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SAS results for UniProt accession no. P41057

Sequence annotated by structure

Key:
Sec. struc: By homology
  Helix Strand  
Residue contacts:   to DNA/RNA   to metal
Active sites:   (from PDB SITE records)

Secondary structure shown in red comes from a homologous protein structure which is at least 30% sequence identical to the target protein and has an alignment overlap of at least 80 residues or at least three-quarters of the length of the target sequence (whichever overlap is the larger).

Click on annotated residues to get source(s) of each annotation.

 

FASTA alignment for UniProt accession no. P41057 - coloured by no. of contacts to ligand

Below are the FASTA results from a search of the sequence of UniProt accession no. P41057 against all protein sequences in the PDB. Identical sequences are grouped together and represented by a single 'consensus' sequence (asterisked) onto which all relevant annotations are mapped. The number of sequences represented by each consensus sequence is shown by the '×n' on the right of the alignment. Use the box below to modify the annotations shown on the alignment. At the bottom of the page are given the FASTA stats for all the sequences. There you can exclude any sequences from the alignment.

Struct

FASTA

The search returned 34 unique sequences (including 13 consensus sequences) giving 292 sequence matches in all. The 257 sequences excluded from the alignment are listed at the end.

Modify alignment: Annotate by:
  Number:  
  Show secondary structure: Yes No  


                1         2         3         4         5         6     
       12345678901234567890123456789012345678901234567890123456789012345   Protein name
       ---------+---------+---------+---------+---------+---------+-----   ------------
P41057 ------------mahenvwfshprrygkgsrqcrvcsshtglirkyglnicrqcfrekandigfn   40S ribosomal protein S29-A OS=Saccharomyces cerevisiae  ...
3u5c:d*---------------envwfshprrygkgsrqcrvcsshtglirkyglnicrqcfrekandigfn×4 The structure of the eukaryotic ribosome at 3.0 a  ...
3izb:N --------------------shprrygkgsrqcrvcsshtglirkyglnicrqcfrekandigfn   Localization of the small subunit ribosomal proteins into a  ...
3jyv:N ----------------nvwfshprrfgkgsrqcrvcsshtglvrkydlnicrqcfrekandigfh   Structure of the 40s rrna and proteins and p/e tRNA for  ...
3j38:d ----------------tlwyshprkygqgsrccracsnrhglirkyglnicrqcfreyandigfk   Structure of the d. Melanogaster 40s ribosomal proteins
3o2z:S*--------------------------gkgsrqcrvcsshtglirkyglnicrqcfrekandigfn×2 Yeast 80s ribosome. This entry consists of the 40s subunit  ...
3j3a:d*---------------qqlywshprkfgqgsrscrvcsnrhglirkyglnmcrqcfrqyakdigfi×4 Structure of the human 40s ribosomal proteins
2zkq:n -----------------lywshprkfgqgsrscrvcsnrhglirkyglnmcrqcfrqyakdigfi   Structure of a mammalian ribosomal 40s subunit within an  ...
4w23:d*---------------gfyw-shprkfgqgsrscrvcsnrhglirkyglnmcrqcfrqyakdigfi×2 Structure of the 80s mammalian ribosome bound to eef2 (this  ...
3j7a:T --------------------vhpkkygqgsrqcrvcsnkhaiirkyninicrqcfreradiigfk   Cryo-em structure of the plasmodium falciparum 80s ribosome  ...
3iz6:N*--------------------shpknygagsrvcrvcgnshglirkyglmccrqcfrsdakdigfi×2 Localization of the small subunit ribosomal proteins into a  ...
2xzm:N*---------------nklwrthprnygkdskecrvcgarqglitkyemmtcrrcfreqaphigfv×2 Crystal structure of the eukaryotic 40s ribosomal subunit  ...
4bpe:N*--------------pnklwrthprnygkdskecrvcgarqglitkyemmtcrrcfreqaphigfv×4 The crystal structure of the eukaryotic 40s ribosomal  ...
3zey:8 --------------------------gkgsrhcvicsnqkavirkyelnvcrqcfrenaanigfs   High-resolution cryo-electron microscopy structure of the  ...
1k5x:N*--------------------------------crvcsshtglvrkydlnicrqcfrekand----×2 Structure of the translating 80s ribosome from yeast,  ...
3j20:P*------------makadynkrkprkfgkgarrcircgqygpiiriqglmlcrhcfrevapklgfr×2 Promiscuous behavior of proteins in archaeal ribosomes  ...
2ers:A ----itcpppmsvehadiwv---ksyslysreryicns--gfkrkagtssltecvlnkatnvahw   Solution structure of the interleukin-15 receptor sushi  ...
4gs7:D ----itcpppmsvehadiwv---ksyslysreryicns--gfkrkagtssltecvlnkatnvahw   Structure of the interleukin-15 quaternary complex
2z3r:B ---sitcpppmsvehadiwv---ksyslysreryicns--gfkrkagtssltecvlnkatnvahw   Crystal structure of the il-15/il-15ra complex
2z3q:D maisitcpppmsvehadiwv---ksyslysreryicns--gfkrkagtssltecvlnkatnvahw   Crystal structure of the il-15/il-15ra complex
2z3r:D maisitcpppmsvehadiwv---ksyslysreryicns--gfkrkagtssltecvlnkatnvahw   Crystal structure of the il-15/il-15ra complex

                        
           7         8  
       67890123456789012                                                   Protein name
       ----+---------+--                                                   ------------
P41057 kfr--------------                                                   40S ribosomal protein S29-A OS=Saccharomyces cerevisiae  ...
3u5c:d*kfr--------------                                                ×4 The structure of the eukaryotic ribosome at 3.0 a  ...
3izb:N kfr--------------                                                   Localization of the small subunit ribosomal proteins into a  ...
3jyv:N k----------------                                                   Structure of the 40s rrna and proteins and p/e tRNA for  ...
3j38:d kld--------------                                                   Structure of the d. Melanogaster 40s ribosomal proteins
3o2z:S*-----------------                                                ×2 Yeast 80s ribosome. This entry consists of the 40s subunit  ...
3j3a:d*kld--------------                                                ×4 Structure of the human 40s ribosomal proteins
2zkq:n k----------------                                                   Structure of a mammalian ribosomal 40s subunit within an  ...
4w23:d*kld--------------                                                ×2 Structure of the 80s mammalian ribosome bound to eef2 (this  ...
3j7a:T kyr--------------                                                   Cryo-em structure of the plasmodium falciparum 80s ribosome  ...
3iz6:N*kyr--------------                                                ×2 Localization of the small subunit ribosomal proteins into a  ...
2xzm:N*kyr--------------                                                ×2 Crystal structure of the eukaryotic 40s ribosomal subunit  ...
4bpe:N*kyr--------------                                                ×4 The crystal structure of the eukaryotic 40s ribosomal  ...
3zey:8 klr--------------                                                   High-resolution cryo-electron microscopy structure of the  ...
1k5x:N*-----------------                                                ×2 Structure of the translating 80s ribosome from yeast,  ...
3j20:P*kye--------------                                                ×2 Promiscuous behavior of proteins in archaeal ribosomes  ...
2ers:A ttpslkcird-------                                                   Solution structure of the interleukin-15 receptor sushi  ...
4gs7:D ttpslkcirdp------                                                   Structure of the interleukin-15 quaternary complex
2z3r:B ttpslkcirdpalvhqr                                                   Crystal structure of the il-15/il-15ra complex
2z3q:D ttpslkcirdpalvhqr                                                   Crystal structure of the il-15/il-15ra complex
2z3r:D ttpslkcirdpalvhq-                                                   Crystal structure of the il-15/il-15ra complex

Residue colours: black = 0, purple = 1, blue = 2, green = 3, orange = 4, red = 5 or more contacts.

Sequence listing

The listing below shows the FASTA statistics for the PDB entries that matched UniProt accession no. P41057. Ditto marks indicate identical sequences represented by a single representative sequence in the alignment above. The representative is asterisked and the names of all its duplicate sequences are indented to the right.

Structures whose names are given in purple are those that are annotated above. The parameters defining which sequences can transfer their annotations are shown at the bottom of the page where they can be altered and the alignment regenerated.

Use the checkboxes to the left of the PDB codes to exclude any sequences from the alignment (or to add back any sequences in the Excluded list). Then click the SELECT button at the bottom of the page to redisplay the alignment.

Aligned sequences

  Smith-
Waterman
score
%-tage
identity
a.a.
overlap
Seq
len
z-score E-
value
  PDB
code
Protein name
1. - - - 56 - - P41057 40S ribosomal protein S29-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPS29A PE=1 SV=3
2. 392 100.0% 53 53 550.3 1.1e-23 3u5c:d * The structure of the eukaryotic ribosome at 3.0 a resolution entry contains proteins of the 40s subunit, ribosome a
3. " " " " " "  = 3u5g:d *
The structure of the eukaryotic ribosome at 3.0 a resolution entry contains proteins of the 40s subunit, ribosome b
4. " " " " " "  = 4byl:3 *
Cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic translation initiation complex
5. " " " " " "  = 4byt:3 *
Cryo-em reconstruction of the 80s-eif5b-met-itrnamet eukaryotic translation initiation complex
6. 351 100.0% 48 48 495.0 1.3e-20 3izb:N Localization of the small subunit ribosomal proteins into a cryo-em map of saccharomyces cerevisiae translating 80s rib
7. 351 92.0% 50 50 494.8 1.4e-20 3jyv:N Structure of the 40s rrna and proteins and p/e tRNA for euka ribosome based on cryo-em map of thermomyces lanuginosus ri 8.9a resolution
8. 298 76.0% 50 52 422.6 1.4e-16 3j38:d Structure of the d. Melanogaster 40s ribosomal proteins
9. 283 100.0% 39 39 403.5 1.7e-15 3o2z:S * Yeast 80s ribosome. This entry consists of the 40s subunit o first 80s in the asymmetric unit.
10. " " " " " "  = 3o30:S *
Yeast 80s ribosome. This entry consists of the 40s subunit o second 80s in the asymmetric unit.
11. 271 65.4% 52 53 385.9 1.6e-14 3j3a:d * Structure of the human 40s ribosomal proteins
12. " " " " " "  = 4kzx:d *
Rabbit 40s ribosomal subunit in complex with eif1.
13. " " " " " "  = 4kzy:d *
Rabbit 40s ribosomal subunit in complex with eif1 and eif1a.
14. " " " " " "  = 4kzz:d *
Rabbit 40s ribosomal subunit in complex with mRNA, initiator eif1a
15. 268 69.4% 49 49 382.1 2.6e-14 2zkq:n Structure of a mammalian ribosomal 40s subunit within an 80s obtained by docking homology models of the RNA and proteins 8.7 a cryo-em map
16. 268 71.4% 49 52 381.9 2.7e-14 4w23:d * Structure of the 80s mammalian ribosome bound to eef2 (this contains the small ribosomal subunit)
17. " " " " " "  = 4w28:d *
Structure of the translating mammalian ribosome-sec61 comple entry contains the small ribosomal subunit)
18. 260 68.1% 47 48 371.4 1e-13 3j7a:T Cryo-em structure of the plasmodium falciparum 80s ribosome the anti-protozoan drug emetine, small subunit
19. 244 68.8% 48 48 349.6 1.7e-12 3iz6:N * Localization of the small subunit ribosomal proteins into a cryo-em map of triticum aestivum translating 80s ribosome
20. " " " " " "  = 3j60:d *
Localization of the small subunit ribosomal proteins into a cryo-em map of triticum aestivum translating 80s ribosome
21. 232 56.9% 51 53 332.9 1.5e-11 2xzm:N * Crystal structure of the eukaryotic 40s ribosomal subunit in complex with initiation factor 1. This file contains the 40s subunit and initiation factor for molecule 1
22. " " " " " "  = 2xzn:N *
Crystal structure of the eukaryotic 40s ribosomal subunit in complex with initiation factor 1. This file contains the 40s subunit and initiation factor for molecule 2
23. 232 56.9% 51 54 332.8 1.5e-11 4bpe:N * The crystal structure of the eukaryotic 40s ribosomal subuni complex with eif1 and eif1a - complex 1
24. " " " " " "  = 4bpn:N *
The crystal structure of the eukaryotic 40s ribosomal subuni complex with eif1 and eif1a - complex 2
25. " " " " " "  = 4bpo:N *
The crystal structure of the eukaryotic 40s ribosomal subuni complex with eif1 and eif1a - complex 3
26. " " " " " "  = 4bpp:N *
The crystal structure of the eukaryotic 40s ribosomal subuni complex with eif1 and eif1a - complex 4
27. 211 64.3% 42 42 305.4 4.9e-10 3zey:8 High-resolution cryo-electron microscopy structure of the tr brucei ribosome
28. 204 93.1% 29 29 297.5 1.4e-09 1k5x:N * Structure of the translating 80s ribosome from yeast, obtained by docking atomic models for RNA and protein components into a 15a cryo-em map. This file 1k5x contains the 40s ribosomal subunit, the p-site bound tRNA and the mRNA codon. The file 1k5y contains the 60s ribosomal subunit.
29. " " " " " "  = 1s1h:N *
Structure of the ribosomal 80s-eef2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 a cryo-em map. This file, 1s1h, contains 40s subunit. The 60s ribosomal subunit is in file 1s1i.
30. 179 43.6% 55 56 260.6 1.5e-07 3j20:P * Promiscuous behavior of proteins in archaeal ribosomes revea cryo-em: implications for evolution of eukaryotic ribosomes ribosomal subunit)
31. " " " " " "  = 3j43:P *
Structure of the methanococcus jannaschii ribosome-secyebeta complex (30s ribosomal subunit)
32. 82 29.2% 48 66 128.0 3.7 2ers:A Solution structure of the interleukin-15 receptor sushi domain
33. 82 29.2% 48 67 128.0 3.7 4gs7:D Structure of the interleukin-15 quaternary complex
34. 82 29.2% 48 74 127.5 4 2z3r:B Crystal structure of the il-15/il-15ra complex
35. 82 29.2% 48 77 127.4 4.1 2z3q:D Crystal structure of the il-15/il-15ra complex
36. 82 29.2% 48 76 127.4 4 2z3r:D Crystal structure of the il-15/il-15ra complex

Number of sequences: 36

Excluded sequences

  Smith-
Waterman
score
%-tage
identity
a.a.
overlap
Seq
len
z-score E-
value
  PDB
code
Protein name
1. 82 29.2% 48 81 127.1 4.2 2z3q:B Crystal structure of the il-15/il-15ra complex
2. 83 37.1% 35 151 125.7 5 3qrz:A Crystal structure of native abscisic acid receptor pyl5 at 2 angstrom
3. 83 37.1% 35 153 125.7 5 4jdl:A Crystal structure of native abscisic acid receptor pyl5 at 2 angstrom
4. 87 35.0% 40 677 124.5 5.9 1h76:A The crystal structure of diferric porcine serum transferrin
5. 77 32.6% 43 110 119.0 12 2csh:A Solution structure of tandem repeat of the zf-c2h2 domains of human zinc finger protein 297b
6. 74 31.6% 38 58 117.7 14 3uz6:Q * Structure analysis of ribosomal decoding. This entry contain ribosomal subunit of the first 70s molecule in the asymmetr for the cognate tRNA-tyr complex
7. " " " " " "  = 3uz7:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the second 70s molecule in the asymmetric unit for the cognate tRNA-tyr complex.
8. " " " " " "  = 3uzg:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-tyr complex
9. " " " " " "  = 3uzi:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-tyr complex
10. " " " " " "  = 3uzl:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-tyr complex with paromomycin
11. " " " " " "  = 3uzm:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-tyr complex with paromomycin
12. 74 31.6% 38 59 117.7 14 4dh9:N * Crystal structure of yaej bound to the 70s ribosome
13. " " " " " "  = 4dhb:N *
Crystal structure of yaej bound to the 70s ribosome
14. 74 31.6% 38 60 117.6 14 1fjf:N * Structure of the thermus thermophilus 30s ribosomal subunit
15. " " " " " "  = 1fjg:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with the antibiotics streptomycin, spectinomycin, and paromomycin
16. " " " " " "  = 1gix:Q *
Crystal structure of the ribosome at 5.5 a resolution. This 1gix, contains the 30s ribosome subunit, three tRNA, and mr molecules. 50s ribosome subunit is in the file 1giy
17. " " " " " "  = 1hnw:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with tetracycline
18. " " " " " "  = 1hnx:N *
Structure of the thermus thermophilus 30s ribosomal subunit with pactamycin
19. " " " " " "  = 1hnz:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with hygromycin b
20. " " " " " "  = 1hr0:N *
Crystal structure of initiation factor if1 bound to the 30s ribosomal subunit
21. " " " " " "  = 1i94:N *
Crystal structures of the small ribosomal subunit with tetracycline, edeine and if3
22. " " " " " "  = 1i95:N *
Crystal structure of the 30s ribosomal subunit from thermus thermophilus in complex with edeine
23. " " " " " "  = 1i96:N *
Crystal structure of the 30s ribosomal subunit from thermus thermophilus in complex with the translation initiation factor if3 (c-terminal domain)
24. " " " " " "  = 1i97:N *
Crystal structure of the 30s ribosomal subunit from thermus thermophilus in complex with tetracycline
25. " " " " " "  = 1ibk:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with the antibiotic paromomycin
26. " " " " " "  = 1ibl:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with a messenger RNA fragment and cognate transfer RNA anticodon stem-loop bound at the a site and with the antibiotic paromomycin
27. " " " " " "  = 1ibm:N *
Structure of the thermus thermophilus 30s ribosomal subunit in complex with a messenger RNA fragment and cognate transfer RNA anticodon stem-loop bound at the a site
28. " " " " " "  = 1j5e:N *
Structure of the thermus thermophilus 30s ribosomal subunit
29. " " " " " "  = 1jgo:Q *
The path of messenger RNA through the ribosome. This file, 1 contains the 30s ribosome subunit, three tRNA, and mRNA mol 50s ribosome subunit is in the file 1giy
30. " " " " " "  = 1jgp:Q *
The path of messenger RNA through the ribosome. This file, 1 contains the 30s ribosome subunit, three tRNA, and mRNA mol 50s ribosome subunit is in the file 1giy
31. " " " " " "  = 1jgq:Q *
The path of messenger RNA through the ribosome. This file, 1 contains the 30s ribosome subunit, three tRNA, and mRNA mol 50s ribosome subunit is in the file 1giy
32. " " " " " "  = 1l1u:N *
Ternary complex docked in the decoding site of the 30s ribosomal subunit
33. " " " " " "  = 1ml5:Q *
Structure of the e. Coli ribosomal termination complex with factor 2
34. " " " " " "  = 1n32:N *
Structure of the thermus thermophilus 30s ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin
35. " " " " " "  = 1n33:N *
Structure of the thermus thermophilus 30s ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position at the a site with paromomycin
36. " " " " " "  = 1n34:N *
Structure of the thermus thermophilus 30s ribosomal subunit in the presence of codon and crystallographically disordered near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position
37. " " " " " "  = 1n36:N *
Structure of the thermus thermophilus 30s ribosomal subunit in the presence of crystallographically disordered codon and near-cognate transfer RNA anticodon stem-loop mismatched at the second codon position
38. " " " " " "  = 1pns:N *
Crystal structure of a streptomycin dependent ribosome from e. Coli, 30s subunit of 70s ribosome. This file, 1pns, contains the 30s subunit, two trnas, and one mRNA molecule. The 50s ribosomal subunit is in file 1pnu.
39. " " " " " "  = 1pnx:N *
Crystal structure of the wild type ribosome from e. Coli, 30s subunit of 70s ribosome. This file, 1pnx, contains only molecules of the 30s ribosomal subunit. The 50s subunit is in the PDB file 1pny.
40. " " " " " "  = 1twt:Q *
Model structure of the t. Thermophilus 70s ribosome, 30s subunit of 70s robosome. This file, 1twt, contains only molecules of the 30s ribosomal subunit. The 50s subunit is in the PDB file 1twv.
41. " " " " " "  = 1voq:N *
Crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
42. " " " " " "  = 1vos:N *
Crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
43. " " " " " "  = 1vov:N *
Crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
44. " " " " " "  = 1vox:N *
Crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
45. " " " " " "  = 1voz:N *
Crystal structure of five 70s ribosomes from escherichia coli in complex with protein y. This file contains the 30s subunit of one 70s ribosome. The entire crystal structure contains five 70s ribosomes and is described in remark 400.
46. " " " " " "  = 1vvl:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u on the ribosome
47. " " " " " "  = 1vvn:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u on the ribosome
48. " " " " " "  = 1vvp:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-a on the ribosome
49. " " " " " "  = 1vvr:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-a on the ribosome
50. " " " " " "  = 1vvt:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccg-g on the ribosome
51. " " " " " "  = 1vvv:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccg-g on the ribosome
52. " " " " " "  = 1vvx:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u in the absence of paromomycin
53. " " " " " "  = 1vvz:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-u in the absence of paromomycin
54. " " " " " "  = 1vx8:N *
Crystal structure of tRNA proline (cgg) bound to codon ccc-u ribosome
55. " " " " " "  = 1vxi:N *
Crystal structure of tRNA proline (cgg) bound to codon ccc-u ribosome
56. " " " " " "  = 1vxk:N *
Crystal structure of tRNA proline (cgg) bound to codon ccg-g ribosome
57. " " " " " "  = 1vxm:N *
Crystal structure of tRNA proline (cgg) bound to codon ccg-g ribosome
58. " " " " " "  = 1vxp:N *
Crystal structure of tRNA proline (cgg) bound to codon ccc-g ribosome
59. " " " " " "  = 1vxs:N *
Crystal structure of tRNA proline (cgg) bound to codon ccc-g ribosome
60. " " " " " "  = 1vy0:N *
Crystal structure of unmodified tRNA proline (cgg) bound to on the ribosome
61. " " " " " "  = 1vy2:N *
Crystal structure of unmodified tRNA proline (cgg) bound to on the ribosome
62. " " " " " "  = 1xmo:N *
Crystal structure of mnm5u34t6a37-trnalysuuu complexed with in the decoding center
63. " " " " " "  = 1xmq:N *
Crystal structure of t6a37-asllysuuu aaa-mRNA bound to the d center
64. " " " " " "  = 1xnq:N *
Structure of an inosine-adenine wobble base pair complex in the context of the decoding center
65. " " " " " "  = 1xnr:N *
Crystal structure of an inosine-cytosine wobble base pair in the context of the decoding center
66. " " " " " "  = 1yl4:Q *
Crystal structure of 70s ribosome with thrs operator and trn subunit. The coordinates for the 50s subunit are in the PDB 1yl3
67. " " " " " "  = 2b64:N *
30s ribosomal subunit, trnas, mRNA and release factor rf1 fr crystal structure of the whole ribosomal complex. This file the 30s subunit, trnas, mRNA and release factor rf1 from a structure of the whole ribosomal complex". The entire cryst structure contains one 70s ribosome, trnas, mRNA and releas rf1 and is described in remark 400.
68. " " " " " "  = 2b9m:N *
30s ribosomal subunit, trnas, mRNA and release factor rf2 fr crystal structure of the whole ribosomal complex. This file the 30s ribosomal subunit, trnas, mRNA and release factor r crystal structure of the whole ribosomal complex". The enti structure contains one 70s ribosome, trnas, mRNA and releas rf2 and is described in remark 400.
69. " " " " " "  = 2b9o:N *
30s ribosomal subunit, trnas and mRNA from a crystal structu whole ribosomal complex with a stop codon in the a-site. Th contains the 30s subunit, trnas and mRNA from a crystal str the whole ribosomal complex with a stop codon in the a-site described in remark 400.
70. " " " " " "  = 2e5l:N *
A snapshot of the 30s ribosomal subunit capturing mRNA via the shine- dalgarno interaction
71. " " " " " "  = 2f4v:N *
30s ribosome + designer antibiotic
72. " " " " " "  = 2hgi:Q *
Crystal structure of the 70s thermus thermophilus ribosome s the 16s 3'-end mimicks mRNA e and p codons. This entry 2hgi 30s ribosomal subunit. The 50s ribosomal subunit can be fou entry 2hgj.
73. " " " " " "  = 2hgp:Q *
Crystal structure of the 70s thermus thermophilus ribosome w translocated and rotated shine-dalgarno duplex. This entry contains 30s ribosomal subunit. The 50s ribosomal subunit c found in PDB entry 2hgq.
74. " " " " " "  = 2hgr:Q *
70s t.Th. Ribosome functional complex with mRNA and e- and p trnas at 4.5a. This entry 2hgr contains 30s ribosomal subun 50s ribosomal subunit can be found in PDB entry 2hgu.
75. " " " " " "  = 2hhh:N *
Crystal structure of kasugamycin bound to the 30s ribosomal
76. " " " " " "  = 2i1c:o *
Crystal structure of a 70s ribosome-tRNA complex reveals functional interactions and rearrangements. This file, 2i1c, contains the 30s ribosome subunit, two tRNA, and mRNA molecules. 50s ribosome subunit is in the file 1vs9
77. " " " " " "  = 2j00:N *
Structure of the thermus thermophilus 70s ribosome complexed with mRNA, tRNA and paromomycin (part 1 of 4). This file contains the 30s subunit, mRNA, a-, p- and e-site trnas and paromomycin for molecule i.
78. " " " " " "  = 2j02:N *
Structure of the thermus thermophilus 70s ribosome complexed with mRNA, tRNA and paromomycin (part 3 of 4) this file contains the 30s subunit, mRNA, a-, p- and e-site trnas and paromomycin for molecule ii.
79. " " " " " "  = 2jl5:N *
Insights into translational termination from the structure of rf2 bound to the ribosome (part 1 of 4). This file contains the 30s subunit.
80. " " " " " "  = 2jl7:N *
Insights into translational termination from the structure of rf2 bound to the ribosome (part 3 of 4). This file contains the 30s subunit.
81. " " " " " "  = 2ow8:o *
Crystal structure of a 70s ribosome-tRNA complex reveals fun interactions and rearrangements. This file, 2ow8, contains ribosome subunit, two tRNA, and mRNA molecules. 50s ribosom is in the file 1vsa.
82. " " " " " "  = 2qnh:o *
Interactions and dynamics of the shine-dalgarno helix in the ribosome. This file, 2qnh, contains the 30s ribosome subuni tRNA, and mRNA molecules. 50s ribosome subunit is in the fi
83. " " " " " "  = 2uu9:N *
Structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mRNA with a gug-codon in the a-site and paromomycin.
84. " " " " " "  = 2uua:N *
Structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mRNA with a guc-codon in the a-site and paromomycin.
85. " " " " " "  = 2uub:N *
Structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mRNA with a guu-codon in the a-site and paromomycin.
86. " " " " " "  = 2uuc:N *
Structure of the thermus thermophilus 30s ribosomal subunit complexed with a valine-asl with cmo5u in position 34 bound to an mRNA with a gua-codon in the a-site and paromomycin.
87. " " " " " "  = 2uxb:N *
Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA gggu in the context of the thermus thermophilus 30s subunit.
88. " " " " " "  = 2uxc:N *
Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA ucgu in the context of the thermus thermophilus 30s subunit.
89. " " " " " "  = 2uxd:N *
Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA cggg in the context of the thermus thermophilus 30s subunit.
90. " " " " " "  = 2v46:N *
Structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mRNA, asl-phe and tRNA-fmet (part 1 of 4). This file contains the 30s subunit, mRNA, p-site asl, e-site tRNA and rrf for molecule 1.
91. " " " " " "  = 2v48:N *
Structure of the ribosome recycling factor bound to the thermus thermophilus 70s ribosome with mRNA, asl-phe and tRNA-fmet (part 3 of 4). This file contains the 30s subunit, mRNA, p-site asl, e-site tRNA and rrf for molecule 2.
92. " " " " " "  = 2vqe:N *
Modified uridines with c5-methylene substituents at the first position of the tRNA anticodon stabilize u-g wobble pairing during decoding
93. " " " " " "  = 2vqf:N *
Modified uridines with c5-methylene substituents at the first position of the tRNA anticodon stabilize u-g wobble pairing during decoding
94. " " " " " "  = 2wdg:N *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a-site tRNA, deacylated p-site tRNA, and e-site tRNA. This file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule i.
95. " " " " " "  = 2wdh:N *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a-site tRNA, deacylated p-site tRNA, and e-site tRNA. This file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule ii.
96. " " " " " "  = 2wdk:N *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a- and p-site trnas, and e-site tRNA. This file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule i.
97. " " " " " "  = 2wdm:N *
Structure of the thermus thermophilus 70s ribosome in complex with mRNA, paromomycin, acylated a- and p-site trnas, and e-site tRNA. This file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule ii.
98. " " " " " "  = 2wh1:N *
Insights into translational termination from the structure of rf2 bound to the ribosome
99. " " " " " "  = 2wh3:N *
Insights into translational termination from the structure of rf2 bound to the ribosome). This file contains the 30s subunit.
100. " " " " " "  = 2wri:N *
The structure of the ribosome with elongation factor g trapped in the post-translocational state (part 1 of 4).
101. " " " " " "  = 2wrk:N *
The structure of the ribosome with elongation factor g trapped in the post-translocational state (part 3 of 4).
102. " " " " " "  = 2wrn:N *
The crystal structure of the 70s ribosome bound to ef-tu and tRNA (part 1 of 4).
103. " " " " " "  = 2wrq:N *
The crystal structure of the 70s ribosome bound to ef-tu and tRNA (part 3 of 4).
104. " " " " " "  = 2x9r:N *
Structure of the 70s ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release
105. " " " " " "  = 2x9t:N *
Structure of the 70s ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release
106. " " " " " "  = 2xfz:N *
Structure of cytotoxic domain of colicin e3 bound to the 70s ribosome (part 1 of 4)
107. " " " " " "  = 2xg1:N *
Structure of cytotoxic domain of colicin e3 bound to the 70s ribosome (part 3 of 4)
108. " " " " " "  = 2xqd:N *
The structure of ef-tu and aminoacyl-tRNA bound to the 70s ribosome with a gtp analog
109. " " " " " "  = 2xsy:N *
tRNA tranlocation on the 70s ribosome: the pre- translocational translocation intermediate ti(pre)
110. " " " " " "  = 2xuy:N *
tRNA translocation on the 70s ribosome: the post- translocational translocation intermediate ti(post)
111. " " " " " "  = 2y0u:N *
The crystal structure of ef-tu and a9c-tRNA-trp bound to a near-cognate codon on the 70s ribosome
112. " " " " " "  = 2y0w:N *
The crystal structure of ef-tu and a9c-tRNA-trp bound to a near-cognate codon on the 70s ribosome
113. " " " " " "  = 2y0y:N *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a near-cognate codon on the 70s ribosome
114. " " " " " "  = 2y10:N *
The crystal structure of ef-tu and trp-tRNA-trp bound to a cognate codon on the 70s ribosome.
115. " " " " " "  = 2y12:N *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a near-cognate codon on the 70s ribosome
116. " " " " " "  = 2y14:N *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a cognate codon on the 70s ribosome.
117. " " " " " "  = 2y16:N *
The crystal structure of ef-tu and g24a-tRNA-trp bound to a cognate codon on the 70s ribosome.
118. " " " " " "  = 2y18:N *
The crystal structure of ef-tu and trp-tRNA-trp bound to a cognate codon on the 70s ribosome.
119. " " " " " "  = 2zm6:N *
Crystal structure of the thermus thermophilus 30s ribosomal subunit
120. " " " " " "  = 3d5a:N *
Structural basis for translation termination on the 70s ribo file contains the 30s subunit, release factor 1 (rf1), two mRNA molecules of one 70s ribosome. The entire crystal stru contains two 70s ribosomes as described in remark 400.
121. " " " " " "  = 3d5c:N *
Structural basis for translation termination on the 70s ribo file contains the 30s subunit, release factor 1 (rf1), two mRNA molecules of the second 70s ribosome. The entire cryst structure contains two 70s ribosomes as described in remark
122. " " " " " "  = 3f1e:N *
Crystal structure of a translation termination complex forme release factor rf2. This file contains the 30s subunit, rf2 tRNA, and mRNA molecules of one 70s ribosome. The entire cr structure contains two 70s ribosomes as described in remark
123. " " " " " "  = 3f1g:N *
Crystal structure of a translation termination complex forme release factor rf2. This file contains the 30s subunit, rf2 tRNA, and mRNA molecules of the second 70s ribosome. The en crystal structure contains two 70s ribosomes as described i 400.
124. " " " " " "  = 3fic:N *
T. Thermophilus 70s ribosome in complex with mRNA, trnas and tu.Gdp.Kirromycin ternary complex, fitted to a 6.4 a cryo-e this file contains the 30s subunit and the ligands
125. " " " " " "  = 3huw:N *
Structure of ef-p bound to the 70s ribosome; this file conta 30s subunit, mRNA, p-site tRNA and ef-p for molecule i.
126. " " " " " "  = 3huy:N *
Structure of ef-p bound to the 70s ribosome; this file conta 30s subunit, mRNA, p-site tRNA and ef-p for molecule ii.
127. " " " " " "  = 3i8g:Q *
Elongation complex of the 70s ribosome with three trnas and entry 3i8g contains 30s ribosomal subnit.The 50s ribosomal can be found in PDB entry 3i8f. Molecule b in the same asym unit is deposited as 3i8g (30s) and 3i8f (50s).
128. " " " " " "  = 3i8h:Q *
Elongation complex of the 70s ribosome with three trnas and entry 3i8h contains 30s ribosomal subnit. The 50s ribosomal can be found in PDB entry 3i8i. Molecule a in the same asym unit is deposited as 3i8f (50s) and 3i8g (30s).
129. " " " " " "  = 3i9b:Q *
Initiation complex of 70s ribosome with two trnas and mRNA. 3i9b contains 30s ribosomal subunit of molecule b. The 50s subunit can be found in PDB entry 3i9c. Molecule a in the s asymmetric unit is deposited as 3i9d (30s) and 3i9e (50s)
130. " " " " " "  = 3i9d:Q *
Initiation complex of 70s ribosome with two trnas and mRNA. 3i9d contains 30s ribosomal subunit of molecule a. The 50s subunit can be found in PDB entry 3i9e. Molecule b in the s asymmetric unit is deposited as 3i9b (30s) and 3i9c (50s)
131. " " " " " "  = 3kiq:n *
Structure of rele nuclease bound to the 70s ribosome (precle state; part 1 of 4)
132. " " " " " "  = 3kis:n *
Structure of rele nuclease bound to the 70s ribosome (precle state; part 3 of 4)
133. " " " " " "  = 3kiu:n *
Structure of rele nuclease bound to the 70s ribosome (postcleavage state; part 1 of 4)
134. " " " " " "  = 3kix:n *
Structure of rele nuclease bound to the 70s ribosome (postcleavage state; part 3 of 4)
135. " " " " " "  = 3knh:N *
The structures of viomycin bound to the 70s ribosome. This f contains the 30s subunit for molecule i
136. " " " " " "  = 3knj:N *
The structures of viomycin bound to the 70s ribosome. This f contains the 30s subunit for molecule ii'
137. " " " " " "  = 3knl:N *
The structures of capreomycin bound to the 70s ribosome. Thi contains the 30s subunit for molecule i
138. " " " " " "  = 3knn:N *
The structures of capreomycin bound to the 70s ribosome. Thi contains the 30s subunit for molecule ii
139. " " " " " "  = 3mr8:N *
Recognition of the amber stop codon by release factor rf1. T 3mr8 contains 30s ribosomal subunit. The 50s ribosomal subu found in PDB entry 3ms1. Molecule b in the same asymmetric deposited as 3mrz (50s) and 3ms0 (30s).
140. " " " " " "  = 3ms0:N *
Recognition of the amber stop codon by release factor rf1. T 3ms0 contains 30s ribosomal subunit. The 50s ribosomal subu found in PDB entry 3mrz. Molecule a in the same asymmetric deposited as 3mr8 (30s) and 3ms1 (50s).
141. " " " " " "  = 3oge:N *
Structure of the thermus thermophilus ribosome complexed wit chloramphenicol. This file contains the 30s subunit of one ribosome. The entire crystal structure contains two 70s rib
142. " " " " " "  = 3ogy:N *
Structure of the thermus thermophilus ribosome complexed wit chloramphenicol. This file contains the 30s subunit of one ribosome. The entire crystal structure contains two 70s rib
143. " " " " " "  = 3ohc:N *
Structure of the thermus thermophilus ribosome complexed wit erythromycin. This file contains the 30s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
144. " " " " " "  = 3ohd:N *
Structure of the thermus thermophilus ribosome complexed wit erythromycin. This file contains the 30s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
145. " " " " " "  = 3ohy:N *
Structure of the thermus thermophilus 70s ribosome complexed azithromycin. This file contains the 30s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
146. " " " " " "  = 3oi0:N *
Structure of the thermus thermophilus 70s ribosome complexed azithromycin. This file contains the 30s subunit of one 70s the entire crystal structure contains two 70s ribosomes.
147. " " " " " "  = 3oi2:N *
Structure of the thermus thermophilus 70s ribosome complexed telithromycin. This file contains the 30s subunit of one 70 ribosome. The entire crystal structure contains two 70s rib
148. " " " " " "  = 3oi4:N *
Structure of the thermus thermophilus 70s ribosome complexed telithromycin. This file contains the 30s subunit of one 70 ribosome. The entire crystal structure contains two 70s rib
149. " " " " " "  = 3oto:N *
Crystal structure of the 30s ribosomal subunit from a ksga m thermus thermophilus (hb8)
150. " " " " " "  = 3pyn:N *
Crystal structure of a complex containing domain 3 from the ires RNA bound to the 70s ribosome. This file contains the subunit of the first 70s ribosome.
151. " " " " " "  = 3pyq:N *
Crystal structure of a complex containing domain 3 from the ires RNA bound to the 70s ribosome. This file contains the subunit of the second 70s ribosome.
152. " " " " " "  = 3pys:N *
Crystal structure of a complex containing domain 3 of crpv i RNA bound to the 70s ribosome. This file contains the 30s s the first 70s ribosome.
153. " " " " " "  = 3pyu:N *
Crystal structure of a complex containing domain 3 of crpv i RNA bound to the 70s ribosome. This file contains the 30s s the second 70s ribosome.
154. " " " " " "  = 3t1h:N *
Structure of the thermus thermophilus 30s ribosomal subunit with a human anti-codon stem loop (hasl) of transfer RNA ly (trnalys3) bound to an mRNA with an aaa-codon in the a-site paromomycin
155. " " " " " "  = 3t1y:N *
Structure of the thermus thermophilus 30s ribosomal subunit with a human anti-codon stem loop (hasl) of transfer RNA ly (trnalys3) bound to an mRNA with an aag-codon in the a-site paromomycin
156. " " " " " "  = 3tvf:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the cognate tRNA-leu complex
157. " " " " " "  = 3tvg:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the second 70s molecule in the asymmetric unit for the cognate tRNA-leu complex
158. " " " " " "  = 3uxs:N *
The structure of thermorubin in complex with the 70s ribosom thermus thermophilus. This file contains the 30s subunit of ribosome. The entire crystal structure contains two 70s rib
159. " " " " " "  = 3uxt:N *
The structure of thermorubin in complex with the 70s ribosom thermus thermophilus. This file contains the 30s subunit of ribosome. The entire crystal structure contains two 70s rib
160. " " " " " "  = 3uyd:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex
161. " " " " " "  = 3uyf:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex
162. " " " " " "  = 3uz3:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the first 70s molecule in the unit for the near-cognate tRNA-leu complex with paromomycin
163. " " " " " "  = 3uz4:Q *
Crystal structure analysis of ribosomal decoding. This entry the 30s ribosomal subunit of the second 70s molecule in the asymmetric unit for the near-cognate tRNA-leu complex with paromomycin.
164. " " " " " "  = 3v22:N *
Crystal structure of rmf bound to the 70s ribosome. This PDB contains coordinates for the 30s subunit with bound rmf of ribosome in the asu
165. " " " " " "  = 3v24:N *
Crystal structure of rmf bound to the 70s ribosome. This PDB contains coordinates for the 30s subunit with bound rmf of ribosome in the asu
166. " " " " " "  = 3v26:N *
Crystal structure of hpf bound to the 70s ribosome. This PDB contains coordinates for the 30s subunit with bound hpf of ribosome in the asu
167. " " " " " "  = 3v28:N *
Crystal structure of hpf bound to the 70s ribosome. This PDB contains coordinates for the 30s subunit with bound hpf of ribosome in the asu
168. " " " " " "  = 3v2c:N *
Crystal structure of yfia bound to the 70s ribosome. This pd contains coordinates for the 30s subunit with bound yfia of ribosome in the asu
169. " " " " " "  = 3v2e:N *
Crystal structure of yfia bound to the 70s ribosome. This pd contains coordinates for the 30s subunit with bound yfia of ribosome in the asu
170. " " " " " "  = 3v6u:N *
Crystal structure of the bacterial ribosome ram mutation g34 entry contains the 30s ribosomal subunit of the first 70s m the asymmetric unit
171. " " " " " "  = 3v6v:N *
Crystal structure of the bacterial ribosome ram mutation g34 entry contains the 30s ribosomal subunit of the second 70s in the asymmetric unit
172. " " " " " "  = 3zn7:N *
The crystal structure of agmatidine tRNA-ile2 bound to the 70s ribosome in the a and p site.
173. " " " " " "  = 3znd:N *
The crystal structure of agmatidine tRNA-ile2 bound to the 70s ribosome in the a and p site.
174. " " " " " "  = 3zvo:N *
Crystal structure of the hybrid state of ribosome in complex the guanosine triphosphatase release factor 3
175. " " " " " "  = 4abr:N *
Complex of smpb, a tmrna fragment and ef-tu-gdp-kirromycin with the 70s ribosome
176. " " " " " "  = 4aqy:N *
Structure of ribosome-apramycin complexes
177. " " " " " "  = 4b3m:N *
Crystal structure of the 30s ribosome in complex with compou
178. " " " " " "  = 4b3r:N *
Crystal structure of the 30s ribosome in complex with compou
179. " " " " " "  = 4b3s:N *
Crystal structure of the 30s ribosome in complex with compou
180. " " " " " "  = 4b3t:N *
Crystal structure of the 30s ribosome in complex with compou
181. " " " " " "  = 4b8f:N *
Crystal structure of 70s ribosome with both cognate trnas in and p sites representing an authentic elongation complex
182. " " " " " "  = 4b8h:N *
Crystal structure of 70s ribosome with both cognate trnas in and p sites representing an authentic elongation complex
183. " " " " " "  = 4btc:N *
Thermus thermophilus ribosome
184. " " " " " "  = 4byb:N *
Structure of thermus thermophilus 30s ribosome
185. " " " " " "  = 4byd:N *
Structure of thermus thermophilus 30s ribosome
186. " " " " " "  = 4cr1:N *
Thermus thermophilus ribosome
187. " " " " " "  = 4dr1:N *
Crystal structure of the apo 30s ribosomal subunit from ther thermophilus (hb8)
188. " " " " " "  = 4dr2:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with multiple copies of paromomycin molecules bound
189. " " " " " "  = 4dr3:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with streptomycin bound
190. " " " " " "  = 4dr4:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with codon, cognate transfer RNA anticodon stem-loo multiple copies of paromomycin molecules bound
191. " " " " " "  = 4dr5:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with codon, crystallographically disordered cognate RNA anticodon stem-loop and streptomycin bound
192. " " " " " "  = 4dr6:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with codon, near-cognate transfer RNA anticodon ste mismatched at the first codon position and streptomycin bou
193. " " " " " "  = 4dr7:N *
Crystal structure of the thermus thermophilus (hb8) 30s ribo subunit with codon, crystallographically disordered near-co transfer RNA anticodon stem-loop mismatched at the second c position, and streptomycin bound
194. " " " " " "  = 4duy:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, u13c
195. " " " " " "  = 4duz:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, u13c, bound with streptomycin
196. " " " " " "  = 4dv0:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, u20g
197. " " " " " "  = 4dv1:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, u20g, bound with streptomycin
198. " " " " " "  = 4dv2:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, c912a
199. " " " " " "  = 4dv3:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, c912a, bound with streptomycin
200. " " " " " "  = 4dv4:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, a914g
201. " " " " " "  = 4dv5:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, a914g, bound with streptomycin
202. " " " " " "  = 4dv6:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, a915g
203. " " " " " "  = 4dv7:N *
Crystal structure of the thermus thermophilus 30s ribosomal with a 16s rrna mutation, a915g, bound with streptomycin
204. " " " " " "  = 4ej9:N *
Crystal structure of the bacterial ribosome ram mutation g29 entry contains the 30s ribosomal subunit of the first 70s m the asymmetric unit
205. " " " " " "  = 4eja:N *
Crystal structure of the bacterial ribosome ram mutation g29 entry contains the 30s ribosomal subunit of the second 70s in the asymmetric unit
206. " " " " " "  = 4g5k:Q *
Crystal structure of the 70s ribosome with tetracycline. Thi contains the 30s subunit of molecule a.
207. " " " " " "  = 4g5m:Q *
Crystal structure of the 70s ribosome with tetracycline. Thi contains the 30s subunit of molecule b.
208. " " " " " "  = 4g5t:Q *
Crystal structure of the 70s ribosome with tigecycline. This contains the 30s subunit of molecule a.
209. " " " " " "  = 4g5v:Q *
Crystal structure of the 70s ribosome with tigecycline. This contains the 30s subunit of molecule b.
210. " " " " " "  = 4gkj:N *
Structure of the thermus thermophilus 30s ribosomal subunit with a human mitochondrial anticodon stem loop (asl) of tra methionine (trnamet) bound to an mRNA with an aug-codon in and paromomycin.
211. " " " " " "  = 4gkk:N *
Structure of the thermus thermophilus 30s ribosomal subunit with a human mitochondrial anticodon stem loop (asl) of tra methionine (trnamet) bound to an mRNA with an aua-codon in and paromomycin
212. " " " " " "  = 4ji0:N *
Crystal structure of 30s ribosomal subunit from thermus ther
213. " " " " " "  = 4ji1:N *
Crystal structure of 30s ribosomal subunit from thermus ther
214. " " " " " "  = 4ji2:N *
Crystal structure of 30s ribosomal subunit from thermus ther
215. " " " " " "  = 4ji3:N *
Crystal structure of 30s ribosomal subunit from thermus ther
216. " " " " " "  = 4ji4:N *
Crystal structure of 30s ribosomal subunit from thermus ther
217. " " " " " "  = 4ji5:N *
Crystal structure of 30s ribosomal subunit from thermus ther
218. " " " " " "  = 4ji6:N *
Crystal structure of 30s ribosomal subunit from thermus ther
219. " " " " " "  = 4ji7:N *
Crystal structure of 30s ribosomal subunit from thermus ther
220. " " " " " "  = 4ji8:N *
Crystal structure of 30s ribosomal subunit from thermus ther
221. " " " " " "  = 4juw:N *
Crystal structure of the ribosome bound to elongation factor guanosine triphosphatase state (this file contains the 30s
222. " " " " " "  = 4jv5:N *
Crystal structures of pseudouridinilated stop codons with as
223. " " " " " "  = 4jya:N *
Crystal structures of pseudouridinilated stop codons with as
224. " " " " " "  = 4k0k:N *
Crystal structure of the thermus thermophilus 30s ribosomal complexed with a serine-asl and mRNA containing a stop codo
225. " " " " " "  = 4k0l:N *
Crystal structure of thermus thermophilus 70s in complex wit and mRNA containing a pseudouridine in a stop codon
226. " " " " " "  = 4k0p:N *
Crystal structure of thermus thermophilus 70s containing trn mRNA stop codon with pseudouridine
227. " " " " " "  = 4kbt:N *
70s ribosome translocation intermediate gdpnp-ii containing factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains 30s ribosomal subunit a. The full asymmetric unit contains PDB entries 4kbu (50s subunit a), 4kbv (30s subuni 4kbw (50s subunit b).
228. " " " " " "  = 4kbv:N *
70s ribosome translocation intermediate gdpnp-ii containing factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains 30s ribosomal subunit b. The full asymmetric unit contains PDB entries 4kbw (50s subunit b), 4kbt (30s subuni 4kbu (50s subunit a).
229. " " " " " "  = 4kcy:N *
70s ribosome translocation intermediate gdpnp-i containing e factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains the 30s ribosomal subunit a. The 50s subunit a can in 4kcz. Molecule b in the same asymmetric unit is deposite (30s) and 4kd2 (50s)
230. " " " " " "  = 4kd0:N *
70s ribosome translocation intermediate gdpnp-i containing e factor efg/gdpnp, mRNA, and tRNA bound in the pe /E state. Contains the 30s ribosomal subunit b. The 50s subunit b can in 4kd2. Molecule a in the same asymmetric unit is deposite (30s) and 4kcz (50s)
231. " " " " " "  = 4kd8:N *
70s ribosome translocation intermediate fa-3.6a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 30s ribosomal subunit a. The 50s su can be found in 4kd9. Molecule b in the same asymmetric uni deposited as 4kda (30s) and 4kdb (50s).
232. " " " " " "  = 4kda:N *
70s ribosome translocation intermediate fa-3.6a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 30s ribosomal subunit b. The 50s su can be found in 4kdb. Molecule a in the same asymmetric uni deposited as 4kd8 (30s) and 4kd9 (50s).
233. " " " " " "  = 4kdg:N *
70s ribosome translocation intermediate fa-4.2a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 30s ribosomal subunit a. The 50s su can be found in 4kdh. Molecule b in the same asymmetric uni deposited as 4kdj (30s) and 4kdk (50s).
234. " " " " " "  = 4kdj:N *
70s ribosome translocation intermediate fa-4.2a containing e factor efg/fusidic acid/gdp, mRNA, and tRNA bound in the pe this entry contains the 30s ribosomal subunit b. The 50s su can be found in 4kdk. Molecule a in the same asymmetric uni deposited as 4kdg (30s) and 4kdh (50s).
235. " " " " " "  = 4kfh:N *
Crystal structure of the 70s ribosome bound with the q253p m release factor rf2. 30s of the a subunit
236. " " " " " "  = 4kfk:N *
Crystal structure of the 70s ribosome bound with the q253p m release factor rf2. 30s of the b subunit
237. " " " " " "  = 4khp:N *
Structure of the thermus thermophilus 30s ribosomal subunit with de-6-msa-pactamycin
238. " " " " " "  = 4kwz:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-g on the ribosome
239. " " " " " "  = 4kx1:N *
Crystal structure of frameshift suppressor tRNA sufa6 bound ccc-g on the ribosome
240. " " " " " "  = 4l6k:N *
Crystal structure of blasticidin s bound to thermus thermoph ribosome. This file contains the 30s subunit, tRNA and mRNA from the first 70s ribosome.
241. " " " " " "  = 4l6m:N *
Crystal structure of blasticidin s bound to thermus thermoph ribosome. This file contains the 30s subunit, tRNA and mRNA from the second 70s ribosome.
242. " " " " " "  = 4nvu:N *
Crystal structure of antibiotic dityromycin bound to 70s rib
243. " " " " " "  = 4nvw:N *
Crystal structure of antibiotic dityromycin bound to 70s rib
244. " " " " " "  = 4nvy:N *
Crystal structure of antibiotic ge82832 bound to 70s ribosom
245. " " " " " "  = 4nw0:N *
Crystal structure of antibiotic ge82832 bound to 70s ribosom
246. " " " " " "  = 4nxm:N *
Crystal structure of the 30s ribosomal subunit from a gidb ( mutant of thermus thermophilus (hb8)
247. " " " " " "  = 4nxn:N *
Crystal structure of the 30s ribosomal subunit from a gidb ( mutant of thermus thermophilus (hb8), bound with streptomyc
248. " " " " " "  = 4ox9:N *
Crystal structure of the aminoglycoside resistance methyltra npma bound to the 30s ribosomal subunit
249. " " " " " "  = 4qco:N *
Crystal structure of the thermus thermophilus 70s ribosome i attack state of peptide bond formation containing acylated substrates in the a and p sites. This entry contains the 30 of the second 70s ribosome in the asu.
250. 72 34.5% 29 88 113.2 25 2env:A Solution sturcture of the c4-type zinc finger domain from human peroxisome proliferator-activated receptor delta
251. 70 40.0% 25 87 110.5 35 1r8h:A * Comparison of the structure and DNA binding properties of the e2 proteins from an oncogenic and a non-oncogenic human papillomavirus
252. " " " " " "  = 2ayb:A *
Crystal structure of hpv6a e2 DNA binding domain bound to a pair DNA target
253. " " " " " "  = 2ayg:A *
Crystal structure of hpv6a e2 DNA binding domain bound to an 18 base pair DNA target
254. 71 37.1% 35 153 109.4 41 3qrz:B Crystal structure of native abscisic acid receptor pyl5 at 2 angstrom
255. 71 37.1% 35 154 109.3 41 4jdl:B Crystal structure of native abscisic acid receptor pyl5 at 2 angstrom
256. 69 28.6% 42 103 108.4 46 3nzn:A The crystal structure of the glutaredoxin from methanosarcin go1
257. 73 39.4% 33 366 108.2 47 2fln:A Binary complex of catalytic core of human DNA polymerase iot (template a)

Number of sequences: 257

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Min. seq. identity:   Min. seq. overlap   Max. E-value

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