during translation of tnac leader peptide. This file contains the 50s, the p-site tRNA and the tnac leader peptide (part 2 of 2).
183. " " " " " "  = 2z4l:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with paromomycin and ribosome recycling factor (rrf). This file contains the 50s subunit of the first 70s ribosome, with paromomycin and rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
184. " " " " " "  = 2z4n:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with paromomycin and ribosome recycling factor (rrf). This file contains the 50s subunit of the second 70s ribosome, with paromomycin and rrf bound. The entire crystal structure contains two 70s ribosomes and is described in remark 400.
185. " " " " " "  = 3df2:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. This file contains the 50s subunit of the first 70s ribosome. The entire crystal structure contains two 70s ribosomes.
186. " " " " " "  = 3df4:Z *
Crystal structure of the bacterial ribosome from escherichia coli in complex with hygromycin b. This file contains the 50s subunit of the second 70s ribosome. The entire crystal structure contains two 70s ribosomes.
187. " " " " " "  = 3fik:X *
Ternary complex-bound e.Coli 70s ribosome. This entry consis 50s subunit.
188. " " " " " "  = 3i1n:X *
Crystal structure of the e. Coli 70s ribosome in an intermediate state of ratcheting
189. " " " " " "  = 3i1p:X *
Crystal structure of the e. Coli 70s ribosome in an intermediate state of ratcheting
190. " " " " " "  = 3i1r:X *
Crystal structure of the e. Coli 70s ribosome in an intermed of ratcheting
191. " " " " " "  = 3i1t:X *
Crystal structure of the e. Coli 70s ribosome in an intermed of ratcheting
192. " " " " " "  = 3i20:X *
Crystal structure of the e. Coli 70s ribosome in an intermediate state of ratcheting
193. " " " " " "  = 3i22:X *
Crystal structure of the e. Coli 70s ribosome in an intermediate state of ratcheting
194. " " " " " "  = 3izt:Y *
Structural insights into cognate vs. Near-cognate discrimina during decoding. This entry contains the large subunit of a programmed with a near-cognate codon.
195. " " " " " "  = 3izu:Y *
Structural insights into cognate vs. Near-cognate discrimina during decoding. This entry contains the large subunit of a programmed with a cognate codon
196. " " " " " "  = 3j01:X *
Structure of the ribosome-secye complex in the membrane envi
197. " " " " " "  = 3j0t:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class2 of the six classes)
198. " " " " " "  = 3j0w:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class 4a of the six classes)
199. " " " " " "  = 3j0y:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class 4b of the six classes)
200. " " " " " "  = 3j11:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class 3 of the six classes)
201. " " " " " "  = 3j12:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class 5 of the six classes)
202. " " " " " "  = 3j14:Z *
Structural characterization of mRNA-tRNA translocation inter (50s ribosome of class 6 of the six classes)
203. " " " " " "  = 3j19:X *
Structure of the bacterial ribosome complexed by tmrna-smpb during translocation and mld-loading (50s subunit)
204. " " " " " "  = 3j37:1 *
Tetracycline resistance protein tet(o) bound to the ribosome
205. " " " " " "  = 3j4x:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in classic pre- translocation state (pre1b, 50s subunit)
206. " " " " " "  = 3j50:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (pre2, 50s subunit)
207. " " " " " "  = 3j51:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (pre3, 50s subunit)
208. " " " " " "  = 3j52:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in classic pre- translocation state (pre1a, 50s subunit)
209. " " " " " "  = 3j54:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in hybrid pre- translocation state (pre4, 50s subunit)
210. " " " " " "  = 3j56:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in hybrid pre- translocation state (pre5a, 50s subunit)
211. " " " " " "  = 3j58:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in hybrid pre- translocation state (pre5b, 50s subunit)
212. " " " " " "  = 3j5a:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in classic post translocation state (post1, 50s subunit)
213. " " " " " "  = 3j5c:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (post2a, 50s subunit)
214. " " " " " "  = 3j5e:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (post2b, 50s subunit)
215. " " " " " "  = 3j5g:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (post3a, 50s subunit)
216. " " " " " "  = 3j5i:X *
E. Coli 70s-fmetval-trnaval-trnafmet complex in intermediate translocation state (post3b, 50s subunit)
217. " " " " " "  = 3j5k:X *
E. Coli 70s-fmetval-trnaval post-translocation complex (post subunit)
218. " " " " " "  = 3j5o:X *
Visualization of two trnas trapped in transit during ef-g-me translocation (50s subunit)
219. " " " " " "  = 3j5u:Z *
Structure of the ribosome with elongation factor g trapped i translocation state (pre-translocation 70s tRNA structure, subunit)
220. " " " " " "  = 3j5w:1 *
Structure of the ribosome with elongation factor g trapped i translocation state (pre-translocation 70s tRNA Ef-g struct subunit)
221. " " " " " "  = 3kcr:X *
Ribosome-secy complex. This entry 3kcr contains 50s ribosomal subnit. The 30s ribosomal subunit can be found in PDB entry 3kc4
222. " " " " " "  = 3oas:X *
Crystal structure of the e. Coli ribosome bound to telithrom file contains the 50s subunit of the second 70s ribosome.
223. " " " " " "  = 3oat:X *
Crystal structure of the e. Coli ribosome bound to telithrom file contains the 50s subunit of the first 70s ribosome wit telithromycin bound.
224. " " " " " "  = 3ofc:X *
Crystal structure of the e. Coli ribosome bound to chloramph this file contains the 50s subunit of the first 70s ribosom chloramphenicol bound.
225. " " " " " "  = 3ofd:X *
Crystal structure of the e. Coli ribosome bound to chloramph this file contains the 50s subunit of the second 70s riboso
226. " " " " " "  = 3ofq:X *
Crystal structure of the e. Coli ribosome bound to erythromy file contains the 50s subunit of the second 70s ribosome.
227. " " " " " "  = 3ofr:X *
Crystal structure of the e. Coli ribosome bound to erythromy file contains the 50s subunit of the first 70s ribosome wit erthromycin bound.
228. " " " " " "  = 3ofz:X *
Crystal structure of the e. Coli ribosome bound to clindamyc file contains the 50s subunit of the first 70s ribosome bou clindamycin.
229. " " " " " "  = 3og0:X *
Crystal structure of the e. Coli ribosome bound to clindamyc file contains the 50s subunit of the second 70s ribosome.
230. " " " " " "  = 3orb:X *
Crystal structure of the e. Coli ribosome bound to cem-101. Contains the 50s subunit of the first 70s ribosome bound to
231. " " " " " "  = 3r8s:X *
Structures of the bacterial ribosome in classical and hybrid tRNA binding
232. " " " " " "  = 3r8t:X *
Structures of the bacterial ribosome in classical and hybrid tRNA binding
233. " " " " " "  = 3sgf:1 *
Crystal structure of release factor rf3 trapped in the gtp s rotated conformation of the ribosome
234. " " " " " "  = 3uos:1 *
Crystal structure of release factor rf3 trapped in the gtp s rotated conformation of the ribosome (without viomycin)
235. " " " " " "  = 4gar:X *
Allosteric control of the ribosome by small-molecule antibio
236. " " " " " "  = 4gau:X *
Allosteric control of the ribosome by small-molecule antibio
237. " " " " " "  = 4kix:X *
Control of ribosomal subunit rotation by elongation factor g
238. " " " " " "  = 4kiz:X *
Control of ribosomal subunit rotation by elongation factor g
239. " " " " " "  = 4kj1:X *
Control of ribosomal subunit rotation by elongation factor g
240. " " " " " "  = 4kj3:X *
Control of ribosomal subunit rotation by elongation factor g
241. " " " " " "  = 4kj5:X *
Control of ribosomal subunit rotation by elongation factor g
242. " " " " " "  = 4kj7:X *
Control of ribosomal subunit rotation by elongation factor g
243. " " " " " "  = 4kj9:X *
Control of ribosomal subunit rotation by elongation factor g
244. " " " " " "  = 4kjb:X *
Control of ribosomal subunit rotation by elongation factor g
245. " " " " " "  = 4peb:X *
Crystal structure of the e. Coli ribosome bound to quinupris file contains the 50s subunit of the first 70s ribosome wit quinupristin bound.
246. " " " " " "  = 4pec:X *
Crystal structure of the e. Coli ribosome bound to quinupris file contains the 50s subunit of the second 70s ribosome wi quinupristin bound.
247. " " " " " "  = 4tom:X *
Crystal structure of the e. Coli ribosome bound to linoprist file contains the 50s subunit of the first 70s ribosome wit linopristin bound.
248. " " " " " "  = 4too:X *
Crystal structure of the e. Coli ribosome bound to linoprist file contains the 50s subunit of the second 70s ribosome wi linopristin bound.
249. " " " " " "  = 4tov:X *
Crystal structure of the e. Coli ribosome bound to flopristi file contains the 50s subunit of the first 70s ribosome wit flopristin bound.
250. " " " " " "  = 4tox:X *
Crystal structure of the e. Coli ribosome bound to flopristi file contains the 50s subunit of the second 70s ribosome wi flopristin bound.
251. " " " " " "  = 4tp1:X *
Crystal structure of the e. Coli ribosome bound to dalfopris file contains the 50s subunit of the first 70s ribosome wit dalfopristin bound.
252. " " " " " "  = 4tp3:X *
Crystal structure of the e. Coli ribosome bound to dalfopris file contains the 50s subunit of the second 70s ribosome wi dalfopristin bound.
253. " " " " " "  = 4tp5:X *
Crystal structure of the e. Coli ribosome bound to virginiam this file contains the 50s subunit of the first 70s ribosom virginiamycin m1 bound.
254. " " " " " "  = 4tp7:X *
Crystal structure of the e. Coli ribosome bound to virginiam this file contains the 50s subunit of the second 70s riboso virginiamycin m1 bound.
255. " " " " " "  = 4tp9:X *
Crystal structure of the e. Coli ribosome bound to dalfopris quinupristin. This file contains the 50s subunit of the fir ribosome with dalfopristin and quinupristin bound.
256. " " " " " "  = 4tpb:X *
Crystal structure of the e. Coli ribosome bound to dalfopris quinupristin. This file contains the 50s subunit of the sec ribosome with dalfopristin and quinupristin bound.
257. " " " " " "  = 4tpd:X *
Crystal structure of the e. Coli ribosome bound to flopristi linopristin. This file contains the 50s subunit of the firs ribosome with flopristin and linopristin bound.
258. " " " " " "  = 4tpf:X *
Crystal structure of the e. Coli ribosome bound to flopristi linopristin. This file contains the 50s subunit of the seco ribosome with flopristin and linopristin bound.
259. 76 34.3% 67 116 108.5 45 1yv0:I Crystal structure of skeletal muscle troponin in the ca2+- free state

Number of sequences: 259

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Annotation parameters

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Min. seq. identity:   Min. seq. overlap   Max. E-value

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