Figure 7 - full size

 

Figure 7.
Fig. 7. Stereo views of the three-dimensional structures of the propeptide:subtilisin complexes. (a) The entire structure of the G56S-propeptide:S324A-subtilisin complex is superimposed on that of the Tk-propeptide:S324A-subtilisin complex (Protein Data Bank code 2Z30). For the structure of the G56S-propeptide:S324A-subtilisin complex, G56S-propeptide is in red and S324A-subtilisin is in green. Two active-site residues (Asp115 and His153) and Ala324, which is substituted for the active-site serine residue, are indicated by yellow stick models, in which the oxygen and nitrogen atoms are in red and blue, respectively. Seven Ca^2 + are shown in cyan spheres. N and C represent the N- and C-termini, respectively. The entire structure of the Tk-propeptide:S324A-subtilisin complex, including seven Ca^2 +, is in gray. (b–d) G56S-propeptide (b), G56E-propeptide (c), and G56W-propeptide (d) in the structures of the G56S-propeptide:S324A-subtilisin, G56E-propeptide:S324A-subtilisin, and G56W-propeptide:S324A-subtilisin complexes are superimposed on Tk-propeptide in the structure of the Tk-propeptide:S324A-subtilisin complex. The view direction is changed from (a), such that the mature domain is located behind the propeptide. The mutant and wild-type propeptides are in red and gray, respectively. Nine of the 11 residues that form a hydrophobic core and Ser56 (b), Glu56 (c), or Trp56 (d) are indicated by blue and yellow stick models, respectively. Two other core-forming residues are not shown because they are hidden.

The above figure is reprinted by permission from Elsevier: J Mol Biol (2007, 374, 1359-1373) copyright 2007.